Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 SNORA40-201ENST00000388090 126 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.657-201ENST00000515983 102 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 RNU6-804P-201ENST00000384286 107 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 MIR519C-201ENST00000385053 87 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.53□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.53□□□□□ -2.5
SYNE1Q8NF91 RNU6-463P-201ENST00000384340 107 ntBASIC-0.53□□□□□ -2.5
SYNE1Q8NF91 SNORD116-22-201ENST00000384430 92 ntBASIC-0.53□□□□□ -2.5
SYNE1Q8NF91 RNU6-361P-201ENST00000364454 107 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 MIR1302-3-201ENST00000408128 138 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 RNU6-887P-201ENST00000410660 100 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 RNU6-659P-201ENST00000516454 104 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 AP002795.1-201ENST00000534879 84 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 MIR4795-201ENST00000584182 89 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 RNU6-109P-201ENST00000516364 107 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 RNU6-184P-201ENST00000516514 107 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 SNORD58C-201ENST00000365223 64 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 RNU6-574P-201ENST00000384265 107 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 SNORA8.1-201ENST00000384250 140 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 RNY4P18-201ENST00000391107 89 ntBASIC-0.54□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU7-200P-201ENST00000516105 62 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU6-982P-201ENST00000516216 102 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 MIR548W-201ENST00000581970 74 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU6-604P-201ENST00000390917 100 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU6-554P-201ENST00000410466 106 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 U6.97-201ENST00000636904 101 ntBASIC-0.55□□□□□ -2.5
SYNE1Q8NF91 RNU6-766P-201ENST00000362478 107 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 SNORA63-201ENST00000363450 132 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-388P-201ENST00000517012 105 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-389P-201ENST00000517048 105 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-738P-201ENST00000384531 106 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 AC008737.2-201ENST00000599446 118 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 MIR7110-201ENST00000612638 86 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-200P-201ENST00000364743 107 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-523P-201ENST00000516304 54 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-379P-201ENST00000363813 104 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 MIR520D-201ENST00000385002 87 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 MIR548X2-201ENST00000579776 100 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 U7.3-201ENST00000616123 62 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 MIR3914-2-201ENST00000637339 95 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 MIR568-201ENST00000385036 95 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNY4P25-201ENST00000459254 96 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-834P-201ENST00000362367 110 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNY1P1-201ENST00000364372 112 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 MT-TG-201ENST00000387429 68 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-907P-201ENST00000390924 102 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-995P-201ENST00000391244 107 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-303P-201ENST00000517091 106 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 MIR5693-201ENST00000577722 73 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 AL359920.1-201ENST00000618332 176 ntBASIC-0.56□□□□□ -2.5
SYNE1Q8NF91 RNU6-675P-201ENST00000384236 104 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 MIR4801-201ENST00000582704 82 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 SNORD116-21-201ENST00000384507 92 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-598P-201ENST00000364017 105 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-649P-201ENST00000384463 107 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 MIR590-201ENST00000385008 97 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-795P-201ENST00000516323 103 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-633P-201ENST00000362612 103 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 SNORA41B-201ENST00000384785 128 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 AC093729.1-201ENST00000513074 128 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-92P-201ENST00000605893 104 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNY4P10-201ENST00000365571 96 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-300P-201ENST00000459080 104 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-940P-201ENST00000363433 104 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-587P-201ENST00000391282 106 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 RNU6-844P-201ENST00000517175 102 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 MIR3675-201ENST00000583661 73 ntBASIC-0.57□□□□□ -2.5
SYNE1Q8NF91 SNORD113.1-201ENST00000363280 73 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-694P-201ENST00000364071 147 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-797P-201ENST00000363101 109 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms