Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SNORD113.1-201ENST00000363280 73 ntBASIC-3.31□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-828P-201ENST00000364876 107 ntBASIC-3.31□□□□□ -2.94
TRAV1-2A0A0B4J238 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.31□□□□□ -2.94
TRAV1-2A0A0B4J238 MTATP8P2-201ENST00000435212 202 ntBASIC-3.31□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-633P-201ENST00000362612 103 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 MIR509-1-201ENST00000385265 94 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 MIR509-2-201ENST00000390724 91 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-402P-201ENST00000410678 103 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 U7.3-201ENST00000616123 62 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.32□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-162P-201ENST00000516228 103 ntBASIC-3.33□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-971P-201ENST00000516920 106 ntBASIC-3.33□□□□□ -2.94
TRAV1-2A0A0B4J238 MIR8053-201ENST00000613344 75 ntBASIC-3.33□□□□□ -2.94
TRAV1-2A0A0B4J238 AC093729.1-201ENST00000513074 128 ntBASIC-3.34□□□□□ -2.94
TRAV1-2A0A0B4J238 RNU6-111P-201ENST00000517179 105 ntBASIC-3.34□□□□□ -2.94
TRAV1-2A0A0B4J238 RNA5SP106-201ENST00000517274 100 ntBASIC-3.34□□□□□ -2.94
TRAV1-2A0A0B4J238 AL731768.1-201ENST00000603124 139 ntBASIC-3.34□□□□□ -2.94
TRAV1-2A0A0B4J238 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.35□□□□□ -2.95
TRAV1-2A0A0B4J238 RNU6-686P-201ENST00000364839 107 ntBASIC-3.35□□□□□ -2.95
TRAV1-2A0A0B4J238 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.35□□□□□ -2.95
TRAV1-2A0A0B4J238 MIR569-201ENST00000385228 96 ntBASIC-3.35□□□□□ -2.95
TRAV1-2A0A0B4J238 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.35□□□□□ -2.95
TRAV1-2A0A0B4J238 MTATP8P1-201ENST00000467115 207 ntBASIC-3.35□□□□□ -2.95
TRAV1-2A0A0B4J238 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.36□□□□□ -2.95
TRAV1-2A0A0B4J238 MIR3171-201ENST00000584270 74 ntBASIC-3.36□□□□□ -2.95
TRAV1-2A0A0B4J238 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.38□□□□□ -2.95
TRAV1-2A0A0B4J238 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-3.38□□□□□ -2.95
TRAV1-2A0A0B4J238 RNU6-554P-201ENST00000410466 106 ntBASIC-3.38□□□□□ -2.95
TRAV1-2A0A0B4J238 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.38□□□□□ -2.95
TRAV1-2A0A0B4J238 RNU6-755P-201ENST00000364400 103 ntBASIC-3.39□□□□□ -2.95
TRAV1-2A0A0B4J238 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.39□□□□□ -2.95
TRAV1-2A0A0B4J238 RNU6-659P-201ENST00000516454 104 ntBASIC-3.39□□□□□ -2.95
TRAV1-2A0A0B4J238 MIR3908-201ENST00000579798 126 ntBASIC-3.39□□□□□ -2.95
TRAV1-2A0A0B4J238 SNORD116-18-201ENST00000383961 92 ntBASIC-3.4□□□□□ -2.95
TRAV1-2A0A0B4J238 MIR3128-201ENST00000581957 66 ntBASIC-3.4□□□□□ -2.95
TRAV1-2A0A0B4J238 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 Y_RNA.202-201ENST00000364083 110 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-987P-201ENST00000384759 104 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR590-201ENST00000385008 97 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-789P-201ENST00000517105 102 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 AC020661.2-201ENST00000560114 134 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 U6atac.1-201ENST00000616025 117 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR1297-201ENST00000637311 77 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR3914-2-201ENST00000637339 95 ntBASIC-3.41□□□□□ -2.96
TRAV1-2A0A0B4J238 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 RNY4P10-201ENST00000365571 96 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 SNORD45A-201ENST00000384512 84 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 SNORD33.1-201ENST00000516213 88 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR7110-201ENST00000612638 86 ntBASIC-3.42□□□□□ -2.96
TRAV1-2A0A0B4J238 SNORA63.4-201ENST00000362763 126 ntBASIC-3.43□□□□□ -2.96
TRAV1-2A0A0B4J238 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.43□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.43□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR1254-1-201ENST00000408257 97 ntBASIC-3.43□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR548F4-201ENST00000408515 105 ntBASIC-3.43□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-394P-201ENST00000410735 107 ntBASIC-3.43□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU7-107P-201ENST00000459121 61 ntBASIC-3.43□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-810P-201ENST00000364001 107 ntBASIC-3.44□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-590P-201ENST00000365039 107 ntBASIC-3.44□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.44□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.44□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-176P-201ENST00000517196 105 ntBASIC-3.44□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR4426-201ENST00000640330 63 ntBASIC-3.44□□□□□ -2.96
TRAV1-2A0A0B4J238 MTND4LP9-201ENST00000427694 174 ntBASIC-3.45□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-345P-201ENST00000517001 107 ntBASIC-3.45□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR4484-201ENST00000582855 83 ntBASIC-3.45□□□□□ -2.96
TRAV1-2A0A0B4J238 Y_RNA.219-201ENST00000364232 113 ntBASIC-3.46□□□□□ -2.96
TRAV1-2A0A0B4J238 MIR4668-201ENST00000582284 70 ntBASIC-3.46□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU6-300P-201ENST00000459080 104 ntBASIC-3.47□□□□□ -2.96
TRAV1-2A0A0B4J238 RNU7-120P-201ENST00000459334 63 ntBASIC-3.47□□□□□ -2.96
TRAV1-2A0A0B4J238 AP001318.4-201ENST00000616637 121 ntBASIC-3.47□□□□□ -2.96
TRAV1-2A0A0B4J238 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.48□□□□□ -2.97
TRAV1-2A0A0B4J238 MT-TD-201ENST00000387419 68 ntBASIC-3.48□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.48□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.49□□□□□ -2.97
TRAV1-2A0A0B4J238 SNORA20.1-201ENST00000364790 130 ntBASIC-3.49□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.49□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.49□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-92P-201ENST00000605893 104 ntBASIC-3.49□□□□□ -2.97
TRAV1-2A0A0B4J238 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.49□□□□□ -2.97
TRAV1-2A0A0B4J238 U6.95-201ENST00000636931 70 ntBASIC-3.49□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.5□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-497P-201ENST00000365316 104 ntBASIC-3.5□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.5□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.5□□□□□ -2.97
TRAV1-2A0A0B4J238 AC026407.1-201ENST00000518369 204 ntBASIC-3.5□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.5□□□□□ -2.97
TRAV1-2A0A0B4J238 SNORD45.2-201ENST00000363552 72 ntBASIC-3.51□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.51□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-109P-201ENST00000516364 107 ntBASIC-3.51□□□□□ -2.97
TRAV1-2A0A0B4J238 RNU6-184P-201ENST00000516514 107 ntBASIC-3.51□□□□□ -2.97
TRAV1-2A0A0B4J238 SNORD114-13-201ENST00000364377 74 ntBASIC-3.52□□□□□ -2.97
TRAV1-2A0A0B4J238 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.52□□□□□ -2.97
TRAV1-2A0A0B4J238 SNORD116-24-201ENST00000384549 92 ntBASIC-3.52□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms