Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MIR7978-201ENST00000636158 59 ntBASIC-3.99□□□□□ -3.05
CCDC42Q96M95 RNU6-686P-201ENST00000364839 107 ntBASIC-4.01□□□□□ -3.05
CCDC42Q96M95 MIR125B1-201ENST00000385236 88 ntBASIC-4.01□□□□□ -3.05
CCDC42Q96M95 MTND5P41-201ENST00000517498 206 ntBASIC-4.01□□□□□ -3.05
CCDC42Q96M95 Y_RNA.818-201ENST00000618813 71 ntBASIC-4.01□□□□□ -3.05
CCDC42Q96M95 MIR579-201ENST00000385221 98 ntBASIC-4.02□□□□□ -3.05
CCDC42Q96M95 Y_RNA.193-201ENST00000363979 102 ntBASIC-4.03□□□□□ -3.05
CCDC42Q96M95 Y_RNA.489-201ENST00000384410 101 ntBASIC-4.03□□□□□ -3.05
CCDC42Q96M95 SNORD116-21-201ENST00000384507 92 ntBASIC-4.03□□□□□ -3.05
CCDC42Q96M95 RNU6-738P-201ENST00000384531 106 ntBASIC-4.03□□□□□ -3.05
CCDC42Q96M95 MIR8053-201ENST00000613344 75 ntBASIC-4.04□□□□□ -3.06
CCDC42Q96M95 RNU6-172P-201ENST00000411000 93 ntBASIC-4.05□□□□□ -3.06
CCDC42Q96M95 RNU6-971P-201ENST00000516920 106 ntBASIC-4.05□□□□□ -3.06
CCDC42Q96M95 MIR4668-201ENST00000582284 70 ntBASIC-4.05□□□□□ -3.06
CCDC42Q96M95 RNY1P1-201ENST00000364372 112 ntBASIC-4.06□□□□□ -3.06
CCDC42Q96M95 RNU6-659P-201ENST00000516454 104 ntBASIC-4.06□□□□□ -3.06
CCDC42Q96M95 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.07□□□□□ -3.06
CCDC42Q96M95 RNU6-109P-201ENST00000516364 107 ntBASIC-4.07□□□□□ -3.06
CCDC42Q96M95 RNU6-184P-201ENST00000516514 107 ntBASIC-4.07□□□□□ -3.06
CCDC42Q96M95 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-4.07□□□□□ -3.06
CCDC42Q96M95 SNORD113.1-201ENST00000363280 73 ntBASIC-4.08□□□□□ -3.06
CCDC42Q96M95 RNU6-1191P-201ENST00000516799 107 ntBASIC-4.08□□□□□ -3.06
CCDC42Q96M95 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 RNY4P9-201ENST00000363194 97 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.290-201ENST00000364879 114 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 SNORD60-201ENST00000383903 83 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.647-201ENST00000459194 112 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.640-201ENST00000459296 112 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.803-201ENST00000614432 112 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.815-201ENST00000616655 112 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.795-201ENST00000619475 112 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 MIR1297-201ENST00000637311 77 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.827-201ENST00000638104 112 ntBASIC-4.09□□□□□ -3.06
CCDC42Q96M95 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.1□□□□□ -3.07
CCDC42Q96M95 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.11□□□□□ -3.07
CCDC42Q96M95 RNU6-402P-201ENST00000410678 103 ntBASIC-4.11□□□□□ -3.07
CCDC42Q96M95 AL353621.2-201ENST00000605340 133 ntBASIC-4.12□□□□□ -3.07
CCDC42Q96M95 RNU6-520P-201ENST00000384717 104 ntBASIC-4.13□□□□□ -3.07
CCDC42Q96M95 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.14□□□□□ -3.07
CCDC42Q96M95 Y_RNA.349-201ENST00000365406 102 ntBASIC-4.14□□□□□ -3.07
CCDC42Q96M95 RNU6-230P-201ENST00000362457 104 ntBASIC-4.15□□□□□ -3.07
CCDC42Q96M95 RNU6-974P-201ENST00000384099 108 ntBASIC-4.15□□□□□ -3.07
CCDC42Q96M95 MIR581-201ENST00000384895 96 ntBASIC-4.15□□□□□ -3.07
CCDC42Q96M95 Y_RNA.620-201ENST00000411009 88 ntBASIC-4.15□□□□□ -3.07
CCDC42Q96M95 RNU6-755P-201ENST00000364400 103 ntBASIC-4.16□□□□□ -3.08
CCDC42Q96M95 MIR548N-201ENST00000408742 75 ntBASIC-4.17□□□□□ -3.08
CCDC42Q96M95 RNU7-160P-201ENST00000516660 62 ntBASIC-4.17□□□□□ -3.08
CCDC42Q96M95 Y_RNA.204-201ENST00000364112 102 ntBASIC-4.18□□□□□ -3.08
CCDC42Q96M95 Y_RNA.443-201ENST00000384135 111 ntBASIC-4.18□□□□□ -3.08
CCDC42Q96M95 SNORA19-201ENST00000384737 128 ntBASIC-4.18□□□□□ -3.08
CCDC42Q96M95 MIR4484-201ENST00000582855 83 ntBASIC-4.18□□□□□ -3.08
CCDC42Q96M95 SNORA63.4-201ENST00000362763 126 ntBASIC-4.19□□□□□ -3.08
CCDC42Q96M95 MIR4503-201ENST00000582187 83 ntBASIC-4.19□□□□□ -3.08
CCDC42Q96M95 Y_RNA.291-201ENST00000364886 113 ntBASIC-4.2□□□□□ -3.08
CCDC42Q96M95 RNU6-554P-201ENST00000410466 106 ntBASIC-4.2□□□□□ -3.08
CCDC42Q96M95 Y_RNA.812-201ENST00000610788 101 ntBASIC-4.2□□□□□ -3.08
CCDC42Q96M95 Y_RNA.784-201ENST00000613803 101 ntBASIC-4.2□□□□□ -3.08
CCDC42Q96M95 Y_RNA.787-201ENST00000616522 101 ntBASIC-4.2□□□□□ -3.08
CCDC42Q96M95 Y_RNA.780-201ENST00000617336 101 ntBASIC-4.2□□□□□ -3.08
CCDC42Q96M95 Y_RNA.801-201ENST00000619005 101 ntBASIC-4.2□□□□□ -3.08
CCDC42Q96M95 Y_RNA.186-201ENST00000363899 92 ntBASIC-4.21□□□□□ -3.08
CCDC42Q96M95 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.21□□□□□ -3.08
CCDC42Q96M95 RNU7-200P-201ENST00000516105 62 ntBASIC-4.21□□□□□ -3.08
CCDC42Q96M95 MIR202-201ENST00000362219 110 ntBASIC-4.22□□□□□ -3.08
CCDC42Q96M95 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.22□□□□□ -3.08
CCDC42Q96M95 RNU6-106P-201ENST00000384405 107 ntBASIC-4.22□□□□□ -3.08
CCDC42Q96M95 RNU6-649P-201ENST00000384463 107 ntBASIC-4.22□□□□□ -3.08
CCDC42Q96M95 SNORD45A-201ENST00000384512 84 ntBASIC-4.22□□□□□ -3.08
CCDC42Q96M95 RNU6-380P-201ENST00000410207 107 ntBASIC-4.22□□□□□ -3.08
CCDC42Q96M95 RNU6-497P-201ENST00000365316 104 ntBASIC-4.23□□□□□ -3.09
CCDC42Q96M95 SNORD116-22-201ENST00000384430 92 ntBASIC-4.23□□□□□ -3.09
CCDC42Q96M95 Y_RNA.513-201ENST00000384522 100 ntBASIC-4.24□□□□□ -3.09
CCDC42Q96M95 MIR548BB-201ENST00000626714 66 ntBASIC-4.24□□□□□ -3.09
CCDC42Q96M95 RNU6-828P-201ENST00000364876 107 ntBASIC-4.25□□□□□ -3.09
CCDC42Q96M95 RNU6-219P-201ENST00000364728 107 ntBASIC-4.26□□□□□ -3.09
CCDC42Q96M95 Y_RNA.313-201ENST00000365095 103 ntBASIC-4.26□□□□□ -3.09
CCDC42Q96M95 Y_RNA.397-201ENST00000383950 98 ntBASIC-4.26□□□□□ -3.09
CCDC42Q96M95 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.26□□□□□ -3.09
CCDC42Q96M95 RNY4-201ENST00000516507 96 ntBASIC-4.26□□□□□ -3.09
CCDC42Q96M95 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.27□□□□□ -3.09
CCDC42Q96M95 RNU6-196P-201ENST00000384315 107 ntBASIC-4.27□□□□□ -3.09
CCDC42Q96M95 SNORA17.4-201ENST00000391287 132 ntBASIC-4.27□□□□□ -3.09
CCDC42Q96M95 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-4.27□□□□□ -3.09
CCDC42Q96M95 RNU6-789P-201ENST00000517105 102 ntBASIC-4.27□□□□□ -3.09
CCDC42Q96M95 RNU6-797P-201ENST00000363101 109 ntBASIC-4.28□□□□□ -3.09
CCDC42Q96M95 SNORA63-201ENST00000363450 132 ntBASIC-4.28□□□□□ -3.09
CCDC42Q96M95 MIR2052-201ENST00000636055 55 ntBASIC-4.28□□□□□ -3.09
CCDC42Q96M95 RNU6-379P-201ENST00000363813 104 ntBASIC-4.29□□□□□ -3.1
CCDC42Q96M95 RNU6-141P-201ENST00000410499 105 ntBASIC-4.29□□□□□ -3.1
CCDC42Q96M95 RNU6-361P-201ENST00000364454 107 ntBASIC-4.3□□□□□ -3.1
CCDC42Q96M95 RNU6-886P-201ENST00000384319 105 ntBASIC-4.3□□□□□ -3.1
CCDC42Q96M95 Y_RNA.629-201ENST00000411368 105 ntBASIC-4.3□□□□□ -3.1
CCDC42Q96M95 Y_RNA.519-201ENST00000384553 102 ntBASIC-4.32□□□□□ -3.1
CCDC42Q96M95 SNX3P1Y-201ENST00000615757 176 ntBASIC-4.32□□□□□ -3.1
CCDC42Q96M95 SNORD116-14-201ENST00000383894 92 ntBASIC-4.33□□□□□ -3.1
CCDC42Q96M95 SNORD116-17-201ENST00000383929 92 ntBASIC-4.33□□□□□ -3.1
CCDC42Q96M95 SNORD116-15-201ENST00000384445 92 ntBASIC-4.33□□□□□ -3.1
CCDC42Q96M95 SNORD116-19-201ENST00000384729 92 ntBASIC-4.33□□□□□ -3.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms