Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 MIR3128-201ENST00000581957 66 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-822P-201ENST00000362707 106 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-623P-201ENST00000363143 105 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 SNORD115-31-201ENST00000365318 82 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-876P-201ENST00000391295 104 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.59□□□□□ -2.5
COL7A1Q02388 RNU6-330P-201ENST00000363015 107 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
COL7A1Q02388 RNU2-16P-201ENST00000410712 136 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 RNU6-557P-201ENST00000516842 110 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 AC103810.7-201ENST00000607821 91 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 MTND4P29-201ENST00000503122 1372 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 SNORD116-18-201ENST00000383961 92 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 SNORA40.13-201ENST00000516379 120 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 AC022559.1-201ENST00000520905 205 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 MIR4282-201ENST00000583613 67 ntBASIC-0.6□□□□□ -2.51
COL7A1Q02388 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-742P-201ENST00000365289 107 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 SNORD60-201ENST00000383903 83 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-520P-201ENST00000384717 104 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU7-197P-201ENST00000458836 62 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 AC093729.1-201ENST00000513074 128 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 MIR3144-201ENST00000579460 79 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 MIR7110-201ENST00000612638 86 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 MIR1297-201ENST00000637311 77 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-797P-201ENST00000363101 109 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 SNORD113.1-201ENST00000363280 73 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-590P-201ENST00000365039 107 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 SNORA33.2-201ENST00000365413 134 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 SNORA8.1-201ENST00000384250 140 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-196P-201ENST00000384315 107 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-971P-201ENST00000516920 106 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-834P-201ENST00000362367 110 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU6-686P-201ENST00000364839 107 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 SNORA40B-201ENST00000385573 128 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 MIR548F1-201ENST00000408667 84 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 MTATP8P2-201ENST00000435212 202 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 RNU7-160P-201ENST00000516660 62 ntBASIC-0.61□□□□□ -2.51
COL7A1Q02388 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNU6-574P-201ENST00000384265 107 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 MIR363-201ENST00000384840 75 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNU6-663P-201ENST00000391105 106 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 SNORD116.2-201ENST00000391251 93 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNU6-172P-201ENST00000411000 93 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 AC074348.1-201ENST00000426503 132 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 AL158147.1-201ENST00000443970 75 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNU6-111P-201ENST00000517179 105 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 MIR4796-201ENST00000580742 81 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 AL731768.1-201ENST00000603124 139 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNA5SP215-201ENST00000363440 122 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNA5SP224-201ENST00000365069 126 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNU6-497P-201ENST00000365316 104 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNU6-530P-201ENST00000391180 107 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 RNY3P8-201ENST00000411366 126 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 MIR23C-201ENST00000579846 100 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 AP001318.4-201ENST00000616637 121 ntBASIC-0.62□□□□□ -2.51
COL7A1Q02388 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-979P-201ENST00000383896 107 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-665P-201ENST00000384639 107 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-907P-201ENST00000390924 102 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 MTND4LP9-201ENST00000427694 174 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-633P-201ENST00000362612 103 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-394P-201ENST00000410735 107 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 AL031737.1-201ENST00000450125 223 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU7-119P-201ENST00000459279 63 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-162P-201ENST00000516228 103 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-267P-201ENST00000516714 103 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 MTND5P41-201ENST00000517498 206 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 AC141273.2-201ENST00000618989 130 ntBASIC-0.63□□□□□ -2.51
COL7A1Q02388 RNU6-668P-201ENST00000364180 107 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 RNU6-275P-201ENST00000364910 107 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 RNU6-887P-201ENST00000410660 100 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 SNORA40-201ENST00000388090 126 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 MTND5P20-201ENST00000448677 143 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms