Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL731768.1-201ENST00000603124 139 ntBASIC-1.92□□□□□ -2.72
COL4A5P29400 SNORD115-37-201ENST00000363768 82 ntBASIC-1.93□□□□□ -2.72
COL4A5P29400 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.93□□□□□ -2.72
COL4A5P29400 RNU6-772P-201ENST00000516042 105 ntBASIC-1.93□□□□□ -2.72
COL4A5P29400 RNU6-698P-201ENST00000363523 107 ntBASIC-1.93□□□□□ -2.72
COL4A5P29400 RNU6-34P-201ENST00000364874 107 ntBASIC-1.93□□□□□ -2.72
COL4A5P29400 RNU7-153P-201ENST00000516455 62 ntBASIC-1.93□□□□□ -2.72
COL4A5P29400 RNU6-834P-201ENST00000362367 110 ntBASIC-1.94□□□□□ -2.72
COL4A5P29400 RNU6-797P-201ENST00000363101 109 ntBASIC-1.94□□□□□ -2.72
COL4A5P29400 MIR568-201ENST00000385036 95 ntBASIC-1.94□□□□□ -2.72
COL4A5P29400 MIR519C-201ENST00000385053 87 ntBASIC-1.94□□□□□ -2.72
COL4A5P29400 RNY4P18-201ENST00000391107 89 ntBASIC-1.94□□□□□ -2.72
COL4A5P29400 RNY4P10-201ENST00000365571 96 ntBASIC-1.95□□□□□ -2.72
COL4A5P29400 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.95□□□□□ -2.72
COL4A5P29400 MIR630-201ENST00000384957 97 ntBASIC-1.95□□□□□ -2.72
COL4A5P29400 SNORA40-201ENST00000388090 126 ntBASIC-1.95□□□□□ -2.72
COL4A5P29400 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 SNORD63.2-201ENST00000516303 64 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 RNU6-971P-201ENST00000516920 106 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 RNA5SP215-201ENST00000363440 122 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 MTND4LP9-201ENST00000427694 174 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 RNU6-523P-201ENST00000516304 54 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 MIR548V-201ENST00000584165 80 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 AC004792.1-201ENST00000614523 137 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 MIR7978-201ENST00000636158 59 ntBASIC-1.96□□□□□ -2.72
COL4A5P29400 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.97□□□□□ -2.73
COL4A5P29400 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.97□□□□□ -2.73
COL4A5P29400 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.97□□□□□ -2.73
COL4A5P29400 RNU6-649P-201ENST00000384463 107 ntBASIC-1.97□□□□□ -2.73
COL4A5P29400 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.97□□□□□ -2.73
COL4A5P29400 SNORA17.4-201ENST00000391287 132 ntBASIC-1.98□□□□□ -2.73
COL4A5P29400 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.98□□□□□ -2.73
COL4A5P29400 RNU7-61P-201ENST00000515897 61 ntBASIC-1.98□□□□□ -2.73
COL4A5P29400 RNU6-426P-201ENST00000516464 97 ntBASIC-1.98□□□□□ -2.73
COL4A5P29400 RNU6-361P-201ENST00000364454 107 ntBASIC-1.99□□□□□ -2.73
COL4A5P29400 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
COL4A5P29400 AL353621.2-201ENST00000605340 133 ntBASIC-1.99□□□□□ -2.73
COL4A5P29400 MIR202-201ENST00000362219 110 ntBASIC-1.99□□□□□ -2.73
COL4A5P29400 RNU6-624P-201ENST00000363411 107 ntBASIC-1.99□□□□□ -2.73
COL4A5P29400 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.99□□□□□ -2.73
COL4A5P29400 MIR569-201ENST00000385228 96 ntBASIC-1.99□□□□□ -2.73
COL4A5P29400 SNORD116-16-201ENST00000384533 92 ntBASIC-2□□□□□ -2.73
COL4A5P29400 MIR509-1-201ENST00000385265 94 ntBASIC-2□□□□□ -2.73
COL4A5P29400 MIR509-2-201ENST00000390724 91 ntBASIC-2□□□□□ -2.73
COL4A5P29400 RNU6-530P-201ENST00000391180 107 ntBASIC-2□□□□□ -2.73
COL4A5P29400 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2□□□□□ -2.73
COL4A5P29400 SNORD114-13-201ENST00000364377 74 ntBASIC-2.01□□□□□ -2.73
COL4A5P29400 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.01□□□□□ -2.73
COL4A5P29400 RNU6-520P-201ENST00000384717 104 ntBASIC-2.01□□□□□ -2.73
COL4A5P29400 MIR579-201ENST00000385221 98 ntBASIC-2.01□□□□□ -2.73
COL4A5P29400 RNU6-129P-201ENST00000391022 107 ntBASIC-2.01□□□□□ -2.73
COL4A5P29400 RNU6-200P-201ENST00000364743 107 ntBASIC-2.02□□□□□ -2.73
COL4A5P29400 RNU6-800P-201ENST00000384473 103 ntBASIC-2.02□□□□□ -2.73
COL4A5P29400 SNORA63-201ENST00000363450 132 ntBASIC-2.02□□□□□ -2.73
COL4A5P29400 SNORD45.1-201ENST00000363181 77 ntBASIC-2.03□□□□□ -2.73
COL4A5P29400 MTND4LP1-201ENST00000446263 157 ntBASIC-2.03□□□□□ -2.73
COL4A5P29400 RNU6-68P-201ENST00000516576 104 ntBASIC-2.03□□□□□ -2.73
COL4A5P29400 RNU6-345P-201ENST00000517001 107 ntBASIC-2.03□□□□□ -2.73
COL4A5P29400 SNORD1B-201ENST00000363091 84 ntBASIC-2.04□□□□□ -2.74
COL4A5P29400 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.04□□□□□ -2.74
COL4A5P29400 RNU6-196P-201ENST00000384315 107 ntBASIC-2.04□□□□□ -2.74
COL4A5P29400 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.04□□□□□ -2.74
COL4A5P29400 RNA5SP106-201ENST00000517274 100 ntBASIC-2.04□□□□□ -2.74
COL4A5P29400 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.05□□□□□ -2.74
COL4A5P29400 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.05□□□□□ -2.74
COL4A5P29400 RNU6-804P-201ENST00000384286 107 ntBASIC-2.05□□□□□ -2.74
COL4A5P29400 RNU6-904P-201ENST00000516206 101 ntBASIC-2.05□□□□□ -2.74
COL4A5P29400 RNU6-574P-201ENST00000384265 107 ntBASIC-2.06□□□□□ -2.74
COL4A5P29400 SNORA41B-201ENST00000384785 128 ntBASIC-2.06□□□□□ -2.74
COL4A5P29400 RNU6-668P-201ENST00000364180 107 ntBASIC-2.06□□□□□ -2.74
COL4A5P29400 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.06□□□□□ -2.74
COL4A5P29400 RNU6-182P-201ENST00000516970 105 ntBASIC-2.06□□□□□ -2.74
COL4A5P29400 U6.95-201ENST00000636931 70 ntBASIC-2.06□□□□□ -2.74
COL4A5P29400 MIR3914-2-201ENST00000637339 95 ntBASIC-2.06□□□□□ -2.74
COL4A5P29400 MIR1302-5-201ENST00000408164 150 ntBASIC-2.07□□□□□ -2.74
COL4A5P29400 MIR1254-1-201ENST00000408257 97 ntBASIC-2.07□□□□□ -2.74
COL4A5P29400 MIR1297-201ENST00000637311 77 ntBASIC-2.07□□□□□ -2.74
COL4A5P29400 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.08□□□□□ -2.74
COL4A5P29400 RNU7-107P-201ENST00000459121 61 ntBASIC-2.08□□□□□ -2.74
COL4A5P29400 RNU6-327P-201ENST00000516270 127 ntBASIC-2.08□□□□□ -2.74
COL4A5P29400 MIR4503-201ENST00000582187 83 ntBASIC-2.08□□□□□ -2.74
COL4A5P29400 RNU6-379P-201ENST00000363813 104 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 SNORA8.1-201ENST00000384250 140 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 RNU6-982P-201ENST00000516216 102 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 RNU6-303P-201ENST00000517091 106 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 MIR8053-201ENST00000613344 75 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 U7.3-201ENST00000616123 62 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.09□□□□□ -2.74
COL4A5P29400 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.1□□□□□ -2.75
COL4A5P29400 MIR125B1-201ENST00000385236 88 ntBASIC-2.1□□□□□ -2.75
COL4A5P29400 RNU6-257P-201ENST00000410238 98 ntBASIC-2.1□□□□□ -2.75
COL4A5P29400 AC093729.1-201ENST00000513074 128 ntBASIC-2.1□□□□□ -2.75
COL4A5P29400 RNU6-176P-201ENST00000517196 105 ntBASIC-2.1□□□□□ -2.75
COL4A5P29400 MIR2052-201ENST00000636055 55 ntBASIC-2.1□□□□□ -2.75
COL4A5P29400 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.11□□□□□ -2.75
COL4A5P29400 RNU6-162P-201ENST00000516228 103 ntBASIC-2.11□□□□□ -2.75
COL4A5P29400 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.11□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 225.9 ms