Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.97□□□□□ -2.88
APOBP04114 MIR548H4-201ENST00000408689 111 ntBASIC-2.97□□□□□ -2.88
APOBP04114 MIR4282-201ENST00000583613 67 ntBASIC-2.97□□□□□ -2.88
APOBP04114 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.97□□□□□ -2.89
APOBP04114 RNU6-275P-201ENST00000364910 107 ntBASIC-2.97□□□□□ -2.89
APOBP04114 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.97□□□□□ -2.89
APOBP04114 RNU6-620P-201ENST00000384017 96 ntBASIC-2.98□□□□□ -2.89
APOBP04114 RNU6-770P-201ENST00000363929 105 ntBASIC-2.98□□□□□ -2.89
APOBP04114 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.98□□□□□ -2.89
APOBP04114 RNU6-876P-201ENST00000391295 104 ntBASIC-2.98□□□□□ -2.89
APOBP04114 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.98□□□□□ -2.89
APOBP04114 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.99□□□□□ -2.89
APOBP04114 RNU6-239P-201ENST00000390990 99 ntBASIC-2.99□□□□□ -2.89
APOBP04114 RNU7-125P-201ENST00000458760 62 ntBASIC-2.99□□□□□ -2.89
APOBP04114 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.99□□□□□ -2.89
APOBP04114 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.99□□□□□ -2.89
APOBP04114 RNU6-659P-201ENST00000516454 104 ntBASIC-2.99□□□□□ -2.89
APOBP04114 AP001340.1-201ENST00000624405 217 ntBASIC-2.99□□□□□ -2.89
APOBP04114 MIRLET7A1-201ENST00000362295 80 ntBASIC-3□□□□□ -2.89
APOBP04114 Y_RNA.194-201ENST00000363985 102 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-11-201ENST00000408051 138 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-9-201ENST00000408365 138 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-10-201ENST00000408734 138 ntBASIC-3□□□□□ -2.89
APOBP04114 MIR1302-2-201ENST00000607096 138 ntBASIC-3□□□□□ -2.89
APOBP04114 RNU6-986P-201ENST00000363133 102 ntBASIC-3□□□□□ -2.89
APOBP04114 DEFB108C-201ENST00000400154 252 ntBASIC-3□□□□□ -2.89
APOBP04114 RNU6-915P-201ENST00000364943 103 ntBASIC-3.01□□□□□ -2.89
APOBP04114 MIR4668-201ENST00000582284 70 ntBASIC-3.01□□□□□ -2.89
APOBP04114 SNORA25.5-201ENST00000363782 126 ntBASIC-3.01□□□□□ -2.89
APOBP04114 RNU6-904P-201ENST00000516206 101 ntBASIC-3.01□□□□□ -2.89
APOBP04114 SNORD116-24-201ENST00000384549 92 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNU6-808P-201ENST00000391233 108 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNY3P15-201ENST00000516297 97 ntBASIC-3.02□□□□□ -2.89
APOBP04114 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.02□□□□□ -2.89
APOBP04114 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.02□□□□□ -2.89
APOBP04114 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.02□□□□□ -2.89
APOBP04114 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.02□□□□□ -2.89
APOBP04114 SNORD11.1-201ENST00000459482 85 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNU6-122P-201ENST00000516818 107 ntBASIC-3.02□□□□□ -2.89
APOBP04114 MIR2052-201ENST00000636055 55 ntBASIC-3.02□□□□□ -2.89
APOBP04114 RNU6-460P-201ENST00000391158 108 ntBASIC-3.03□□□□□ -2.89
APOBP04114 SCARNA15.1-201ENST00000516384 125 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNY3P16-201ENST00000516338 101 ntBASIC-3.03□□□□□ -2.89
APOBP04114 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNU6-121P-201ENST00000410525 99 ntBASIC-3.03□□□□□ -2.89
APOBP04114 RNU6-411P-201ENST00000384451 107 ntBASIC-3.04□□□□□ -2.9
APOBP04114 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.04□□□□□ -2.9
APOBP04114 RNU7-30P-201ENST00000516835 62 ntBASIC-3.04□□□□□ -2.9
APOBP04114 RNU6-751P-201ENST00000516382 101 ntBASIC-3.04□□□□□ -2.9
APOBP04114 AC113139.1-201ENST00000605049 239 ntBASIC-3.05□□□□□ -2.9
APOBP04114 SNORD58B-201ENST00000607313 66 ntBASIC-3.05□□□□□ -2.9
APOBP04114 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.05□□□□□ -2.9
APOBP04114 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-3.05□□□□□ -2.9
APOBP04114 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.05□□□□□ -2.9
APOBP04114 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.05□□□□□ -2.9
APOBP04114 RNU6-70P-201ENST00000516438 60 ntBASIC-3.05□□□□□ -2.9
APOBP04114 AL160413.1-201ENST00000622780 310 ntBASIC-3.05□□□□□ -2.9
APOBP04114 AL157777.2-201ENST00000258070 137 ntBASIC-3.06□□□□□ -2.9
APOBP04114 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.06□□□□□ -2.9
APOBP04114 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.06□□□□□ -2.9
APOBP04114 AC109635.3-201ENST00000529536 185 ntBASIC-3.06□□□□□ -2.9
APOBP04114 SNORD58.1-201ENST00000391313 66 ntBASIC-3.06□□□□□ -2.9
APOBP04114 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.08□□□□□ -2.9
APOBP04114 SNORD58C-201ENST00000365223 64 ntBASIC-3.08□□□□□ -2.9
APOBP04114 RNU6-259P-201ENST00000383999 107 ntBASIC-3.08□□□□□ -2.9
APOBP04114 MTATP6P25-201ENST00000574491 261 ntBASIC-3.08□□□□□ -2.9
APOBP04114 RNY4P19-201ENST00000362530 96 ntBASIC-3.09□□□□□ -2.9
APOBP04114 SNORD127-201ENST00000458892 86 ntBASIC-3.09□□□□□ -2.9
APOBP04114 RNU6-988P-201ENST00000519081 107 ntBASIC-3.09□□□□□ -2.9
APOBP04114 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.09□□□□□ -2.9
APOBP04114 RNU6-823P-201ENST00000391042 103 ntBASIC-3.09□□□□□ -2.9
APOBP04114 AL158147.1-201ENST00000443970 75 ntBASIC-3.09□□□□□ -2.9
APOBP04114 U7.3-201ENST00000616123 62 ntBASIC-3.09□□□□□ -2.9
APOBP04114 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.1□□□□□ -2.91
APOBP04114 RNU6-895P-201ENST00000384125 103 ntBASIC-3.1□□□□□ -2.91
APOBP04114 MIR154-201ENST00000385243 84 ntBASIC-3.1□□□□□ -2.91
APOBP04114 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.1□□□□□ -2.91
APOBP04114 RNU6-633P-201ENST00000362612 103 ntBASIC-3.11□□□□□ -2.91
APOBP04114 MIR1252-201ENST00000408861 65 ntBASIC-3.11□□□□□ -2.91
APOBP04114 U7.2-201ENST00000607576 63 ntBASIC-3.11□□□□□ -2.91
APOBP04114 MTND4LP32-201ENST00000636111 270 ntBASIC-3.12□□□□□ -2.91
APOBP04114 RNU7-152P-201ENST00000458982 64 ntBASIC-3.12□□□□□ -2.91
APOBP04114 RNU6-314P-201ENST00000516574 104 ntBASIC-3.12□□□□□ -2.91
APOBP04114 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.12□□□□□ -2.91
APOBP04114 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.13□□□□□ -2.91
APOBP04114 RNU4-33P-201ENST00000364316 85 ntBASIC-3.13□□□□□ -2.91
APOBP04114 SNORD116-29-201ENST00000384516 83 ntBASIC-3.14□□□□□ -2.91
APOBP04114 MIR3938-201ENST00000582157 103 ntBASIC-3.14□□□□□ -2.91
APOBP04114 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.14□□□□□ -2.91
APOBP04114 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.14□□□□□ -2.91
APOBP04114 RNU6-780P-201ENST00000391030 104 ntBASIC-3.15□□□□□ -2.91
APOBP04114 RNU6-838P-201ENST00000363399 108 ntBASIC-3.15□□□□□ -2.91
APOBP04114 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.15□□□□□ -2.91
APOBP04114 AC009094.1-201ENST00000564443 426 ntBASIC-3.15□□□□□ -2.91
APOBP04114 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.15□□□□□ -2.91
APOBP04114 RNU6-956P-201ENST00000458868 103 ntBASIC-3.16□□□□□ -2.92
APOBP04114 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.17□□□□□ -2.92
APOBP04114 RNU6-574P-201ENST00000384265 107 ntBASIC-3.17□□□□□ -2.92
APOBP04114 SNORD116-22-201ENST00000384430 92 ntBASIC-3.17□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms