Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-686P-201ENST00000364839 107 ntBASIC-2.31□□□□□ -2.78
UPK1BO75841 SNORD116-22-201ENST00000384430 92 ntBASIC-2.32□□□□□ -2.78
UPK1BO75841 MIR630-201ENST00000384957 97 ntBASIC-2.32□□□□□ -2.78
UPK1BO75841 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.32□□□□□ -2.78
UPK1BO75841 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.32□□□□□ -2.78
UPK1BO75841 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.33□□□□□ -2.78
UPK1BO75841 RNU6-267P-201ENST00000516714 103 ntBASIC-2.33□□□□□ -2.78
UPK1BO75841 MIR548BB-201ENST00000626714 66 ntBASIC-2.33□□□□□ -2.78
UPK1BO75841 MIR2052-201ENST00000636055 55 ntBASIC-2.33□□□□□ -2.78
UPK1BO75841 RNU6-219P-201ENST00000364728 107 ntBASIC-2.34□□□□□ -2.78
UPK1BO75841 RNU6-402P-201ENST00000410678 103 ntBASIC-2.34□□□□□ -2.78
UPK1BO75841 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.34□□□□□ -2.78
UPK1BO75841 MIR4484-201ENST00000582855 83 ntBASIC-2.34□□□□□ -2.78
UPK1BO75841 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.35□□□□□ -2.79
UPK1BO75841 MIR23C-201ENST00000579846 100 ntBASIC-2.35□□□□□ -2.79
UPK1BO75841 MIR3133-201ENST00000583157 78 ntBASIC-2.35□□□□□ -2.79
UPK1BO75841 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 RNU6-959P-201ENST00000384671 107 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 AC008267.6-201ENST00000441664 139 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 MTND4LP1-201ENST00000446263 157 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 RNU6-589P-201ENST00000516485 107 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 MIR3170-201ENST00000582699 77 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 MIR4723-201ENST00000585070 81 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 MIR4719-201ENST00000585233 84 ntBASIC-2.36□□□□□ -2.79
UPK1BO75841 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.37□□□□□ -2.79
UPK1BO75841 SNORD113-2-201ENST00000391082 72 ntBASIC-2.37□□□□□ -2.79
UPK1BO75841 AC120024.2-201ENST00000576526 175 ntBASIC-2.37□□□□□ -2.79
UPK1BO75841 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.37□□□□□ -2.79
UPK1BO75841 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.38□□□□□ -2.79
UPK1BO75841 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.38□□□□□ -2.79
UPK1BO75841 AL365222.1-201ENST00000614661 98 ntBASIC-2.38□□□□□ -2.79
UPK1BO75841 MIR450A1-201ENST00000362262 91 ntBASIC-2.39□□□□□ -2.79
UPK1BO75841 RNU6-668P-201ENST00000364180 107 ntBASIC-2.39□□□□□ -2.79
UPK1BO75841 RNU6-497P-201ENST00000365316 104 ntBASIC-2.39□□□□□ -2.79
UPK1BO75841 MIR548AA1-201ENST00000384971 97 ntBASIC-2.39□□□□□ -2.79
UPK1BO75841 RNU6-129P-201ENST00000391022 107 ntBASIC-2.39□□□□□ -2.79
UPK1BO75841 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.39□□□□□ -2.79
UPK1BO75841 SNORD54-201ENST00000459159 67 ntBASIC-2.39□□□□□ -2.79
UPK1BO75841 MALAT1.1-201ENST00000618249 95 ntBASIC-2.4□□□□□ -2.79
UPK1BO75841 RNU6-247P-201ENST00000362636 107 ntBASIC-2.41□□□□□ -2.8
UPK1BO75841 RNU6-563P-201ENST00000364872 108 ntBASIC-2.41□□□□□ -2.8
UPK1BO75841 SNORD116-16-201ENST00000384533 92 ntBASIC-2.41□□□□□ -2.8
UPK1BO75841 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
UPK1BO75841 AL031737.1-201ENST00000450125 223 ntBASIC-2.41□□□□□ -2.8
UPK1BO75841 RNA5SP215-201ENST00000363440 122 ntBASIC-2.42□□□□□ -2.8
UPK1BO75841 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.42□□□□□ -2.8
UPK1BO75841 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.42□□□□□ -2.8
UPK1BO75841 RNU6-258P-201ENST00000390884 101 ntBASIC-2.43□□□□□ -2.8
UPK1BO75841 SNORD113.1-201ENST00000363280 73 ntBASIC-2.44□□□□□ -2.8
UPK1BO75841 MIR1297-201ENST00000637311 77 ntBASIC-2.44□□□□□ -2.8
UPK1BO75841 SNORA41B-201ENST00000384785 128 ntBASIC-2.45□□□□□ -2.8
UPK1BO75841 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.45□□□□□ -2.8
UPK1BO75841 MIR466-201ENST00000580653 84 ntBASIC-2.45□□□□□ -2.8
UPK1BO75841 MIR8053-201ENST00000613344 75 ntBASIC-2.45□□□□□ -2.8
UPK1BO75841 SNORA40.13-201ENST00000516379 120 ntBASIC-2.46□□□□□ -2.8
UPK1BO75841 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.46□□□□□ -2.8
UPK1BO75841 AP001318.4-201ENST00000616637 121 ntBASIC-2.46□□□□□ -2.8
UPK1BO75841 SNORD1B-201ENST00000363091 84 ntBASIC-2.47□□□□□ -2.8
UPK1BO75841 SNORD45A-201ENST00000384512 84 ntBASIC-2.47□□□□□ -2.8
UPK1BO75841 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.48□□□□□ -2.81
UPK1BO75841 RNU6-794P-201ENST00000517261 64 ntBASIC-2.48□□□□□ -2.81
UPK1BO75841 RNA5SP173-201ENST00000364857 136 ntBASIC-2.49□□□□□ -2.81
UPK1BO75841 RNY4P18-201ENST00000391107 89 ntBASIC-2.49□□□□□ -2.81
UPK1BO75841 RNU6-380P-201ENST00000410207 107 ntBASIC-2.49□□□□□ -2.81
UPK1BO75841 MIR4748-201ENST00000578076 82 ntBASIC-2.49□□□□□ -2.81
UPK1BO75841 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.49□□□□□ -2.81
UPK1BO75841 MIR664A-201ENST00000626086 82 ntBASIC-2.49□□□□□ -2.81
UPK1BO75841 RNU6-834P-201ENST00000362367 110 ntBASIC-2.5□□□□□ -2.81
UPK1BO75841 RNA5SP93-201ENST00000362525 114 ntBASIC-2.5□□□□□ -2.81
UPK1BO75841 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.5□□□□□ -2.81
UPK1BO75841 RNU6-995P-201ENST00000391244 107 ntBASIC-2.5□□□□□ -2.81
UPK1BO75841 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.5□□□□□ -2.81
UPK1BO75841 AC006160.2-201ENST00000637708 154 ntBASIC-2.5□□□□□ -2.81
UPK1BO75841 RNU6-209P-201ENST00000384118 107 ntBASIC-2.51□□□□□ -2.81
UPK1BO75841 SNORD115-31-201ENST00000365318 82 ntBASIC-2.52□□□□□ -2.81
UPK1BO75841 RNU7-151P-201ENST00000516930 53 ntBASIC-2.52□□□□□ -2.81
UPK1BO75841 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.52□□□□□ -2.81
UPK1BO75841 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.53□□□□□ -2.81
UPK1BO75841 SNORA63.4-201ENST00000362763 126 ntBASIC-2.53□□□□□ -2.81
UPK1BO75841 MIR579-201ENST00000385221 98 ntBASIC-2.53□□□□□ -2.81
UPK1BO75841 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.54□□□□□ -2.82
UPK1BO75841 RNU6-81P-201ENST00000365608 104 ntBASIC-2.54□□□□□ -2.82
UPK1BO75841 MIR548W-201ENST00000581970 74 ntBASIC-2.54□□□□□ -2.82
UPK1BO75841 MIR488-201ENST00000365739 83 ntBASIC-2.55□□□□□ -2.82
UPK1BO75841 SNORD63.2-201ENST00000516303 64 ntBASIC-2.55□□□□□ -2.82
UPK1BO75841 RNU6-755P-201ENST00000364400 103 ntBASIC-2.56□□□□□ -2.82
UPK1BO75841 RNU6-675P-201ENST00000384236 104 ntBASIC-2.56□□□□□ -2.82
UPK1BO75841 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.56□□□□□ -2.82
UPK1BO75841 snoU13.10-201ENST00000459301 103 ntBASIC-2.56□□□□□ -2.82
UPK1BO75841 AC013734.1-201ENST00000619329 111 ntBASIC-2.57□□□□□ -2.82
UPK1BO75841 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.57□□□□□ -2.82
UPK1BO75841 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.58□□□□□ -2.82
UPK1BO75841 SNORA27.2-201ENST00000363365 126 ntBASIC-2.58□□□□□ -2.82
UPK1BO75841 RNU6-669P-201ENST00000365575 107 ntBASIC-2.58□□□□□ -2.82
UPK1BO75841 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.58□□□□□ -2.82
UPK1BO75841 RNU6-172P-201ENST00000411000 93 ntBASIC-2.58□□□□□ -2.82
UPK1BO75841 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.59□□□□□ -2.82
UPK1BO75841 RNU6-844P-201ENST00000517175 102 ntBASIC-2.59□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms