Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNU6-563P-201ENST00000364872 108 ntBASIC-2.68□□□□□ -2.84
HMGB1P09429 RNU6-119P-201ENST00000364882 107 ntBASIC-2.68□□□□□ -2.84
HMGB1P09429 RNY4P18-201ENST00000391107 89 ntBASIC-2.68□□□□□ -2.84
HMGB1P09429 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.68□□□□□ -2.84
HMGB1P09429 MIR548AM-201ENST00000584298 74 ntBASIC-2.69□□□□□ -2.84
HMGB1P09429 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.69□□□□□ -2.84
HMGB1P09429 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.7□□□□□ -2.84
HMGB1P09429 MIR4756-201ENST00000577874 78 ntBASIC-2.7□□□□□ -2.84
HMGB1P09429 MIR664B-201ENST00000626756 61 ntBASIC-2.7□□□□□ -2.84
HMGB1P09429 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.71□□□□□ -2.84
HMGB1P09429 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.71□□□□□ -2.84
HMGB1P09429 RNU6-267P-201ENST00000516714 103 ntBASIC-2.71□□□□□ -2.84
HMGB1P09429 MIR3675-201ENST00000583661 73 ntBASIC-2.71□□□□□ -2.84
HMGB1P09429 U2.18-201ENST00000622185 84 ntBASIC-2.71□□□□□ -2.84
HMGB1P09429 MIR3170-201ENST00000582699 77 ntBASIC-2.72□□□□□ -2.84
HMGB1P09429 MIR4723-201ENST00000585070 81 ntBASIC-2.72□□□□□ -2.84
HMGB1P09429 RNU6-219P-201ENST00000364728 107 ntBASIC-2.73□□□□□ -2.85
HMGB1P09429 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.73□□□□□ -2.85
HMGB1P09429 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.73□□□□□ -2.85
HMGB1P09429 MIR3910-1-201ENST00000580936 111 ntBASIC-2.73□□□□□ -2.85
HMGB1P09429 MIR548BB-201ENST00000626714 66 ntBASIC-2.73□□□□□ -2.85
HMGB1P09429 RNU6-698P-201ENST00000363523 107 ntBASIC-2.74□□□□□ -2.85
HMGB1P09429 RNU6-34P-201ENST00000364874 107 ntBASIC-2.74□□□□□ -2.85
HMGB1P09429 RNU6-258P-201ENST00000390884 101 ntBASIC-2.74□□□□□ -2.85
HMGB1P09429 RNU6-303P-201ENST00000517091 106 ntBASIC-2.74□□□□□ -2.85
HMGB1P09429 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.74□□□□□ -2.85
HMGB1P09429 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.75□□□□□ -2.85
HMGB1P09429 RNU6-330P-201ENST00000363015 107 ntBASIC-2.76□□□□□ -2.85
HMGB1P09429 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.76□□□□□ -2.85
HMGB1P09429 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.76□□□□□ -2.85
HMGB1P09429 SNORA8.1-201ENST00000384250 140 ntBASIC-2.76□□□□□ -2.85
HMGB1P09429 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.76□□□□□ -2.85
HMGB1P09429 U4.4-201ENST00000620626 117 ntBASIC-2.76□□□□□ -2.85
HMGB1P09429 RNU6-247P-201ENST00000362636 107 ntBASIC-2.77□□□□□ -2.85
HMGB1P09429 MIR548AA1-201ENST00000384971 97 ntBASIC-2.77□□□□□ -2.85
HMGB1P09429 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.77□□□□□ -2.85
HMGB1P09429 RNU6-557P-201ENST00000516842 110 ntBASIC-2.77□□□□□ -2.85
HMGB1P09429 RNU6-980P-201ENST00000516925 103 ntBASIC-2.77□□□□□ -2.85
HMGB1P09429 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.78□□□□□ -2.85
HMGB1P09429 RNU6-686P-201ENST00000364839 107 ntBASIC-2.79□□□□□ -2.86
HMGB1P09429 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.79□□□□□ -2.86
HMGB1P09429 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.8□□□□□ -2.86
HMGB1P09429 RNU6-118P-201ENST00000516552 102 ntBASIC-2.8□□□□□ -2.86
HMGB1P09429 RNU6-982P-201ENST00000516216 102 ntBASIC-2.81□□□□□ -2.86
HMGB1P09429 MIR548V-201ENST00000584165 80 ntBASIC-2.81□□□□□ -2.86
HMGB1P09429 MIR496-201ENST00000385226 102 ntBASIC-2.82□□□□□ -2.86
HMGB1P09429 RNU6-604P-201ENST00000390917 100 ntBASIC-2.82□□□□□ -2.86
HMGB1P09429 RNU4-88P-201ENST00000411220 86 ntBASIC-2.82□□□□□ -2.86
HMGB1P09429 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.84□□□□□ -2.86
HMGB1P09429 SNORD45.1-201ENST00000363181 77 ntBASIC-2.85□□□□□ -2.87
HMGB1P09429 RNU6-32P-201ENST00000383948 107 ntBASIC-2.85□□□□□ -2.87
HMGB1P09429 RNU6-13P-201ENST00000384248 107 ntBASIC-2.85□□□□□ -2.87
HMGB1P09429 RNU6-12P-201ENST00000384604 107 ntBASIC-2.85□□□□□ -2.87
HMGB1P09429 RNU6-41P-201ENST00000384741 107 ntBASIC-2.85□□□□□ -2.87
HMGB1P09429 RNU6-129P-201ENST00000391022 107 ntBASIC-2.85□□□□□ -2.87
HMGB1P09429 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.86□□□□□ -2.87
HMGB1P09429 SNORD116-16-201ENST00000384533 92 ntBASIC-2.87□□□□□ -2.87
HMGB1P09429 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.88□□□□□ -2.87
HMGB1P09429 MIR630-201ENST00000384957 97 ntBASIC-2.88□□□□□ -2.87
HMGB1P09429 SNORD113-2-201ENST00000391082 72 ntBASIC-2.88□□□□□ -2.87
HMGB1P09429 RNU6-755P-201ENST00000364400 103 ntBASIC-2.89□□□□□ -2.87
HMGB1P09429 RNU6-497P-201ENST00000365316 104 ntBASIC-2.89□□□□□ -2.87
HMGB1P09429 RNU6-995P-201ENST00000391244 107 ntBASIC-2.89□□□□□ -2.87
HMGB1P09429 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.89□□□□□ -2.87
HMGB1P09429 AC013734.1-201ENST00000619329 111 ntBASIC-2.89□□□□□ -2.87
HMGB1P09429 SNORA27.2-201ENST00000363365 126 ntBASIC-2.9□□□□□ -2.87
HMGB1P09429 MIR488-201ENST00000365739 83 ntBASIC-2.9□□□□□ -2.87
HMGB1P09429 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.91□□□□□ -2.88
HMGB1P09429 SNORA63.4-201ENST00000362763 126 ntBASIC-2.91□□□□□ -2.88
HMGB1P09429 RNU6-194P-201ENST00000363862 105 ntBASIC-2.91□□□□□ -2.88
HMGB1P09429 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.91□□□□□ -2.88
HMGB1P09429 MTND4LP1-201ENST00000446263 157 ntBASIC-2.91□□□□□ -2.88
HMGB1P09429 RNA5SP215-201ENST00000363440 122 ntBASIC-2.92□□□□□ -2.88
HMGB1P09429 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.92□□□□□ -2.88
HMGB1P09429 AC074348.1-201ENST00000426503 132 ntBASIC-2.92□□□□□ -2.88
HMGB1P09429 SNORD54-201ENST00000459159 67 ntBASIC-2.92□□□□□ -2.88
HMGB1P09429 MIR4484-201ENST00000582855 83 ntBASIC-2.92□□□□□ -2.88
HMGB1P09429 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.92□□□□□ -2.88
HMGB1P09429 U6.97-201ENST00000636904 101 ntBASIC-2.92□□□□□ -2.88
HMGB1P09429 RNA5SP405-201ENST00000363059 114 ntBASIC-2.93□□□□□ -2.88
HMGB1P09429 SNORD1B-201ENST00000363091 84 ntBASIC-2.93□□□□□ -2.88
HMGB1P09429 RNU6-380P-201ENST00000410207 107 ntBASIC-2.93□□□□□ -2.88
HMGB1P09429 AL606753.1-201ENST00000427435 87 ntBASIC-2.94□□□□□ -2.88
HMGB1P09429 SNORD63.2-201ENST00000516303 64 ntBASIC-2.94□□□□□ -2.88
HMGB1P09429 AC005520.4-201ENST00000604337 90 ntBASIC-2.94□□□□□ -2.88
HMGB1P09429 AC006160.2-201ENST00000637708 154 ntBASIC-2.94□□□□□ -2.88
HMGB1P09429 MIR3139-201ENST00000579145 76 ntBASIC-2.95□□□□□ -2.88
HMGB1P09429 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.95□□□□□ -2.88
HMGB1P09429 RNA5SP173-201ENST00000364857 136 ntBASIC-2.96□□□□□ -2.88
HMGB1P09429 RNU6-844P-201ENST00000517175 102 ntBASIC-2.96□□□□□ -2.88
HMGB1P09429 RNU6-640P-201ENST00000363693 105 ntBASIC-2.97□□□□□ -2.88
HMGB1P09429 RNU6-669P-201ENST00000365575 107 ntBASIC-2.97□□□□□ -2.88
HMGB1P09429 SNORA41B-201ENST00000384785 128 ntBASIC-2.97□□□□□ -2.88
HMGB1P09429 snoU13.10-201ENST00000459301 103 ntBASIC-2.97□□□□□ -2.88
HMGB1P09429 RNU7-151P-201ENST00000516930 53 ntBASIC-2.97□□□□□ -2.88
HMGB1P09429 RNU6-668P-201ENST00000364180 107 ntBASIC-2.98□□□□□ -2.89
HMGB1P09429 MIR548W-201ENST00000581970 74 ntBASIC-2.98□□□□□ -2.89
HMGB1P09429 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.98□□□□□ -2.89
HMGB1P09429 MIR1297-201ENST00000637311 77 ntBASIC-2.98□□□□□ -2.89
HMGB1P09429 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.99□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms