Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.66□□□□□ -2.52
SHANK1Q9Y566 RNU7-171P-201ENST00000459581 62 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 MIR6874-201ENST00000635894 71 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 RNU6-315P-201ENST00000362666 107 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 RNU6-540P-201ENST00000384622 101 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 MIR3123-201ENST00000583417 75 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 RNA5SP26-201ENST00000362406 119 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 SNORA8.1-201ENST00000384250 140 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 RNA5SP89-201ENST00000410300 108 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 AC108019.1-201ENST00000512540 175 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 RNU6-267P-201ENST00000516714 103 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 RNU6-228P-201ENST00000362700 106 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-258P-201ENST00000390884 101 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-400P-201ENST00000391173 106 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-982P-201ENST00000516216 102 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 MIR8053-201ENST00000613344 75 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 AC091912.2-201ENST00000624798 167 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 MIR487B-201ENST00000385021 84 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-630P-201ENST00000391258 106 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 MIR548Q-201ENST00000408404 100 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 AC005520.4-201ENST00000604337 90 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-478P-201ENST00000363904 110 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-219P-201ENST00000364728 107 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-563P-201ENST00000364872 108 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-44P-201ENST00000384045 107 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-215P-201ENST00000365169 102 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-608P-201ENST00000383927 104 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 AC090616.4-201ENST00000448026 115 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 MIR4666B-201ENST00000578142 81 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 U2.7-201ENST00000619197 100 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-698P-201ENST00000363523 107 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 RNU6-34P-201ENST00000364874 107 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 RNA5SP86-201ENST00000390869 98 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 U7.5-201ENST00000517224 61 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 MIR4756-201ENST00000577874 78 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 U4.4-201ENST00000620626 117 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 RNY1P1-201ENST00000364372 112 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-695P-201ENST00000391157 104 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-402P-201ENST00000410678 103 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-168P-201ENST00000516189 101 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-645P-201ENST00000364649 106 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-294P-201ENST00000364999 102 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 SNORD18.1-201ENST00000363807 70 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-153P-201ENST00000364422 104 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-246P-201ENST00000384702 107 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-696P-201ENST00000390834 107 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-129P-201ENST00000391022 107 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 SNORD19-201ENST00000391191 68 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 MIR507-201ENST00000385234 94 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-980P-201ENST00000516925 103 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 MIR5588-201ENST00000581890 63 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 MIR548BB-201ENST00000626714 66 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 SNORD113.1-201ENST00000363280 73 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 MIR154-201ENST00000385243 84 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 MIR548AG1-201ENST00000579932 66 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 RNA5SP405-201ENST00000363059 114 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 RNU6-458P-201ENST00000384179 107 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 MIR548H1-201ENST00000408610 102 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 U6.58-201ENST00000613107 107 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 snoU13.10-201ENST00000459301 103 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 MIR3170-201ENST00000582699 77 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 SNORD1B-201ENST00000363091 84 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 RNA5SP173-201ENST00000364857 136 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 RNU6-70P-201ENST00000516438 60 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 MIR3139-201ENST00000579145 76 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 MIR466-201ENST00000580653 84 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 MIR548AM-201ENST00000584298 74 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 SNORD45.1-201ENST00000363181 77 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-841P-201ENST00000383872 107 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-49P-201ENST00000384256 107 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-820P-201ENST00000384273 107 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-518P-201ENST00000516056 96 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 MIR429-201ENST00000362106 83 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 MIR488-201ENST00000365739 83 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 SNORD45A-201ENST00000384512 84 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 MIR630-201ENST00000384957 97 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 MIR450A2-201ENST00000385022 100 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 396.3 ms