Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.66□□□□□ -2.52
SHANK1Q9Y566 RNU7-171P-201ENST00000459581 62 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 MIR6874-201ENST00000635894 71 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 RNU6-315P-201ENST00000362666 107 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 RNU6-540P-201ENST00000384622 101 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 MIR3123-201ENST00000583417 75 ntBASIC-0.67□□□□□ -2.52
SHANK1Q9Y566 RNA5SP26-201ENST00000362406 119 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 SNORA8.1-201ENST00000384250 140 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 RNA5SP89-201ENST00000410300 108 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 AC108019.1-201ENST00000512540 175 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 RNU6-267P-201ENST00000516714 103 ntBASIC-0.68□□□□□ -2.52
SHANK1Q9Y566 RNU6-228P-201ENST00000362700 106 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-258P-201ENST00000390884 101 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-400P-201ENST00000391173 106 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-982P-201ENST00000516216 102 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 MIR8053-201ENST00000613344 75 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 AC091912.2-201ENST00000624798 167 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 MIR487B-201ENST00000385021 84 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-630P-201ENST00000391258 106 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 MIR548Q-201ENST00000408404 100 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 AC005520.4-201ENST00000604337 90 ntBASIC-0.69□□□□□ -2.52
SHANK1Q9Y566 RNU6-478P-201ENST00000363904 110 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-219P-201ENST00000364728 107 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-563P-201ENST00000364872 108 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-44P-201ENST00000384045 107 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-215P-201ENST00000365169 102 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-608P-201ENST00000383927 104 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 AC090616.4-201ENST00000448026 115 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 MIR4666B-201ENST00000578142 81 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 U2.7-201ENST00000619197 100 ntBASIC-0.7□□□□□ -2.52
SHANK1Q9Y566 RNU6-698P-201ENST00000363523 107 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 RNU6-34P-201ENST00000364874 107 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 RNA5SP86-201ENST00000390869 98 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 U7.5-201ENST00000517224 61 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 MIR4756-201ENST00000577874 78 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 U4.4-201ENST00000620626 117 ntBASIC-0.71□□□□□ -2.52
SHANK1Q9Y566 RNY1P1-201ENST00000364372 112 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-695P-201ENST00000391157 104 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-402P-201ENST00000410678 103 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-168P-201ENST00000516189 101 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-645P-201ENST00000364649 106 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 RNU6-294P-201ENST00000364999 102 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.72□□□□□ -2.52
SHANK1Q9Y566 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 SNORD18.1-201ENST00000363807 70 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-153P-201ENST00000364422 104 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-246P-201ENST00000384702 107 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-696P-201ENST00000390834 107 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-129P-201ENST00000391022 107 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 SNORD19-201ENST00000391191 68 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 MIR507-201ENST00000385234 94 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 RNU6-980P-201ENST00000516925 103 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 MIR5588-201ENST00000581890 63 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 MIR548BB-201ENST00000626714 66 ntBASIC-0.73□□□□□ -2.53
SHANK1Q9Y566 SNORD113.1-201ENST00000363280 73 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 MIR154-201ENST00000385243 84 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 MIR548AG1-201ENST00000579932 66 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 RNA5SP405-201ENST00000363059 114 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 RNU6-458P-201ENST00000384179 107 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 MIR548H1-201ENST00000408610 102 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 U6.58-201ENST00000613107 107 ntBASIC-0.74□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 snoU13.10-201ENST00000459301 103 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 MIR3170-201ENST00000582699 77 ntBASIC-0.75□□□□□ -2.53
SHANK1Q9Y566 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 SNORD1B-201ENST00000363091 84 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 RNA5SP173-201ENST00000364857 136 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 RNU6-70P-201ENST00000516438 60 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 MIR3139-201ENST00000579145 76 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 MIR466-201ENST00000580653 84 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 MIR548AM-201ENST00000584298 74 ntBASIC-0.76□□□□□ -2.53
SHANK1Q9Y566 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 SNORD45.1-201ENST00000363181 77 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-841P-201ENST00000383872 107 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-49P-201ENST00000384256 107 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-820P-201ENST00000384273 107 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 RNU6-518P-201ENST00000516056 96 ntBASIC-0.77□□□□□ -2.53
SHANK1Q9Y566 MIR429-201ENST00000362106 83 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 MIR488-201ENST00000365739 83 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 SNORD45A-201ENST00000384512 84 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 MIR630-201ENST00000384957 97 ntBASIC-0.78□□□□□ -2.53
SHANK1Q9Y566 MIR450A2-201ENST00000385022 100 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms