Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL031737.1-201ENST00000450125 223 ntBASIC-2.36□□□□□ -2.79
SSR1P43307 RNU6-557P-201ENST00000516842 110 ntBASIC-2.36□□□□□ -2.79
SSR1P43307 RNU6-563P-201ENST00000364872 108 ntBASIC-2.37□□□□□ -2.79
SSR1P43307 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.38□□□□□ -2.79
SSR1P43307 RNU6-698P-201ENST00000363523 107 ntBASIC-2.38□□□□□ -2.79
SSR1P43307 RNU6-34P-201ENST00000364874 107 ntBASIC-2.38□□□□□ -2.79
SSR1P43307 RNU6-497P-201ENST00000365316 104 ntBASIC-2.38□□□□□ -2.79
SSR1P43307 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.38□□□□□ -2.79
SSR1P43307 MIR2052-201ENST00000636055 55 ntBASIC-2.38□□□□□ -2.79
SSR1P43307 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.38□□□□□ -2.79
SSR1P43307 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.39□□□□□ -2.79
SSR1P43307 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.39□□□□□ -2.79
SSR1P43307 AP001318.4-201ENST00000616637 121 ntBASIC-2.39□□□□□ -2.79
SSR1P43307 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.39□□□□□ -2.79
SSR1P43307 snosnR66.1-201ENST00000391095 99 ntBASIC-2.4□□□□□ -2.79
SSR1P43307 MIR429-201ENST00000362106 83 ntBASIC-2.41□□□□□ -2.8
SSR1P43307 MIR664A-201ENST00000626086 82 ntBASIC-2.41□□□□□ -2.8
SSR1P43307 RNU6-129P-201ENST00000391022 107 ntBASIC-2.42□□□□□ -2.8
SSR1P43307 RNY4P27-201ENST00000363341 96 ntBASIC-2.43□□□□□ -2.8
SSR1P43307 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.43□□□□□ -2.8
SSR1P43307 MIR488-201ENST00000365739 83 ntBASIC-2.43□□□□□ -2.8
SSR1P43307 SNORD113-2-201ENST00000391082 72 ntBASIC-2.43□□□□□ -2.8
SSR1P43307 RNU6-980P-201ENST00000516925 103 ntBASIC-2.43□□□□□ -2.8
SSR1P43307 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.43□□□□□ -2.8
SSR1P43307 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.44□□□□□ -2.8
SSR1P43307 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.44□□□□□ -2.8
SSR1P43307 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.44□□□□□ -2.8
SSR1P43307 SNORA40.13-201ENST00000516379 120 ntBASIC-2.44□□□□□ -2.8
SSR1P43307 MIR3170-201ENST00000582699 77 ntBASIC-2.44□□□□□ -2.8
SSR1P43307 MIR4723-201ENST00000585070 81 ntBASIC-2.44□□□□□ -2.8
SSR1P43307 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.45□□□□□ -2.8
SSR1P43307 RNU6-81P-201ENST00000365608 104 ntBASIC-2.45□□□□□ -2.8
SSR1P43307 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.45□□□□□ -2.8
SSR1P43307 RNU6-258P-201ENST00000390884 101 ntBASIC-2.45□□□□□ -2.8
SSR1P43307 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.45□□□□□ -2.8
SSR1P43307 SNORD45A-201ENST00000384512 84 ntBASIC-2.46□□□□□ -2.8
SSR1P43307 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.46□□□□□ -2.8
SSR1P43307 RNU4-88P-201ENST00000411220 86 ntBASIC-2.46□□□□□ -2.8
SSR1P43307 RNU6-668P-201ENST00000364180 107 ntBASIC-2.47□□□□□ -2.8
SSR1P43307 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.47□□□□□ -2.8
SSR1P43307 MTND4LP1-201ENST00000446263 157 ntBASIC-2.47□□□□□ -2.8
SSR1P43307 SNORD113.1-201ENST00000363280 73 ntBASIC-2.48□□□□□ -2.81
SSR1P43307 RNU6-22P-201ENST00000384355 107 ntBASIC-2.48□□□□□ -2.81
SSR1P43307 MIR1207-201ENST00000408249 87 ntBASIC-2.48□□□□□ -2.81
SSR1P43307 SNORA41B-201ENST00000384785 128 ntBASIC-2.49□□□□□ -2.81
SSR1P43307 RNY4P18-201ENST00000391107 89 ntBASIC-2.5□□□□□ -2.81
SSR1P43307 RNU6-834P-201ENST00000362367 110 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 RNA5SP405-201ENST00000363059 114 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 MIR548AA1-201ENST00000384971 97 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 AC006160.2-201ENST00000637708 154 ntBASIC-2.52□□□□□ -2.81
SSR1P43307 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.53□□□□□ -2.81
SSR1P43307 SNORD1B-201ENST00000363091 84 ntBASIC-2.54□□□□□ -2.82
SSR1P43307 SNORD116-16-201ENST00000384533 92 ntBASIC-2.54□□□□□ -2.82
SSR1P43307 AC013734.1-201ENST00000619329 111 ntBASIC-2.54□□□□□ -2.82
SSR1P43307 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.55□□□□□ -2.82
SSR1P43307 RNU6-640P-201ENST00000363693 105 ntBASIC-2.55□□□□□ -2.82
SSR1P43307 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.55□□□□□ -2.82
SSR1P43307 RNU6-247P-201ENST00000362636 107 ntBASIC-2.56□□□□□ -2.82
SSR1P43307 RNA5SP215-201ENST00000363440 122 ntBASIC-2.56□□□□□ -2.82
SSR1P43307 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.56□□□□□ -2.82
SSR1P43307 MIR1297-201ENST00000637311 77 ntBASIC-2.56□□□□□ -2.82
SSR1P43307 RNU6-675P-201ENST00000384236 104 ntBASIC-2.57□□□□□ -2.82
SSR1P43307 MIR579-201ENST00000385221 98 ntBASIC-2.57□□□□□ -2.82
SSR1P43307 MT-TR-201ENST00000387439 65 ntBASIC-2.57□□□□□ -2.82
SSR1P43307 RNU6-844P-201ENST00000517175 102 ntBASIC-2.57□□□□□ -2.82
SSR1P43307 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.57□□□□□ -2.82
SSR1P43307 AC005520.4-201ENST00000604337 90 ntBASIC-2.57□□□□□ -2.82
SSR1P43307 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.57□□□□□ -2.82
SSR1P43307 RNU6-194P-201ENST00000363862 105 ntBASIC-2.58□□□□□ -2.82
SSR1P43307 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.58□□□□□ -2.82
SSR1P43307 MIR548W-201ENST00000581970 74 ntBASIC-2.58□□□□□ -2.82
SSR1P43307 MIR8053-201ENST00000613344 75 ntBASIC-2.58□□□□□ -2.82
SSR1P43307 SNORA63.4-201ENST00000362763 126 ntBASIC-2.59□□□□□ -2.82
SSR1P43307 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.59□□□□□ -2.82
SSR1P43307 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.59□□□□□ -2.82
SSR1P43307 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.6□□□□□ -2.83
SSR1P43307 SNORA27.2-201ENST00000363365 126 ntBASIC-2.6□□□□□ -2.83
SSR1P43307 SNORD115-31-201ENST00000365318 82 ntBASIC-2.6□□□□□ -2.83
SSR1P43307 RNU6-313P-201ENST00000516317 112 ntBASIC-2.6□□□□□ -2.83
SSR1P43307 snoU13.10-201ENST00000459301 103 ntBASIC-2.61□□□□□ -2.83
SSR1P43307 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.61□□□□□ -2.83
SSR1P43307 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.63□□□□□ -2.83
SSR1P43307 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.63□□□□□ -2.83
SSR1P43307 RNU6-118P-201ENST00000516552 102 ntBASIC-2.63□□□□□ -2.83
SSR1P43307 RNU7-151P-201ENST00000516930 53 ntBASIC-2.63□□□□□ -2.83
SSR1P43307 RNU6-380P-201ENST00000410207 107 ntBASIC-2.64□□□□□ -2.83
SSR1P43307 MIR4748-201ENST00000578076 82 ntBASIC-2.64□□□□□ -2.83
SSR1P43307 MIR466-201ENST00000580653 84 ntBASIC-2.64□□□□□ -2.83
SSR1P43307 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.64□□□□□ -2.83
SSR1P43307 U6.97-201ENST00000636904 101 ntBASIC-2.65□□□□□ -2.83
SSR1P43307 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.66□□□□□ -2.84
SSR1P43307 MIR3139-201ENST00000579145 76 ntBASIC-2.66□□□□□ -2.84
SSR1P43307 MIR3668-201ENST00000582138 75 ntBASIC-2.66□□□□□ -2.84
SSR1P43307 RNU6-119P-201ENST00000364882 107 ntBASIC-2.67□□□□□ -2.84
SSR1P43307 RNU6-669P-201ENST00000365575 107 ntBASIC-2.67□□□□□ -2.84
SSR1P43307 RNU6-32P-201ENST00000383948 107 ntBASIC-2.67□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms