Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-982P-201ENST00000516216 102 ntBASIC-1.69□□□□□ -2.68
SHANK3Q9BYB0 RNU6-81P-201ENST00000365608 104 ntBASIC-1.7□□□□□ -2.68
SHANK3Q9BYB0 RNU6-608P-201ENST00000383927 104 ntBASIC-1.7□□□□□ -2.68
SHANK3Q9BYB0 RNU6-540P-201ENST00000384622 101 ntBASIC-1.7□□□□□ -2.68
SHANK3Q9BYB0 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.7□□□□□ -2.68
SHANK3Q9BYB0 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.7□□□□□ -2.68
SHANK3Q9BYB0 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.7□□□□□ -2.68
SHANK3Q9BYB0 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.71□□□□□ -2.68
SHANK3Q9BYB0 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.71□□□□□ -2.68
SHANK3Q9BYB0 AL031737.1-201ENST00000450125 223 ntBASIC-1.71□□□□□ -2.68
SHANK3Q9BYB0 SNORD113.1-201ENST00000363280 73 ntBASIC-1.72□□□□□ -2.69
SHANK3Q9BYB0 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.72□□□□□ -2.69
SHANK3Q9BYB0 SNORD116-16-201ENST00000384533 92 ntBASIC-1.72□□□□□ -2.69
SHANK3Q9BYB0 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.72□□□□□ -2.69
SHANK3Q9BYB0 RNA5SP173-201ENST00000364857 136 ntBASIC-1.73□□□□□ -2.69
SHANK3Q9BYB0 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.73□□□□□ -2.69
SHANK3Q9BYB0 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.73□□□□□ -2.69
SHANK3Q9BYB0 AC120024.2-201ENST00000576526 175 ntBASIC-1.73□□□□□ -2.69
SHANK3Q9BYB0 RNU6-330P-201ENST00000363015 107 ntBASIC-1.74□□□□□ -2.69
SHANK3Q9BYB0 AC090425.1-201ENST00000610007 140 ntBASIC-1.74□□□□□ -2.69
SHANK3Q9BYB0 RNU6-668P-201ENST00000364180 107 ntBASIC-1.74□□□□□ -2.69
SHANK3Q9BYB0 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 RNU6-219P-201ENST00000364728 107 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 RNU6-497P-201ENST00000365316 104 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 RNU6-22P-201ENST00000384355 107 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 MIR3170-201ENST00000582699 77 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 MIR3133-201ENST00000583157 78 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 MIR548BB-201ENST00000626714 66 ntBASIC-1.75□□□□□ -2.69
SHANK3Q9BYB0 RNU6-247P-201ENST00000362636 107 ntBASIC-1.76□□□□□ -2.69
SHANK3Q9BYB0 RNU6-598P-201ENST00000364017 105 ntBASIC-1.76□□□□□ -2.69
SHANK3Q9BYB0 RNU6-402P-201ENST00000410678 103 ntBASIC-1.76□□□□□ -2.69
SHANK3Q9BYB0 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.77□□□□□ -2.69
SHANK3Q9BYB0 RNA5SP86-201ENST00000390869 98 ntBASIC-1.77□□□□□ -2.69
SHANK3Q9BYB0 RNU6-604P-201ENST00000390917 100 ntBASIC-1.77□□□□□ -2.69
SHANK3Q9BYB0 RNU6-267P-201ENST00000516714 103 ntBASIC-1.77□□□□□ -2.69
SHANK3Q9BYB0 U2.18-201ENST00000622185 84 ntBASIC-1.77□□□□□ -2.69
SHANK3Q9BYB0 RNU6-841P-201ENST00000383872 107 ntBASIC-1.78□□□□□ -2.69
SHANK3Q9BYB0 RNU6-209P-201ENST00000384118 107 ntBASIC-1.78□□□□□ -2.69
SHANK3Q9BYB0 MALAT1.1-201ENST00000618249 95 ntBASIC-1.78□□□□□ -2.69
SHANK3Q9BYB0 SNORA27.2-201ENST00000363365 126 ntBASIC-1.79□□□□□ -2.7
SHANK3Q9BYB0 RNU6-675P-201ENST00000384236 104 ntBASIC-1.79□□□□□ -2.7
SHANK3Q9BYB0 MIR520D-201ENST00000385002 87 ntBASIC-1.8□□□□□ -2.7
SHANK3Q9BYB0 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.8□□□□□ -2.7
SHANK3Q9BYB0 RNU7-151P-201ENST00000516930 53 ntBASIC-1.8□□□□□ -2.7
SHANK3Q9BYB0 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.81□□□□□ -2.7
SHANK3Q9BYB0 RNU6-995P-201ENST00000391244 107 ntBASIC-1.81□□□□□ -2.7
SHANK3Q9BYB0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.81□□□□□ -2.7
SHANK3Q9BYB0 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.82□□□□□ -2.7
SHANK3Q9BYB0 AL365222.1-201ENST00000614661 98 ntBASIC-1.82□□□□□ -2.7
SHANK3Q9BYB0 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.83□□□□□ -2.7
SHANK3Q9BYB0 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.83□□□□□ -2.7
SHANK3Q9BYB0 RNU6-542P-201ENST00000516405 103 ntBASIC-1.83□□□□□ -2.7
SHANK3Q9BYB0 MIR450A1-201ENST00000362262 91 ntBASIC-1.83□□□□□ -2.7
SHANK3Q9BYB0 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.83□□□□□ -2.7
SHANK3Q9BYB0 snosnR66.1-201ENST00000391095 99 ntBASIC-1.83□□□□□ -2.7
SHANK3Q9BYB0 RNU6-315P-201ENST00000362666 107 ntBASIC-1.84□□□□□ -2.7
SHANK3Q9BYB0 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.84□□□□□ -2.7
SHANK3Q9BYB0 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.84□□□□□ -2.7
SHANK3Q9BYB0 MIR548M-201ENST00000408260 86 ntBASIC-1.84□□□□□ -2.7
SHANK3Q9BYB0 SNORA63.4-201ENST00000362763 126 ntBASIC-1.85□□□□□ -2.71
SHANK3Q9BYB0 MIR154-201ENST00000385243 84 ntBASIC-1.85□□□□□ -2.71
SHANK3Q9BYB0 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.86□□□□□ -2.71
SHANK3Q9BYB0 SNORA41B-201ENST00000384785 128 ntBASIC-1.86□□□□□ -2.71
SHANK3Q9BYB0 MIR548AM-201ENST00000584298 74 ntBASIC-1.86□□□□□ -2.71
SHANK3Q9BYB0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.86□□□□□ -2.71
SHANK3Q9BYB0 SNORD18.1-201ENST00000363807 70 ntBASIC-1.87□□□□□ -2.71
SHANK3Q9BYB0 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.87□□□□□ -2.71
SHANK3Q9BYB0 MIR3123-201ENST00000583417 75 ntBASIC-1.87□□□□□ -2.71
SHANK3Q9BYB0 SNORD1B-201ENST00000363091 84 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 RNY1P1-201ENST00000364372 112 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 RNU6-669P-201ENST00000365575 107 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 SNORD45A-201ENST00000384512 84 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 RNU6-70P-201ENST00000516438 60 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 RNU6-980P-201ENST00000516925 103 ntBASIC-1.88□□□□□ -2.71
SHANK3Q9BYB0 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.89□□□□□ -2.71
SHANK3Q9BYB0 SNORD60-201ENST00000383903 83 ntBASIC-1.89□□□□□ -2.71
SHANK3Q9BYB0 AC005520.4-201ENST00000604337 90 ntBASIC-1.89□□□□□ -2.71
SHANK3Q9BYB0 MIR3671-201ENST00000580455 88 ntBASIC-1.9□□□□□ -2.71
SHANK3Q9BYB0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.9□□□□□ -2.71
SHANK3Q9BYB0 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.91□□□□□ -2.71
SHANK3Q9BYB0 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.91□□□□□ -2.71
SHANK3Q9BYB0 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.91□□□□□ -2.71
SHANK3Q9BYB0 MIR7978-201ENST00000636158 59 ntBASIC-1.91□□□□□ -2.71
SHANK3Q9BYB0 RNU6-563P-201ENST00000364872 108 ntBASIC-1.91□□□□□ -2.72
SHANK3Q9BYB0 RNU6-118P-201ENST00000516552 102 ntBASIC-1.91□□□□□ -2.72
SHANK3Q9BYB0 RNU6-979P-201ENST00000383896 107 ntBASIC-1.92□□□□□ -2.72
SHANK3Q9BYB0 RNU6-32P-201ENST00000383948 107 ntBASIC-1.92□□□□□ -2.72
SHANK3Q9BYB0 RNU6-13P-201ENST00000384248 107 ntBASIC-1.92□□□□□ -2.72
SHANK3Q9BYB0 RNU6-12P-201ENST00000384604 107 ntBASIC-1.92□□□□□ -2.72
SHANK3Q9BYB0 RNU6-41P-201ENST00000384741 107 ntBASIC-1.92□□□□□ -2.72
SHANK3Q9BYB0 RNU6-844P-201ENST00000517175 102 ntBASIC-1.92□□□□□ -2.72
SHANK3Q9BYB0 IGLL4P-201ENST00000614590 133 ntBASIC-1.92□□□□□ -2.72
SHANK3Q9BYB0 AC108019.1-201ENST00000512540 175 ntBASIC-1.93□□□□□ -2.72
SHANK3Q9BYB0 MIR4484-201ENST00000582855 83 ntBASIC-1.93□□□□□ -2.72
SHANK3Q9BYB0 MIR664A-201ENST00000626086 82 ntBASIC-1.93□□□□□ -2.72
SHANK3Q9BYB0 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 308 ms