Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-267P-201ENST00000516714 103 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 U7.2-201ENST00000607576 63 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU6-918P-201ENST00000391219 106 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU6-419P-201ENST00000517030 63 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 SNORA63.4-201ENST00000362763 126 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 SNORD58C-201ENST00000365223 64 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU6-887P-201ENST00000410660 100 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU7-119P-201ENST00000459279 63 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU6-795P-201ENST00000516323 103 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU4-71P-201ENST00000516258 113 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 RNU6-542P-201ENST00000516405 103 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 AC020661.2-201ENST00000560114 134 ntBASIC-1.36□□□□□ -2.63
HSPG2P98160 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.37□□□□□ -2.63
HSPG2P98160 RNU6-867P-201ENST00000364956 107 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 AL157777.2-201ENST00000258070 137 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 SNORA63-201ENST00000363450 132 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 RNU6-402P-201ENST00000410678 103 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 MIR2052-201ENST00000636055 55 ntBASIC-1.37□□□□□ -2.63
HSPG2P98160 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 AL158147.1-201ENST00000443970 75 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 AC062037.1-201ENST00000605302 128 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 MIR4668-201ENST00000582284 70 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 SNORD45A-201ENST00000384512 84 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 AC113195.1-201ENST00000579952 141 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.38□□□□□ -2.63
HSPG2P98160 RNU4-40P-201ENST00000364351 143 ntBASIC-1.39□□□□□ -2.63
HSPG2P98160 RNU6-742P-201ENST00000365289 107 ntBASIC-1.39□□□□□ -2.63
HSPG2P98160 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.39□□□□□ -2.63
HSPG2P98160 SNORA81.3-201ENST00000517283 198 ntBASIC-1.39□□□□□ -2.63
HSPG2P98160 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.39□□□□□ -2.63
HSPG2P98160 SNORD116.2-201ENST00000391251 93 ntBASIC-1.39□□□□□ -2.63
HSPG2P98160 MIR8062-201ENST00000621515 85 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 RNU6-231P-201ENST00000517122 103 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 AP001318.4-201ENST00000616637 121 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 SNORD116-4-201ENST00000384733 96 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.4□□□□□ -2.63
HSPG2P98160 MIR548AI-201ENST00000579940 88 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.4□□□□□ -2.63
HSPG2P98160 RNU6-854P-201ENST00000364036 107 ntBASIC-1.41□□□□□ -2.63
HSPG2P98160 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.41□□□□□ -2.63
HSPG2P98160 RNU6-665P-201ENST00000384639 107 ntBASIC-1.41□□□□□ -2.64
HSPG2P98160 RNU6-985P-201ENST00000410182 104 ntBASIC-1.41□□□□□ -2.64
HSPG2P98160 RNU6-196P-201ENST00000384315 107 ntBASIC-1.41□□□□□ -2.64
HSPG2P98160 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.41□□□□□ -2.64
HSPG2P98160 SNORD19B-201ENST00000459623 84 ntBASIC-1.41□□□□□ -2.64
HSPG2P98160 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.42□□□□□ -2.64
HSPG2P98160 RNA5SP224-201ENST00000365069 126 ntBASIC-1.42□□□□□ -2.64
HSPG2P98160 RNU6-659P-201ENST00000516454 104 ntBASIC-1.42□□□□□ -2.64
HSPG2P98160 U7.3-201ENST00000616123 62 ntBASIC-1.42□□□□□ -2.64
HSPG2P98160 AC139453.2-201ENST00000487255 133 ntBASIC-1.42□□□□□ -2.64
HSPG2P98160 RNU6-633P-201ENST00000362612 103 ntBASIC-1.42□□□□□ -2.64
HSPG2P98160 RNU6-940P-201ENST00000363433 104 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 RNU6-772P-201ENST00000516042 105 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 SNORA40B-201ENST00000385573 128 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 MT-TL1-201ENST00000386347 75 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 RNU6-574P-201ENST00000384265 107 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 SNORA40.16-201ENST00000517238 121 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 RNU6-380P-201ENST00000410207 107 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 RNU6-70P-201ENST00000516438 60 ntBASIC-1.43□□□□□ -2.64
HSPG2P98160 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 RNU6-713P-201ENST00000384761 107 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 RNU2-16P-201ENST00000410712 136 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 SNORD115-45-201ENST00000391078 81 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 MIR3974-201ENST00000637126 96 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 RNU6-776P-201ENST00000364403 104 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 AC069439.1-201ENST00000494739 167 ntBASIC-1.44□□□□□ -2.64
HSPG2P98160 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 RNY3P1-201ENST00000365085 102 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 RNU6-718P-201ENST00000516166 105 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 MIR363-201ENST00000384840 75 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 SNORA33.2-201ENST00000365413 134 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 SNORD116-24-201ENST00000384549 92 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 U6.95-201ENST00000636931 70 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 SNORD42.2-201ENST00000365570 69 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 RNU7-197P-201ENST00000458836 62 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 AC139792.2-201ENST00000624218 587 ntBASIC-1.45□□□□□ -2.64
HSPG2P98160 SNORD116-22-201ENST00000384430 92 ntBASIC-1.46□□□□□ -2.64
HSPG2P98160 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.46□□□□□ -2.64
HSPG2P98160 MIR154-201ENST00000385243 84 ntBASIC-1.47□□□□□ -2.64
HSPG2P98160 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
HSPG2P98160 RNU6-876P-201ENST00000391295 104 ntBASIC-1.47□□□□□ -2.64
HSPG2P98160 RNU6-422P-201ENST00000384632 107 ntBASIC-1.47□□□□□ -2.64
HSPG2P98160 MIR656-201ENST00000385224 78 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms