Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.89□□□□□ -2.87
RPA3P35244 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.9□□□□□ -2.87
RPA3P35244 RNU6-668P-201ENST00000364180 107 ntBASIC-2.91□□□□□ -2.88
RPA3P35244 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.91□□□□□ -2.88
RPA3P35244 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.91□□□□□ -2.88
RPA3P35244 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.91□□□□□ -2.88
RPA3P35244 RNU6-980P-201ENST00000516925 103 ntBASIC-2.91□□□□□ -2.88
RPA3P35244 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.92□□□□□ -2.88
RPA3P35244 SNORD1B-201ENST00000363091 84 ntBASIC-2.92□□□□□ -2.88
RPA3P35244 RNU6-119P-201ENST00000364882 107 ntBASIC-2.92□□□□□ -2.88
RPA3P35244 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.92□□□□□ -2.88
RPA3P35244 MIR4484-201ENST00000582855 83 ntBASIC-2.92□□□□□ -2.88
RPA3P35244 RNU6-766P-201ENST00000362478 107 ntBASIC-2.93□□□□□ -2.88
RPA3P35244 RNA5SP405-201ENST00000363059 114 ntBASIC-2.93□□□□□ -2.88
RPA3P35244 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.93□□□□□ -2.88
RPA3P35244 SNORA41B-201ENST00000384785 128 ntBASIC-2.93□□□□□ -2.88
RPA3P35244 SNORD116-22-201ENST00000384430 92 ntBASIC-2.94□□□□□ -2.88
RPA3P35244 RNU6-995P-201ENST00000391244 107 ntBASIC-2.94□□□□□ -2.88
RPA3P35244 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.94□□□□□ -2.88
RPA3P35244 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.95□□□□□ -2.88
RPA3P35244 MIR548BB-201ENST00000626714 66 ntBASIC-2.95□□□□□ -2.88
RPA3P35244 RNU6-219P-201ENST00000364728 107 ntBASIC-2.96□□□□□ -2.88
RPA3P35244 RNA5SP173-201ENST00000364857 136 ntBASIC-2.96□□□□□ -2.88
RPA3P35244 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.96□□□□□ -2.88
RPA3P35244 RNU6-267P-201ENST00000516714 103 ntBASIC-2.96□□□□□ -2.88
RPA3P35244 MIR2052-201ENST00000636055 55 ntBASIC-2.96□□□□□ -2.88
RPA3P35244 SNORD113.1-201ENST00000363280 73 ntBASIC-2.97□□□□□ -2.88
RPA3P35244 RNU6-129P-201ENST00000391022 107 ntBASIC-2.97□□□□□ -2.88
RPA3P35244 RNY4P18-201ENST00000391107 89 ntBASIC-2.97□□□□□ -2.88
RPA3P35244 RNU6-402P-201ENST00000410678 103 ntBASIC-2.97□□□□□ -2.88
RPA3P35244 RNU7-151P-201ENST00000516930 53 ntBASIC-2.97□□□□□ -2.88
RPA3P35244 MIR3139-201ENST00000579145 76 ntBASIC-2.97□□□□□ -2.88
RPA3P35244 AC013734.1-201ENST00000619329 111 ntBASIC-2.97□□□□□ -2.88
RPA3P35244 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.97□□□□□ -2.88
RPA3P35244 RNU6-497P-201ENST00000365316 104 ntBASIC-2.98□□□□□ -2.89
RPA3P35244 SNORD63.2-201ENST00000516303 64 ntBASIC-2.98□□□□□ -2.89
RPA3P35244 MIR8053-201ENST00000613344 75 ntBASIC-2.98□□□□□ -2.89
RPA3P35244 SNORA27.2-201ENST00000363365 126 ntBASIC-2.99□□□□□ -2.89
RPA3P35244 RNU6-194P-201ENST00000363862 105 ntBASIC-2.99□□□□□ -2.89
RPA3P35244 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.99□□□□□ -2.89
RPA3P35244 MIR1297-201ENST00000637311 77 ntBASIC-2.99□□□□□ -2.89
RPA3P35244 Y_RNA.211-201ENST00000364164 101 ntBASIC-3□□□□□ -2.89
RPA3P35244 Y_RNA.261-201ENST00000364631 102 ntBASIC-3□□□□□ -2.89
RPA3P35244 Y_RNA.564-201ENST00000384708 106 ntBASIC-3□□□□□ -2.89
RPA3P35244 MIR579-201ENST00000385221 98 ntBASIC-3□□□□□ -2.89
RPA3P35244 RNU4-88P-201ENST00000411220 86 ntBASIC-3□□□□□ -2.89
RPA3P35244 AC005520.4-201ENST00000604337 90 ntBASIC-3□□□□□ -2.89
RPA3P35244 U6.97-201ENST00000636904 101 ntBASIC-3□□□□□ -2.89
RPA3P35244 RNU6-669P-201ENST00000365575 107 ntBASIC-3.01□□□□□ -2.89
RPA3P35244 MIR496-201ENST00000385226 102 ntBASIC-3.01□□□□□ -2.89
RPA3P35244 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.02□□□□□ -2.89
RPA3P35244 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.02□□□□□ -2.89
RPA3P35244 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.03□□□□□ -2.89
RPA3P35244 SNORD45A-201ENST00000384512 84 ntBASIC-3.03□□□□□ -2.89
RPA3P35244 RNU6-172P-201ENST00000411000 93 ntBASIC-3.05□□□□□ -2.9
RPA3P35244 MIR7978-201ENST00000636158 59 ntBASIC-3.06□□□□□ -2.9
RPA3P35244 MT-TM-201ENST00000387377 68 ntBASIC-3.07□□□□□ -2.9
RPA3P35244 RNU6-380P-201ENST00000410207 107 ntBASIC-3.07□□□□□ -2.9
RPA3P35244 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.07□□□□□ -2.9
RPA3P35244 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.07□□□□□ -2.9
RPA3P35244 SNORA63.4-201ENST00000362763 126 ntBASIC-3.08□□□□□ -2.9
RPA3P35244 RNY3P8-201ENST00000411366 126 ntBASIC-3.08□□□□□ -2.9
RPA3P35244 RNU6-589P-201ENST00000516485 107 ntBASIC-3.08□□□□□ -2.9
RPA3P35244 MALAT1.1-201ENST00000618249 95 ntBASIC-3.08□□□□□ -2.9
RPA3P35244 MIR664A-201ENST00000626086 82 ntBASIC-3.08□□□□□ -2.9
RPA3P35244 RNU6-755P-201ENST00000364400 103 ntBASIC-3.09□□□□□ -2.9
RPA3P35244 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.09□□□□□ -2.9
RPA3P35244 RNU6-523P-201ENST00000516304 54 ntBASIC-3.1□□□□□ -2.91
RPA3P35244 AP001318.4-201ENST00000616637 121 ntBASIC-3.11□□□□□ -2.91
RPA3P35244 MIR450A1-201ENST00000362262 91 ntBASIC-3.12□□□□□ -2.91
RPA3P35244 SNORD115-31-201ENST00000365318 82 ntBASIC-3.12□□□□□ -2.91
RPA3P35244 MIR125B1-201ENST00000385236 88 ntBASIC-3.12□□□□□ -2.91
RPA3P35244 AC008267.6-201ENST00000441664 139 ntBASIC-3.12□□□□□ -2.91
RPA3P35244 AC006160.2-201ENST00000637708 154 ntBASIC-3.12□□□□□ -2.91
RPA3P35244 AL031737.1-201ENST00000450125 223 ntBASIC-3.13□□□□□ -2.91
RPA3P35244 snoU13.10-201ENST00000459301 103 ntBASIC-3.13□□□□□ -2.91
RPA3P35244 RNU6-974P-201ENST00000384099 108 ntBASIC-3.14□□□□□ -2.91
RPA3P35244 SNORD54-201ENST00000459159 67 ntBASIC-3.14□□□□□ -2.91
RPA3P35244 MIR548W-201ENST00000581970 74 ntBASIC-3.14□□□□□ -2.91
RPA3P35244 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.15□□□□□ -2.91
RPA3P35244 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.15□□□□□ -2.91
RPA3P35244 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.15□□□□□ -2.91
RPA3P35244 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.15□□□□□ -2.91
RPA3P35244 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.16□□□□□ -2.92
RPA3P35244 RNU6-959P-201ENST00000384671 107 ntBASIC-3.16□□□□□ -2.92
RPA3P35244 SNORA40.13-201ENST00000516379 120 ntBASIC-3.16□□□□□ -2.92
RPA3P35244 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.17□□□□□ -2.92
RPA3P35244 MIR466-201ENST00000580653 84 ntBASIC-3.18□□□□□ -2.92
RPA3P35244 AL365222.1-201ENST00000614661 98 ntBASIC-3.18□□□□□ -2.92
RPA3P35244 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.19□□□□□ -2.92
RPA3P35244 SNORD18C-201ENST00000362704 69 ntBASIC-3.2□□□□□ -2.92
RPA3P35244 MIR3133-201ENST00000583157 78 ntBASIC-3.2□□□□□ -2.92
RPA3P35244 RNU6-675P-201ENST00000384236 104 ntBASIC-3.21□□□□□ -2.92
RPA3P35244 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.22□□□□□ -2.92
RPA3P35244 Y_RNA.709-201ENST00000516952 92 ntBASIC-3.22□□□□□ -2.92
RPA3P35244 RNU6-789P-201ENST00000517105 102 ntBASIC-3.22□□□□□ -2.92
RPA3P35244 RNU6-315P-201ENST00000362666 107 ntBASIC-3.23□□□□□ -2.93
RPA3P35244 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.23□□□□□ -2.93
RPA3P35244 SNORD116-24-201ENST00000384549 92 ntBASIC-3.24□□□□□ -2.93
RPA3P35244 RNU6-520P-201ENST00000384717 104 ntBASIC-3.24□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms