Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 MIR548M-201ENST00000408260 86 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 MIR1285-2-201ENST00000408311 88 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 RNU4-88P-201ENST00000411220 86 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.53□□□□□ -2.65
RAB40BQ12829 RNU6-497P-201ENST00000365316 104 ntBASIC-1.54□□□□□ -2.66
RAB40BQ12829 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.54□□□□□ -2.66
RAB40BQ12829 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.54□□□□□ -2.66
RAB40BQ12829 AC005520.4-201ENST00000604337 90 ntBASIC-1.54□□□□□ -2.66
RAB40BQ12829 AC013734.1-201ENST00000619329 111 ntBASIC-1.54□□□□□ -2.66
RAB40BQ12829 MIR198-201ENST00000637333 62 ntBASIC-1.54□□□□□ -2.66
RAB40BQ12829 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.55□□□□□ -2.66
RAB40BQ12829 MIR630-201ENST00000384957 97 ntBASIC-1.55□□□□□ -2.66
RAB40BQ12829 MT-TR-201ENST00000387439 65 ntBASIC-1.55□□□□□ -2.66
RAB40BQ12829 RNU6-313P-201ENST00000516317 112 ntBASIC-1.55□□□□□ -2.66
RAB40BQ12829 RNU6-980P-201ENST00000516925 103 ntBASIC-1.55□□□□□ -2.66
RAB40BQ12829 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.55□□□□□ -2.66
RAB40BQ12829 SNORD45.1-201ENST00000363181 77 ntBASIC-1.56□□□□□ -2.66
RAB40BQ12829 RNA5SP215-201ENST00000363440 122 ntBASIC-1.56□□□□□ -2.66
RAB40BQ12829 SNORA8.1-201ENST00000384250 140 ntBASIC-1.56□□□□□ -2.66
RAB40BQ12829 SNORA41B-201ENST00000384785 128 ntBASIC-1.56□□□□□ -2.66
RAB40BQ12829 SNORA40.13-201ENST00000516379 120 ntBASIC-1.56□□□□□ -2.66
RAB40BQ12829 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.56□□□□□ -2.66
RAB40BQ12829 MALAT1.1-201ENST00000618249 95 ntBASIC-1.56□□□□□ -2.66
RAB40BQ12829 SNORD1B-201ENST00000363091 84 ntBASIC-1.57□□□□□ -2.66
RAB40BQ12829 SNORA27.2-201ENST00000363365 126 ntBASIC-1.57□□□□□ -2.66
RAB40BQ12829 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.57□□□□□ -2.66
RAB40BQ12829 MIR548W-201ENST00000581970 74 ntBASIC-1.57□□□□□ -2.66
RAB40BQ12829 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.58□□□□□ -2.66
RAB40BQ12829 RNU6-686P-201ENST00000364839 107 ntBASIC-1.58□□□□□ -2.66
RAB40BQ12829 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.58□□□□□ -2.66
RAB40BQ12829 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
RAB40BQ12829 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.59□□□□□ -2.66
RAB40BQ12829 MIR125B1-201ENST00000385236 88 ntBASIC-1.59□□□□□ -2.66
RAB40BQ12829 MIR601-201ENST00000385256 79 ntBASIC-1.59□□□□□ -2.66
RAB40BQ12829 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.59□□□□□ -2.66
RAB40BQ12829 RNU6-402P-201ENST00000410678 103 ntBASIC-1.59□□□□□ -2.66
RAB40BQ12829 AP001318.4-201ENST00000616637 121 ntBASIC-1.59□□□□□ -2.66
RAB40BQ12829 MIR7978-201ENST00000636158 59 ntBASIC-1.59□□□□□ -2.66
RAB40BQ12829 RNU6-247P-201ENST00000362636 107 ntBASIC-1.6□□□□□ -2.67
RAB40BQ12829 RNA5SP405-201ENST00000363059 114 ntBASIC-1.6□□□□□ -2.67
RAB40BQ12829 RNU6-219P-201ENST00000364728 107 ntBASIC-1.6□□□□□ -2.67
RAB40BQ12829 SNORD115-31-201ENST00000365318 82 ntBASIC-1.6□□□□□ -2.67
RAB40BQ12829 RNU6-669P-201ENST00000365575 107 ntBASIC-1.6□□□□□ -2.67
RAB40BQ12829 RNU7-151P-201ENST00000516930 53 ntBASIC-1.6□□□□□ -2.67
RAB40BQ12829 MIR4441-201ENST00000582623 100 ntBASIC-1.6□□□□□ -2.67
RAB40BQ12829 MIR1468-201ENST00000410600 86 ntBASIC-1.61□□□□□ -2.67
RAB40BQ12829 snoU13.10-201ENST00000459301 103 ntBASIC-1.61□□□□□ -2.67
RAB40BQ12829 MIR548BB-201ENST00000626714 66 ntBASIC-1.61□□□□□ -2.67
RAB40BQ12829 SNORD113.1-201ENST00000363280 73 ntBASIC-1.62□□□□□ -2.67
RAB40BQ12829 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.62□□□□□ -2.67
RAB40BQ12829 MTND4LP1-201ENST00000446263 157 ntBASIC-1.62□□□□□ -2.67
RAB40BQ12829 RNU6-523P-201ENST00000516304 54 ntBASIC-1.62□□□□□ -2.67
RAB40BQ12829 RNU6-267P-201ENST00000516714 103 ntBASIC-1.62□□□□□ -2.67
RAB40BQ12829 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.63□□□□□ -2.67
RAB40BQ12829 RNY4P18-201ENST00000391107 89 ntBASIC-1.63□□□□□ -2.67
RAB40BQ12829 RNY3P8-201ENST00000411366 126 ntBASIC-1.63□□□□□ -2.67
RAB40BQ12829 SNORD63.2-201ENST00000516303 64 ntBASIC-1.63□□□□□ -2.67
RAB40BQ12829 MIR4748-201ENST00000578076 82 ntBASIC-1.63□□□□□ -2.67
RAB40BQ12829 RNU6-668P-201ENST00000364180 107 ntBASIC-1.64□□□□□ -2.67
RAB40BQ12829 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.64□□□□□ -2.67
RAB40BQ12829 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.64□□□□□ -2.67
RAB40BQ12829 RNU6-974P-201ENST00000384099 108 ntBASIC-1.64□□□□□ -2.67
RAB40BQ12829 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.64□□□□□ -2.67
RAB40BQ12829 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.64□□□□□ -2.67
RAB40BQ12829 U6.97-201ENST00000636904 101 ntBASIC-1.64□□□□□ -2.67
RAB40BQ12829 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.65□□□□□ -2.67
RAB40BQ12829 MIR581-201ENST00000384895 96 ntBASIC-1.65□□□□□ -2.67
RAB40BQ12829 RNU6-995P-201ENST00000391244 107 ntBASIC-1.65□□□□□ -2.67
RAB40BQ12829 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.65□□□□□ -2.67
RAB40BQ12829 MIR1297-201ENST00000637311 77 ntBASIC-1.65□□□□□ -2.67
RAB40BQ12829 MIR365A-201ENST00000362260 87 ntBASIC-1.66□□□□□ -2.68
RAB40BQ12829 SNORD18C-201ENST00000362704 69 ntBASIC-1.66□□□□□ -2.68
RAB40BQ12829 RNA5SP173-201ENST00000364857 136 ntBASIC-1.66□□□□□ -2.68
RAB40BQ12829 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.66□□□□□ -2.68
RAB40BQ12829 MIR579-201ENST00000385221 98 ntBASIC-1.66□□□□□ -2.68
RAB40BQ12829 RNU6-129P-201ENST00000391022 107 ntBASIC-1.66□□□□□ -2.68
RAB40BQ12829 MIR8053-201ENST00000613344 75 ntBASIC-1.66□□□□□ -2.68
RAB40BQ12829 RNU6-194P-201ENST00000363862 105 ntBASIC-1.67□□□□□ -2.68
RAB40BQ12829 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.67□□□□□ -2.68
RAB40BQ12829 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
RAB40BQ12829 RNU6-172P-201ENST00000411000 93 ntBASIC-1.67□□□□□ -2.68
RAB40BQ12829 RNU6-118P-201ENST00000516552 102 ntBASIC-1.67□□□□□ -2.68
RAB40BQ12829 SNORD45A-201ENST00000384512 84 ntBASIC-1.68□□□□□ -2.68
RAB40BQ12829 MIR4484-201ENST00000582855 83 ntBASIC-1.68□□□□□ -2.68
RAB40BQ12829 MIR466-201ENST00000580653 84 ntBASIC-1.69□□□□□ -2.68
RAB40BQ12829 MIR3910-1-201ENST00000580936 111 ntBASIC-1.69□□□□□ -2.68
RAB40BQ12829 RNU6-755P-201ENST00000364400 103 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 RNU6-32P-201ENST00000383948 107 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 RNU6-13P-201ENST00000384248 107 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 RNU6-12P-201ENST00000384604 107 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 RNU6-41P-201ENST00000384741 107 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 MIR548N-201ENST00000408742 75 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 AC097484.2-201ENST00000509147 251 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 MIR3139-201ENST00000579145 76 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 FTX_4.1-201ENST00000616291 147 ntBASIC-1.7□□□□□ -2.68
RAB40BQ12829 SNORA63.4-201ENST00000362763 126 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms