Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.01□□□□□ -2.41
UBE3DQ7Z6J8 AL590491.3-201ENST00000610731 82 ntBASIC-0.01□□□□□ -2.41
UBE3DQ7Z6J8 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
UBE3DQ7Z6J8 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.02□□□□□ -2.41
UBE3DQ7Z6J8 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.02□□□□□ -2.41
UBE3DQ7Z6J8 RNU6-828P-201ENST00000364876 107 ntBASIC-0.02□□□□□ -2.41
UBE3DQ7Z6J8 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.02□□□□□ -2.41
UBE3DQ7Z6J8 MIR193B-201ENST00000384907 83 ntBASIC-0.02□□□□□ -2.41
UBE3DQ7Z6J8 MIR124-2-201ENST00000385081 109 ntBASIC-0.02□□□□□ -2.41
UBE3DQ7Z6J8 RNU6-980P-201ENST00000516925 103 ntBASIC-0.02□□□□□ -2.41
UBE3DQ7Z6J8 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
UBE3DQ7Z6J8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
UBE3DQ7Z6J8 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.03□□□□□ -2.41
UBE3DQ7Z6J8 MIR330-201ENST00000362196 94 ntBASIC-0.04□□□□□ -2.42
UBE3DQ7Z6J8 MIR579-201ENST00000385221 98 ntBASIC-0.04□□□□□ -2.42
UBE3DQ7Z6J8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
UBE3DQ7Z6J8 RNU6-419P-201ENST00000517030 63 ntBASIC-0.04□□□□□ -2.42
UBE3DQ7Z6J8 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.05□□□□□ -2.42
UBE3DQ7Z6J8 SNORD4A-201ENST00000459174 72 ntBASIC-0.05□□□□□ -2.42
UBE3DQ7Z6J8 MIR7111-201ENST00000619751 72 ntBASIC-0.05□□□□□ -2.42
UBE3DQ7Z6J8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.05□□□□□ -2.42
UBE3DQ7Z6J8 RNU4-33P-201ENST00000364316 85 ntBASIC-0.06□□□□□ -2.42
UBE3DQ7Z6J8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.06□□□□□ -2.42
UBE3DQ7Z6J8 MIR329-2-201ENST00000385029 84 ntBASIC-0.06□□□□□ -2.42
UBE3DQ7Z6J8 MIR1273G-201ENST00000577677 100 ntBASIC-0.06□□□□□ -2.42
UBE3DQ7Z6J8 MIR518B-201ENST00000385127 83 ntBASIC-0.07□□□□□ -2.42
UBE3DQ7Z6J8 SNORD38.3-201ENST00000516599 73 ntBASIC-0.09□□□□□ -2.42
UBE3DQ7Z6J8 MIR5190-201ENST00000581537 80 ntBASIC-0.09□□□□□ -2.42
UBE3DQ7Z6J8 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.1□□□□□ -2.43
UBE3DQ7Z6J8 MIR1197-201ENST00000408818 88 ntBASIC-0.1□□□□□ -2.43
UBE3DQ7Z6J8 MIR8087-201ENST00000612745 78 ntBASIC-0.1□□□□□ -2.43
UBE3DQ7Z6J8 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.11□□□□□ -2.43
UBE3DQ7Z6J8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.11□□□□□ -2.43
UBE3DQ7Z6J8 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.11□□□□□ -2.43
UBE3DQ7Z6J8 SNORD18.2-201ENST00000459604 70 ntBASIC-0.11□□□□□ -2.43
UBE3DQ7Z6J8 RNA5SP330-201ENST00000517096 96 ntBASIC-0.11□□□□□ -2.43
UBE3DQ7Z6J8 MIR2909-201ENST00000617113 69 ntBASIC-0.11□□□□□ -2.43
UBE3DQ7Z6J8 SNORD45.2-201ENST00000363552 72 ntBASIC-0.12□□□□□ -2.43
UBE3DQ7Z6J8 RNA5SP63-201ENST00000391225 112 ntBASIC-0.12□□□□□ -2.43
UBE3DQ7Z6J8 MIR3170-201ENST00000582699 77 ntBASIC-0.12□□□□□ -2.43
UBE3DQ7Z6J8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.12□□□□□ -2.43
UBE3DQ7Z6J8 SNORA26.4-201ENST00000391188 123 ntBASIC-0.13□□□□□ -2.43
UBE3DQ7Z6J8 MIR4788-201ENST00000639104 80 ntBASIC-0.13□□□□□ -2.43
UBE3DQ7Z6J8 SNORD115-33-201ENST00000363723 82 ntBASIC-0.14□□□□□ -2.43
UBE3DQ7Z6J8 MIR204-201ENST00000385200 110 ntBASIC-0.14□□□□□ -2.43
UBE3DQ7Z6J8 SNORD75.1-201ENST00000408373 60 ntBASIC-0.14□□□□□ -2.43
UBE3DQ7Z6J8 AL451105.1-201ENST00000450005 189 ntBASIC-0.14□□□□□ -2.43
UBE3DQ7Z6J8 RNU6-753P-201ENST00000363926 107 ntBASIC-0.15□□□□□ -2.43
UBE3DQ7Z6J8 SNORD22.1-201ENST00000516331 125 ntBASIC-0.15□□□□□ -2.43
UBE3DQ7Z6J8 RNU6-247P-201ENST00000362636 107 ntBASIC-0.16□□□□□ -2.44
UBE3DQ7Z6J8 AL353691.2-201ENST00000443795 59 ntBASIC-0.16□□□□□ -2.44
UBE3DQ7Z6J8 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.17□□□□□ -2.44
UBE3DQ7Z6J8 MIR548Q-201ENST00000408404 100 ntBASIC-0.17□□□□□ -2.44
UBE3DQ7Z6J8 RNA5SP480-201ENST00000516840 109 ntBASIC-0.17□□□□□ -2.44
UBE3DQ7Z6J8 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.17□□□□□ -2.44
UBE3DQ7Z6J8 SNORD19-201ENST00000391191 68 ntBASIC-0.18□□□□□ -2.44
UBE3DQ7Z6J8 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
UBE3DQ7Z6J8 MIR3179-1-201ENST00000578940 84 ntBASIC-0.19□□□□□ -2.44
UBE3DQ7Z6J8 MIR3179-2-201ENST00000579107 84 ntBASIC-0.19□□□□□ -2.44
UBE3DQ7Z6J8 MIR3179-3-201ENST00000579566 84 ntBASIC-0.19□□□□□ -2.44
UBE3DQ7Z6J8 MIR3179-4-201ENST00000617599 84 ntBASIC-0.19□□□□□ -2.44
UBE3DQ7Z6J8 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.2□□□□□ -2.44
UBE3DQ7Z6J8 SNORD63.2-201ENST00000516303 64 ntBASIC-0.2□□□□□ -2.44
UBE3DQ7Z6J8 AC021146.6-201ENST00000514659 117 ntBASIC-0.22□□□□□ -2.44
UBE3DQ7Z6J8 RNU4-88P-201ENST00000411220 86 ntBASIC-0.23□□□□□ -2.45
UBE3DQ7Z6J8 MIR5683-201ENST00000636514 76 ntBASIC-0.24□□□□□ -2.45
UBE3DQ7Z6J8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.25□□□□□ -2.45
UBE3DQ7Z6J8 MIR1468-201ENST00000410600 86 ntBASIC-0.25□□□□□ -2.45
UBE3DQ7Z6J8 AP000533.3-201ENST00000447704 118 ntBASIC-0.25□□□□□ -2.45
UBE3DQ7Z6J8 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.25□□□□□ -2.45
UBE3DQ7Z6J8 MIR6779-201ENST00000617283 64 ntBASIC-0.25□□□□□ -2.45
UBE3DQ7Z6J8 SNORA27.2-201ENST00000363365 126 ntBASIC-0.26□□□□□ -2.45
UBE3DQ7Z6J8 RNU6-838P-201ENST00000363399 108 ntBASIC-0.26□□□□□ -2.45
UBE3DQ7Z6J8 RNU6-35P-201ENST00000384530 107 ntBASIC-0.26□□□□□ -2.45
UBE3DQ7Z6J8 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.27□□□□□ -2.45
UBE3DQ7Z6J8 RNU6-930P-201ENST00000390938 100 ntBASIC-0.28□□□□□ -2.45
UBE3DQ7Z6J8 SNORD114-17-201ENST00000364699 75 ntBASIC-0.29□□□□□ -2.46
UBE3DQ7Z6J8 MIR520D-201ENST00000385002 87 ntBASIC-0.29□□□□□ -2.46
UBE3DQ7Z6J8 SNORD14C-201ENST00000365382 88 ntBASIC-0.3□□□□□ -2.46
UBE3DQ7Z6J8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.3□□□□□ -2.46
UBE3DQ7Z6J8 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.31□□□□□ -2.46
UBE3DQ7Z6J8 RNU6-721P-201ENST00000410155 105 ntBASIC-0.32□□□□□ -2.46
UBE3DQ7Z6J8 SNORD114-14-201ENST00000362723 75 ntBASIC-0.33□□□□□ -2.46
UBE3DQ7Z6J8 RNA5SP457-201ENST00000363657 124 ntBASIC-0.33□□□□□ -2.46
UBE3DQ7Z6J8 RNU6-974P-201ENST00000384099 108 ntBASIC-0.33□□□□□ -2.46
UBE3DQ7Z6J8 AP002795.1-201ENST00000534879 84 ntBASIC-0.33□□□□□ -2.46
UBE3DQ7Z6J8 MIR548F3-201ENST00000408509 87 ntBASIC-0.35□□□□□ -2.47
UBE3DQ7Z6J8 MIR548AL-201ENST00000578416 97 ntBASIC-0.35□□□□□ -2.47
UBE3DQ7Z6J8 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.36□□□□□ -2.47
UBE3DQ7Z6J8 MIR214-201ENST00000385214 110 ntBASIC-0.36□□□□□ -2.47
UBE3DQ7Z6J8 RNU6-258P-201ENST00000390884 101 ntBASIC-0.36□□□□□ -2.47
UBE3DQ7Z6J8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.37□□□□□ -2.47
UBE3DQ7Z6J8 MIR29B1-201ENST00000385015 81 ntBASIC-0.37□□□□□ -2.47
UBE3DQ7Z6J8 MIR23C-201ENST00000579846 100 ntBASIC-0.37□□□□□ -2.47
UBE3DQ7Z6J8 RNU6-608P-201ENST00000383927 104 ntBASIC-0.38□□□□□ -2.47
UBE3DQ7Z6J8 SNORD126-201ENST00000459475 77 ntBASIC-0.38□□□□□ -2.47
UBE3DQ7Z6J8 RNU6-530P-201ENST00000391180 107 ntBASIC-0.4□□□□□ -2.47
UBE3DQ7Z6J8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
UBE3DQ7Z6J8 IGLVI-20-201ENST00000519296 130 ntBASIC-0.41□□□□□ -2.48
UBE3DQ7Z6J8 MIR8064-201ENST00000612863 90 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms