Protein–RNA interactions for Protein: P13727

PRG2, Bone marrow proteoglycan, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG2P13727 AL590491.3-201ENST00000610731 82 ntBASIC0.11□□□□□ -2.39
PRG2P13727 RNU6-929P-201ENST00000384429 107 ntBASIC0.1□□□□□ -2.39
PRG2P13727 RNU6-1206P-201ENST00000516339 103 ntBASIC0.1□□□□□ -2.39
PRG2P13727 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.1□□□□□ -2.39
PRG2P13727 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.1□□□□□ -2.39
PRG2P13727 MIR4743-201ENST00000584576 69 ntBASIC0.1□□□□□ -2.39
PRG2P13727 MIR6854-201ENST00000614935 69 ntBASIC0.1□□□□□ -2.39
PRG2P13727 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.1□□□□□ -2.39
PRG2P13727 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.1□□□□□ -2.39
PRG2P13727 Y_RNA.139-201ENST00000363464 102 ntBASIC0.09□□□□□ -2.4
PRG2P13727 SNORA62.4-201ENST00000365504 151 ntBASIC0.09□□□□□ -2.4
PRG2P13727 Y_RNA.613-201ENST00000410726 97 ntBASIC0.09□□□□□ -2.4
PRG2P13727 MIR3170-201ENST00000582699 77 ntBASIC0.09□□□□□ -2.4
PRG2P13727 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
PRG2P13727 MIR548AA1-201ENST00000384971 97 ntBASIC0.08□□□□□ -2.4
PRG2P13727 MIR124-2-201ENST00000385081 109 ntBASIC0.08□□□□□ -2.4
PRG2P13727 RNU6-1133P-201ENST00000410963 100 ntBASIC0.08□□□□□ -2.4
PRG2P13727 RNU6-732P-201ENST00000516033 103 ntBASIC0.08□□□□□ -2.4
PRG2P13727 SNORD38.3-201ENST00000516599 73 ntBASIC0.08□□□□□ -2.4
PRG2P13727 RNU7-160P-201ENST00000516660 62 ntBASIC0.08□□□□□ -2.4
PRG2P13727 snoR1.1-201ENST00000628177 80 ntBASIC0.08□□□□□ -2.4
PRG2P13727 MIR5190-201ENST00000581537 80 ntBASIC0.07□□□□□ -2.4
PRG2P13727 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
PRG2P13727 RNU6-930P-201ENST00000390938 100 ntBASIC0.06□□□□□ -2.4
PRG2P13727 RNU7-159P-201ENST00000459284 62 ntBASIC0.06□□□□□ -2.4
PRG2P13727 RNU6-1238P-201ENST00000517215 102 ntBASIC0.06□□□□□ -2.4
PRG2P13727 RNA5SP169-201ENST00000517268 117 ntBASIC0.06□□□□□ -2.4
PRG2P13727 MIR6851-201ENST00000617060 67 ntBASIC0.06□□□□□ -2.4
PRG2P13727 MIR429-201ENST00000362106 83 ntBASIC0.05□□□□□ -2.4
PRG2P13727 RNU6-986P-201ENST00000363133 102 ntBASIC0.05□□□□□ -2.4
PRG2P13727 RNU6-838P-201ENST00000363399 108 ntBASIC0.05□□□□□ -2.4
PRG2P13727 Y_RNA.178-201ENST00000363832 102 ntBASIC0.05□□□□□ -2.4
PRG2P13727 MIR29B1-201ENST00000385015 81 ntBASIC0.05□□□□□ -2.4
PRG2P13727 AL445193.1-201ENST00000441183 141 ntBASIC0.05□□□□□ -2.4
PRG2P13727 SNORD63.1-201ENST00000516178 80 ntBASIC0.05□□□□□ -2.4
PRG2P13727 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
PRG2P13727 SNORD49B-201ENST00000365172 72 ntBASIC0.04□□□□□ -2.4
PRG2P13727 RNU6-742P-201ENST00000365289 107 ntBASIC0.04□□□□□ -2.4
PRG2P13727 Y_RNA.433-201ENST00000384089 102 ntBASIC0.04□□□□□ -2.4
PRG2P13727 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
PRG2P13727 AL451105.1-201ENST00000450005 189 ntBASIC0.04□□□□□ -2.4
PRG2P13727 RNA5SP285-201ENST00000516619 119 ntBASIC0.04□□□□□ -2.4
PRG2P13727 RNU6-608P-201ENST00000383927 104 ntBASIC0.03□□□□□ -2.4
PRG2P13727 MIR545-201ENST00000385085 106 ntBASIC0.03□□□□□ -2.4
PRG2P13727 MIR548H4-201ENST00000408689 111 ntBASIC0.03□□□□□ -2.4
PRG2P13727 SNORD114-11-201ENST00000363738 75 ntBASIC0.02□□□□□ -2.41
PRG2P13727 RNU6-828P-201ENST00000364876 107 ntBASIC0.02□□□□□ -2.41
PRG2P13727 RNU6-46P-201ENST00000383860 107 ntBASIC0.02□□□□□ -2.41
PRG2P13727 MIR329-2-201ENST00000385029 84 ntBASIC0.02□□□□□ -2.41
PRG2P13727 SNORD63.2-201ENST00000516303 64 ntBASIC0.02□□□□□ -2.41
PRG2P13727 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
PRG2P13727 RNU6-901P-201ENST00000384593 106 ntBASIC0.01□□□□□ -2.41
PRG2P13727 RNU6-1250P-201ENST00000391218 107 ntBASIC0.01□□□□□ -2.41
PRG2P13727 RNU6-721P-201ENST00000410155 105 ntBASIC0.01□□□□□ -2.41
PRG2P13727 SNORD22.1-201ENST00000516331 125 ntBASIC0.01□□□□□ -2.41
PRG2P13727 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
PRG2P13727 RNU6-1233P-201ENST00000362922 102 ntBASIC0□□□□□ -2.41
PRG2P13727 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
PRG2P13727 Y_RNA.189-201ENST00000363959 112 ntBASIC0□□□□□ -2.41
PRG2P13727 MIR548AL-201ENST00000578416 97 ntBASIC0□□□□□ -2.41
PRG2P13727 SNORA26.4-201ENST00000391188 123 ntBASIC-0.01□□□□□ -2.41
PRG2P13727 RNU6-995P-201ENST00000391244 107 ntBASIC-0.01□□□□□ -2.41
PRG2P13727 RNA5SP66-201ENST00000517178 101 ntBASIC-0.01□□□□□ -2.41
PRG2P13727 MIR6759-201ENST00000638110 65 ntBASIC-0.01□□□□□ -2.41
PRG2P13727 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
PRG2P13727 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.02□□□□□ -2.41
PRG2P13727 RNU6-247P-201ENST00000362636 107 ntBASIC-0.03□□□□□ -2.41
PRG2P13727 SNORD74.6-201ENST00000364796 70 ntBASIC-0.03□□□□□ -2.41
PRG2P13727 SNORD114-12-201ENST00000365400 75 ntBASIC-0.03□□□□□ -2.41
PRG2P13727 MIR518B-201ENST00000385127 83 ntBASIC-0.03□□□□□ -2.41
PRG2P13727 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
PRG2P13727 SNORA18.1-201ENST00000363418 128 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 SNORD115-33-201ENST00000363723 82 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 SNORD114-17-201ENST00000364699 75 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 RNU6-530P-201ENST00000391180 107 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 RNA5SP300-201ENST00000391197 107 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 SNORD75.1-201ENST00000408373 60 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 MIR548Q-201ENST00000408404 100 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 MIR1468-201ENST00000410600 86 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 RNY3P8-201ENST00000411366 126 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 SNORD18.2-201ENST00000459604 70 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 MIR5683-201ENST00000636514 76 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 AC093726.3-201ENST00000637588 150 ntBASIC-0.04□□□□□ -2.42
PRG2P13727 RNA5SP26-201ENST00000362406 119 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 SNORA27.2-201ENST00000363365 126 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
PRG2P13727 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 AP000533.3-201ENST00000447704 118 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 MIR3179-1-201ENST00000578940 84 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 MIR3179-2-201ENST00000579107 84 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 MIR3179-3-201ENST00000579566 84 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 MIR3666-201ENST00000607845 111 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 MIR3179-4-201ENST00000617599 84 ntBASIC-0.05□□□□□ -2.42
PRG2P13727 RPL35AP4-201ENST00000412007 102 ntBASIC-0.06□□□□□ -2.42
PRG2P13727 SNORD4A-201ENST00000459174 72 ntBASIC-0.06□□□□□ -2.42
PRG2P13727 MIR4788-201ENST00000639104 80 ntBASIC-0.06□□□□□ -2.42
PRG2P13727 SNORA32.1-201ENST00000364514 115 ntBASIC-0.07□□□□□ -2.42
PRG2P13727 MIR581-201ENST00000384895 96 ntBASIC-0.07□□□□□ -2.42
PRG2P13727 AL353691.2-201ENST00000443795 59 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms