Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU7-61P-201ENST00000515897 61 ntBASIC-5.6□□□□□ -3.31
LINC00643Q86TS7 RNU6-1325P-201ENST00000364905 105 ntBASIC-5.62□□□□□ -3.31
LINC00643Q86TS7 RNU6-1227P-201ENST00000383981 107 ntBASIC-5.62□□□□□ -3.31
LINC00643Q86TS7 SNORA40B-201ENST00000385573 128 ntBASIC-5.62□□□□□ -3.31
LINC00643Q86TS7 RNU6-904P-201ENST00000516206 101 ntBASIC-5.64□□□□□ -3.31
LINC00643Q86TS7 RNU6-92P-201ENST00000605893 104 ntBASIC-5.64□□□□□ -3.31
LINC00643Q86TS7 Y_RNA.17-201ENST00000362433 111 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 Y_RNA.137-201ENST00000363455 112 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 Y_RNA.532-201ENST00000384590 113 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 TMSB4XP3-201ENST00000445144 114 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 RNU6-1211P-201ENST00000459179 105 ntBASIC-5.65□□□□□ -3.31
LINC00643Q86TS7 AC093729.1-201ENST00000513074 128 ntBASIC-5.66□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.680-201ENST00000516441 93 ntBASIC-5.66□□□□□ -3.32
LINC00643Q86TS7 U6.104-201ENST00000637979 90 ntBASIC-5.66□□□□□ -3.32
LINC00643Q86TS7 RNU6-713P-201ENST00000384761 107 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 RNU6-162P-201ENST00000516228 103 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 MIR4484-201ENST00000582855 83 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 MIR1297-201ENST00000637311 77 ntBASIC-5.67□□□□□ -3.32
LINC00643Q86TS7 SNORA63-201ENST00000363450 132 ntBASIC-5.68□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.586-201ENST00000391146 98 ntBASIC-5.69□□□□□ -3.32
LINC00643Q86TS7 MTATP8P2-201ENST00000435212 202 ntBASIC-5.69□□□□□ -3.32
LINC00643Q86TS7 MIRLET7A1-201ENST00000362295 80 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 RNU6-718P-201ENST00000516166 105 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 SNORA81.3-201ENST00000517283 198 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 AC062037.1-201ENST00000605302 128 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 AP001318.4-201ENST00000616637 121 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.778-201ENST00000620203 90 ntBASIC-5.7□□□□□ -3.32
LINC00643Q86TS7 RNU6-633P-201ENST00000362612 103 ntBASIC-5.71□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.579-201ENST00000390939 94 ntBASIC-5.71□□□□□ -3.32
LINC00643Q86TS7 U7.3-201ENST00000616123 62 ntBASIC-5.71□□□□□ -3.32
LINC00643Q86TS7 Y_RNA.70-201ENST00000362886 110 ntBASIC-5.72□□□□□ -3.33
LINC00643Q86TS7 RNU6-1020P-201ENST00000363684 107 ntBASIC-5.72□□□□□ -3.33
LINC00643Q86TS7 RNU6-659P-201ENST00000516454 104 ntBASIC-5.72□□□□□ -3.33
LINC00643Q86TS7 SNORD115-45-201ENST00000391078 81 ntBASIC-5.73□□□□□ -3.33
LINC00643Q86TS7 RNU6-1161P-201ENST00000516176 102 ntBASIC-5.73□□□□□ -3.33
LINC00643Q86TS7 AL157777.2-201ENST00000258070 137 ntBASIC-5.74□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.43-201ENST00000362670 111 ntBASIC-5.74□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.158-201ENST00000363651 101 ntBASIC-5.74□□□□□ -3.33
LINC00643Q86TS7 SNORD60.1-201ENST00000362451 73 ntBASIC-5.75□□□□□ -3.33
LINC00643Q86TS7 RNU6-1135P-201ENST00000411083 103 ntBASIC-5.75□□□□□ -3.33
LINC00643Q86TS7 RNU6-742P-201ENST00000365289 107 ntBASIC-5.76□□□□□ -3.33
LINC00643Q86TS7 MIR656-201ENST00000385224 78 ntBASIC-5.76□□□□□ -3.33
LINC00643Q86TS7 AC139453.2-201ENST00000487255 133 ntBASIC-5.76□□□□□ -3.33
LINC00643Q86TS7 RNU6-772P-201ENST00000516042 105 ntBASIC-5.77□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.219-201ENST00000364232 113 ntBASIC-5.78□□□□□ -3.33
LINC00643Q86TS7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-5.78□□□□□ -3.33
LINC00643Q86TS7 MIR548AI-201ENST00000579940 88 ntBASIC-5.78□□□□□ -3.33
LINC00643Q86TS7 Y_RNA.459-201ENST00000384251 102 ntBASIC-5.79□□□□□ -3.34
LINC00643Q86TS7 RNU6-542P-201ENST00000516405 103 ntBASIC-5.79□□□□□ -3.34
LINC00643Q86TS7 Y_RNA.382-201ENST00000365672 114 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 RNU6-196P-201ENST00000384315 107 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 RNU6-1340P-201ENST00000384438 107 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 AC139792.2-201ENST00000624218 587 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 MIR3974-201ENST00000637126 96 ntBASIC-5.8□□□□□ -3.34
LINC00643Q86TS7 RNU6-854P-201ENST00000364036 107 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 RNU6-1124P-201ENST00000384169 107 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 MIR548F1-201ENST00000408667 84 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 MTND3P3-201ENST00000505004 126 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 SNORA40.16-201ENST00000517238 121 ntBASIC-5.81□□□□□ -3.34
LINC00643Q86TS7 SNORD58.1-201ENST00000391313 66 ntBASIC-5.83□□□□□ -3.34
LINC00643Q86TS7 AC022559.1-201ENST00000520905 205 ntBASIC-5.83□□□□□ -3.34
LINC00643Q86TS7 Y_RNA.107-201ENST00000363190 121 ntBASIC-5.84□□□□□ -3.34
LINC00643Q86TS7 MT-TL1-201ENST00000386347 75 ntBASIC-5.84□□□□□ -3.34
LINC00643Q86TS7 Y_RNA.202-201ENST00000364083 110 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 Y_RNA.272-201ENST00000364696 102 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 SNORA33.2-201ENST00000365413 134 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 SNORD116-24-201ENST00000384549 92 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 RNU6-380P-201ENST00000410207 107 ntBASIC-5.85□□□□□ -3.35
LINC00643Q86TS7 AC141273.2-201ENST00000618989 130 ntBASIC-5.86□□□□□ -3.35
LINC00643Q86TS7 MIR4668-201ENST00000582284 70 ntBASIC-5.87□□□□□ -3.35
LINC00643Q86TS7 MIR664A-201ENST00000626086 82 ntBASIC-5.87□□□□□ -3.35
LINC00643Q86TS7 RNU6-895P-201ENST00000384125 103 ntBASIC-5.88□□□□□ -3.35
LINC00643Q86TS7 MIR8062-201ENST00000621515 85 ntBASIC-5.88□□□□□ -3.35
LINC00643Q86TS7 Y_RNA.717-201ENST00000517106 92 ntBASIC-5.89□□□□□ -3.35
LINC00643Q86TS7 MIR548X2-201ENST00000579776 100 ntBASIC-5.89□□□□□ -3.35
LINC00643Q86TS7 Y_RNA.218-201ENST00000364218 104 ntBASIC-5.91□□□□□ -3.36
LINC00643Q86TS7 MIR124-1-201ENST00000385275 85 ntBASIC-5.91□□□□□ -3.36
LINC00643Q86TS7 RNU7-119P-201ENST00000459279 63 ntBASIC-5.91□□□□□ -3.36
LINC00643Q86TS7 Y_RNA.260-201ENST00000364628 101 ntBASIC-5.92□□□□□ -3.36
LINC00643Q86TS7 RNU4-71P-201ENST00000516258 113 ntBASIC-5.92□□□□□ -3.36
LINC00643Q86TS7 Y_RNA.93-201ENST00000363066 109 ntBASIC-5.93□□□□□ -3.36
LINC00643Q86TS7 RNU6-665P-201ENST00000384639 107 ntBASIC-5.93□□□□□ -3.36
LINC00643Q86TS7 MIR590-201ENST00000385008 97 ntBASIC-5.93□□□□□ -3.36
LINC00643Q86TS7 RNA5SP224-201ENST00000365069 126 ntBASIC-5.94□□□□□ -3.36
LINC00643Q86TS7 SNORD45C-201ENST00000383893 79 ntBASIC-5.94□□□□□ -3.36
LINC00643Q86TS7 MIR4680-201ENST00000580906 66 ntBASIC-5.94□□□□□ -3.36
LINC00643Q86TS7 RNU6-1107P-201ENST00000364817 104 ntBASIC-5.96□□□□□ -3.36
LINC00643Q86TS7 Y_RNA.206-201ENST00000364136 102 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.240-201ENST00000364469 95 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 SNORD42.2-201ENST00000365570 69 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 AC072026.1-201ENST00000605023 201 ntBASIC-5.97□□□□□ -3.37
LINC00643Q86TS7 RNY3P1-201ENST00000365085 102 ntBASIC-5.98□□□□□ -3.37
LINC00643Q86TS7 RNU6-1241P-201ENST00000384536 107 ntBASIC-5.99□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.620-201ENST00000411009 88 ntBASIC-6□□□□□ -3.37
LINC00643Q86TS7 RNU6-419P-201ENST00000517030 63 ntBASIC-6□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.20-201ENST00000362479 113 ntBASIC-6.01□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.544-201ENST00000384650 113 ntBASIC-6.01□□□□□ -3.37
LINC00643Q86TS7 SNORD33.1-201ENST00000516213 88 ntBASIC-6.01□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.194-201ENST00000363985 102 ntBASIC-6.02□□□□□ -3.37
LINC00643Q86TS7 Y_RNA.290-201ENST00000364879 114 ntBASIC-6.02□□□□□ -3.37
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms