Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 RNU6-219P-201ENST00000364728 107 ntBASIC-1.78□□□□□ -2.69
OPN1SWP03999 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.78□□□□□ -2.69
OPN1SWP03999 SNORD116-16-201ENST00000384533 92 ntBASIC-1.78□□□□□ -2.69
OPN1SWP03999 AC108019.1-201ENST00000512540 175 ntBASIC-1.78□□□□□ -2.69
OPN1SWP03999 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.78□□□□□ -2.69
OPN1SWP03999 AL365222.1-201ENST00000614661 98 ntBASIC-1.78□□□□□ -2.69
OPN1SWP03999 RNU6-668P-201ENST00000364180 107 ntBASIC-1.79□□□□□ -2.7
OPN1SWP03999 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.79□□□□□ -2.7
OPN1SWP03999 MTND4LP1-201ENST00000446263 157 ntBASIC-1.79□□□□□ -2.7
OPN1SWP03999 RNU6-589P-201ENST00000516485 107 ntBASIC-1.79□□□□□ -2.7
OPN1SWP03999 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.79□□□□□ -2.7
OPN1SWP03999 SNORD1B-201ENST00000363091 84 ntBASIC-1.8□□□□□ -2.7
OPN1SWP03999 SNORD113.1-201ENST00000363280 73 ntBASIC-1.8□□□□□ -2.7
OPN1SWP03999 MIR579-201ENST00000385221 98 ntBASIC-1.8□□□□□ -2.7
OPN1SWP03999 RNU6-983P-201ENST00000516004 103 ntBASIC-1.8□□□□□ -2.7
OPN1SWP03999 AC013734.1-201ENST00000619329 111 ntBASIC-1.8□□□□□ -2.7
OPN1SWP03999 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.8□□□□□ -2.7
OPN1SWP03999 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 RNU6-497P-201ENST00000365316 104 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
OPN1SWP03999 RNU6-129P-201ENST00000391022 107 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 MIR4756-201ENST00000577874 78 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 MIR664A-201ENST00000626086 82 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 U6.97-201ENST00000636904 101 ntBASIC-1.81□□□□□ -2.7
OPN1SWP03999 MIR450A1-201ENST00000362262 91 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 RNA5SP215-201ENST00000363440 122 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 SNORD45A-201ENST00000384512 84 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 RNU7-151P-201ENST00000516930 53 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 MIR548AM-201ENST00000584298 74 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.82□□□□□ -2.7
OPN1SWP03999 RNU6-841P-201ENST00000383872 107 ntBASIC-1.83□□□□□ -2.7
OPN1SWP03999 RNY4P18-201ENST00000391107 89 ntBASIC-1.83□□□□□ -2.7
OPN1SWP03999 AL031737.1-201ENST00000450125 223 ntBASIC-1.83□□□□□ -2.7
OPN1SWP03999 AC005520.4-201ENST00000604337 90 ntBASIC-1.83□□□□□ -2.7
OPN1SWP03999 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.83□□□□□ -2.7
OPN1SWP03999 SNORD63.2-201ENST00000516303 64 ntBASIC-1.84□□□□□ -2.7
OPN1SWP03999 RNU6-794P-201ENST00000517261 64 ntBASIC-1.84□□□□□ -2.7
OPN1SWP03999 AP001318.4-201ENST00000616637 121 ntBASIC-1.84□□□□□ -2.7
OPN1SWP03999 MALAT1.1-201ENST00000618249 95 ntBASIC-1.84□□□□□ -2.7
OPN1SWP03999 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.84□□□□□ -2.7
OPN1SWP03999 RNU6-669P-201ENST00000365575 107 ntBASIC-1.85□□□□□ -2.71
OPN1SWP03999 RNU6-995P-201ENST00000391244 107 ntBASIC-1.85□□□□□ -2.71
OPN1SWP03999 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.86□□□□□ -2.71
OPN1SWP03999 SNORA40.13-201ENST00000516379 120 ntBASIC-1.86□□□□□ -2.71
OPN1SWP03999 RNU6-209P-201ENST00000384118 107 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 RNU6-172P-201ENST00000411000 93 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 RNU4-88P-201ENST00000411220 86 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 MIR8053-201ENST00000613344 75 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 MIR7978-201ENST00000636158 59 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 MIR1297-201ENST00000637311 77 ntBASIC-1.87□□□□□ -2.71
OPN1SWP03999 SNORA27.2-201ENST00000363365 126 ntBASIC-1.88□□□□□ -2.71
OPN1SWP03999 RNU6-974P-201ENST00000384099 108 ntBASIC-1.88□□□□□ -2.71
OPN1SWP03999 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.88□□□□□ -2.71
OPN1SWP03999 RNY3P8-201ENST00000411366 126 ntBASIC-1.88□□□□□ -2.71
OPN1SWP03999 RNU6-834P-201ENST00000362367 110 ntBASIC-1.89□□□□□ -2.71
OPN1SWP03999 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.89□□□□□ -2.71
OPN1SWP03999 RNU6-980P-201ENST00000516925 103 ntBASIC-1.89□□□□□ -2.71
OPN1SWP03999 SNORA63.4-201ENST00000362763 126 ntBASIC-1.9□□□□□ -2.71
OPN1SWP03999 SNORD115-31-201ENST00000365318 82 ntBASIC-1.9□□□□□ -2.71
OPN1SWP03999 RNU6-380P-201ENST00000410207 107 ntBASIC-1.9□□□□□ -2.71
OPN1SWP03999 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.91□□□□□ -2.72
OPN1SWP03999 RNA5SP173-201ENST00000364857 136 ntBASIC-1.91□□□□□ -2.72
OPN1SWP03999 RNU6-81P-201ENST00000365608 104 ntBASIC-1.91□□□□□ -2.72
OPN1SWP03999 MIR664B-201ENST00000626756 61 ntBASIC-1.91□□□□□ -2.72
OPN1SWP03999 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.91□□□□□ -2.72
OPN1SWP03999 AC006160.2-201ENST00000637708 154 ntBASIC-1.91□□□□□ -2.72
OPN1SWP03999 MIR488-201ENST00000365739 83 ntBASIC-1.92□□□□□ -2.72
OPN1SWP03999 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.92□□□□□ -2.72
OPN1SWP03999 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.93□□□□□ -2.72
OPN1SWP03999 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.93□□□□□ -2.72
OPN1SWP03999 RNU6-523P-201ENST00000516304 54 ntBASIC-1.93□□□□□ -2.72
OPN1SWP03999 RNU6-755P-201ENST00000364400 103 ntBASIC-1.94□□□□□ -2.72
OPN1SWP03999 snoU13.10-201ENST00000459301 103 ntBASIC-1.94□□□□□ -2.72
OPN1SWP03999 RNU6-675P-201ENST00000384236 104 ntBASIC-1.95□□□□□ -2.72
OPN1SWP03999 SNORD116-24-201ENST00000384549 92 ntBASIC-1.95□□□□□ -2.72
OPN1SWP03999 MIR125B1-201ENST00000385236 88 ntBASIC-1.95□□□□□ -2.72
OPN1SWP03999 MIR548W-201ENST00000581970 74 ntBASIC-1.95□□□□□ -2.72
OPN1SWP03999 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.96□□□□□ -2.72
OPN1SWP03999 RNU6-22P-201ENST00000384355 107 ntBASIC-1.96□□□□□ -2.72
OPN1SWP03999 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.96□□□□□ -2.72
OPN1SWP03999 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.97□□□□□ -2.72
OPN1SWP03999 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.97□□□□□ -2.72
OPN1SWP03999 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.97□□□□□ -2.72
OPN1SWP03999 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.98□□□□□ -2.73
OPN1SWP03999 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.98□□□□□ -2.73
OPN1SWP03999 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.98□□□□□ -2.73
OPN1SWP03999 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.99□□□□□ -2.73
OPN1SWP03999 RNU6-119P-201ENST00000364882 107 ntBASIC-1.99□□□□□ -2.73
OPN1SWP03999 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.99□□□□□ -2.73
OPN1SWP03999 MIR581-201ENST00000384895 96 ntBASIC-1.99□□□□□ -2.73
OPN1SWP03999 snosnR66.1-201ENST00000391095 99 ntBASIC-1.99□□□□□ -2.73
OPN1SWP03999 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.99□□□□□ -2.73
OPN1SWP03999 RNU6-844P-201ENST00000517175 102 ntBASIC-1.99□□□□□ -2.73
OPN1SWP03999 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms