Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 U2.18-201ENST00000622185 84 ntBASIC-1.57□□□□□ -2.66
USH1CQ9Y6N9 RNU6-681P-201ENST00000364012 104 ntBASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 MIR1207-201ENST00000408249 87 ntBASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 RNU7-200P-201ENST00000516105 62 ntBASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 RNU7-174P-201ENST00000516248 59 ntBASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 RNU6-659P-201ENST00000516454 104 ntBASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 RNU6-971P-201ENST00000516920 106 ntBASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
USH1CQ9Y6N9 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.59□□□□□ -2.66
USH1CQ9Y6N9 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.59□□□□□ -2.66
USH1CQ9Y6N9 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.59□□□□□ -2.66
USH1CQ9Y6N9 SNORD115-31-201ENST00000365318 82 ntBASIC-1.59□□□□□ -2.66
USH1CQ9Y6N9 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.59□□□□□ -2.66
USH1CQ9Y6N9 RNA5SP405-201ENST00000363059 114 ntBASIC-1.6□□□□□ -2.67
USH1CQ9Y6N9 RNU6-587P-201ENST00000391282 106 ntBASIC-1.6□□□□□ -2.67
USH1CQ9Y6N9 RNU7-61P-201ENST00000515897 61 ntBASIC-1.6□□□□□ -2.67
USH1CQ9Y6N9 AC013734.1-201ENST00000619329 111 ntBASIC-1.6□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 RNU6-645P-201ENST00000364649 106 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 RNU6-880P-201ENST00000384526 107 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 SNORD77.2-201ENST00000391045 68 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 MIR548W-201ENST00000581970 74 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 MIR3170-201ENST00000582699 77 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 U4.4-201ENST00000620626 117 ntBASIC-1.61□□□□□ -2.67
USH1CQ9Y6N9 RNU6-766P-201ENST00000362478 107 ntBASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 RNU6-182P-201ENST00000516970 105 ntBASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 AC005520.4-201ENST00000604337 90 ntBASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.62□□□□□ -2.67
USH1CQ9Y6N9 MIR590-201ENST00000385008 97 ntBASIC-1.63□□□□□ -2.67
USH1CQ9Y6N9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
USH1CQ9Y6N9 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.63□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.63□□□□□ -2.67
USH1CQ9Y6N9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.63□□□□□ -2.67
USH1CQ9Y6N9 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.63□□□□□ -2.67
USH1CQ9Y6N9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.63□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.64□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.64□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.64□□□□□ -2.67
USH1CQ9Y6N9 RNU6-118P-201ENST00000516552 102 ntBASIC-1.64□□□□□ -2.67
USH1CQ9Y6N9 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.64□□□□□ -2.67
USH1CQ9Y6N9 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.65□□□□□ -2.67
USH1CQ9Y6N9 MIR3139-201ENST00000579145 76 ntBASIC-1.65□□□□□ -2.67
USH1CQ9Y6N9 U7.3-201ENST00000616123 62 ntBASIC-1.65□□□□□ -2.67
USH1CQ9Y6N9 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.66□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.66□□□□□ -2.68
USH1CQ9Y6N9 SNORD116-21-201ENST00000384507 92 ntBASIC-1.66□□□□□ -2.68
USH1CQ9Y6N9 MIR519C-201ENST00000385053 87 ntBASIC-1.66□□□□□ -2.68
USH1CQ9Y6N9 MTATP8P2-201ENST00000435212 202 ntBASIC-1.66□□□□□ -2.68
USH1CQ9Y6N9 snoU13.10-201ENST00000459301 103 ntBASIC-1.66□□□□□ -2.68
USH1CQ9Y6N9 MIR23C-201ENST00000579846 100 ntBASIC-1.66□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.67□□□□□ -2.68
USH1CQ9Y6N9 RNU6-694P-201ENST00000364071 147 ntBASIC-1.67□□□□□ -2.68
USH1CQ9Y6N9 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.67□□□□□ -2.68
USH1CQ9Y6N9 RNY1P5-201ENST00000383890 115 ntBASIC-1.67□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.67□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.68□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.68□□□□□ -2.68
USH1CQ9Y6N9 RNU6-624P-201ENST00000363411 107 ntBASIC-1.68□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.68□□□□□ -2.68
USH1CQ9Y6N9 RNU6-982P-201ENST00000516216 102 ntBASIC-1.68□□□□□ -2.68
USH1CQ9Y6N9 RNU6-162P-201ENST00000516228 103 ntBASIC-1.68□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 RNU6-330P-201ENST00000363015 107 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 MIR548C-201ENST00000384815 97 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 RNU6-346P-201ENST00000516288 111 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.69□□□□□ -2.68
USH1CQ9Y6N9 RNU6-194P-201ENST00000363862 105 ntBASIC-1.7□□□□□ -2.68
USH1CQ9Y6N9 MIR1302-5-201ENST00000408164 150 ntBASIC-1.71□□□□□ -2.68
USH1CQ9Y6N9 RNU6-109P-201ENST00000516364 107 ntBASIC-1.71□□□□□ -2.68
USH1CQ9Y6N9 RNU6-184P-201ENST00000516514 107 ntBASIC-1.71□□□□□ -2.68
USH1CQ9Y6N9 RNU6-633P-201ENST00000362612 103 ntBASIC-1.72□□□□□ -2.68
USH1CQ9Y6N9 RNU6-698P-201ENST00000363523 107 ntBASIC-1.72□□□□□ -2.68
USH1CQ9Y6N9 RNU6-34P-201ENST00000364874 107 ntBASIC-1.72□□□□□ -2.68
USH1CQ9Y6N9 MIR581-201ENST00000384895 96 ntBASIC-1.72□□□□□ -2.68
USH1CQ9Y6N9 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.72□□□□□ -2.68
USH1CQ9Y6N9 MIR548V-201ENST00000584165 80 ntBASIC-1.72□□□□□ -2.68
USH1CQ9Y6N9 U6.97-201ENST00000636904 101 ntBASIC-1.72□□□□□ -2.68
USH1CQ9Y6N9 SNORD1B-201ENST00000363091 84 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 SNORD116-14-201ENST00000383894 92 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 SNORD116-17-201ENST00000383929 92 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 RNU6-106P-201ENST00000384405 107 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 SNORD116-15-201ENST00000384445 92 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 SNORD116-19-201ENST00000384729 92 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 SNORA41B-201ENST00000384785 128 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 SNORD113-2-201ENST00000391082 72 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 RNU6-554P-201ENST00000410466 106 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 RNY3P8-201ENST00000411366 126 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 RNU6-255P-201ENST00000516957 105 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 MIR4748-201ENST00000578076 82 ntBASIC-1.73□□□□□ -2.69
USH1CQ9Y6N9 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 221.3 ms