Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.78□□□□□ -2.53
Q9N2K0 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.78□□□□□ -2.53
Q9N2K0 AP002795.1-201ENST00000534879 84 ntBASIC-0.78□□□□□ -2.53
Q9N2K0 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.79□□□□□ -2.54
Q9N2K0 MIR587-201ENST00000384845 96 ntBASIC-0.79□□□□□ -2.54
Q9N2K0 RNU6-604P-201ENST00000390917 100 ntBASIC-0.79□□□□□ -2.54
Q9N2K0 SCARNA18B-201ENST00000458806 135 ntBASIC-0.79□□□□□ -2.54
Q9N2K0 snoU83B.1-201ENST00000517136 88 ntBASIC-0.79□□□□□ -2.54
Q9N2K0 U7.5-201ENST00000517224 61 ntBASIC-0.79□□□□□ -2.54
Q9N2K0 RNU6-924P-201ENST00000362926 108 ntBASIC-0.8□□□□□ -2.54
Q9N2K0 RNU6-246P-201ENST00000384702 107 ntBASIC-0.8□□□□□ -2.54
Q9N2K0 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.8□□□□□ -2.54
Q9N2K0 RNU7-154P-201ENST00000516194 62 ntBASIC-0.8□□□□□ -2.54
Q9N2K0 RNU6-557P-201ENST00000516842 110 ntBASIC-0.8□□□□□ -2.54
Q9N2K0 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.8□□□□□ -2.54
Q9N2K0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.8□□□□□ -2.54
Q9N2K0 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.81□□□□□ -2.54
Q9N2K0 RNU6-497P-201ENST00000365316 104 ntBASIC-0.81□□□□□ -2.54
Q9N2K0 SNORA8.1-201ENST00000384250 140 ntBASIC-0.81□□□□□ -2.54
Q9N2K0 SNORA26.4-201ENST00000391188 123 ntBASIC-0.81□□□□□ -2.54
Q9N2K0 RPL35AP4-201ENST00000412007 102 ntBASIC-0.81□□□□□ -2.54
Q9N2K0 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.81□□□□□ -2.54
Q9N2K0 MIR664A-201ENST00000626086 82 ntBASIC-0.81□□□□□ -2.54
Q9N2K0 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.82□□□□□ -2.54
Q9N2K0 RNU6-44P-201ENST00000384045 107 ntBASIC-0.82□□□□□ -2.54
Q9N2K0 MIR507-201ENST00000385234 94 ntBASIC-0.82□□□□□ -2.54
Q9N2K0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.82□□□□□ -2.54
Q9N2K0 AL021921.1-201ENST00000442774 93 ntBASIC-0.82□□□□□ -2.54
Q9N2K0 SNORD45.1-201ENST00000363181 77 ntBASIC-0.83□□□□□ -2.54
Q9N2K0 SNORD19-201ENST00000391191 68 ntBASIC-0.83□□□□□ -2.54
Q9N2K0 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.83□□□□□ -2.54
Q9N2K0 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 RNU6-675P-201ENST00000384236 104 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 MIR8485-201ENST00000401372 91 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 SNX3P1X-201ENST00000414887 175 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 RNU6-732P-201ENST00000516033 103 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 RNU6-844P-201ENST00000517175 102 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 MIR3675-201ENST00000583661 73 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 MIR548V-201ENST00000584165 80 ntBASIC-0.84□□□□□ -2.54
Q9N2K0 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.85□□□□□ -2.55
Q9N2K0 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.85□□□□□ -2.55
Q9N2K0 SNORD115-33-201ENST00000363723 82 ntBASIC-0.86□□□□□ -2.55
Q9N2K0 RNU6-49P-201ENST00000384256 107 ntBASIC-0.86□□□□□ -2.55
Q9N2K0 RNU6-168P-201ENST00000516189 101 ntBASIC-0.86□□□□□ -2.55
Q9N2K0 RNU6-303P-201ENST00000517091 106 ntBASIC-0.86□□□□□ -2.55
Q9N2K0 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.86□□□□□ -2.55
Q9N2K0 MIR378F-201ENST00000578143 78 ntBASIC-0.86□□□□□ -2.55
Q9N2K0 MIR4324-201ENST00000584846 72 ntBASIC-0.86□□□□□ -2.55
Q9N2K0 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 RNA5SP26-201ENST00000362406 119 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 RNU6-686P-201ENST00000364839 107 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 RNU6-129P-201ENST00000391022 107 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 MIR548Q-201ENST00000408404 100 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 MIR1468-201ENST00000410600 86 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 MIR6738-201ENST00000619620 64 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 MIR4320-201ENST00000636981 65 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 AC006160.2-201ENST00000637708 154 ntBASIC-0.87□□□□□ -2.55
Q9N2K0 RNU6-458P-201ENST00000384179 107 ntBASIC-0.88□□□□□ -2.55
Q9N2K0 AL353691.2-201ENST00000443795 59 ntBASIC-0.88□□□□□ -2.55
Q9N2K0 RNU7-174P-201ENST00000516248 59 ntBASIC-0.88□□□□□ -2.55
Q9N2K0 U6.58-201ENST00000613107 107 ntBASIC-0.88□□□□□ -2.55
Q9N2K0 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 RNU6-10P-201ENST00000384036 107 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 MIR630-201ENST00000384957 97 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 RNU6-380P-201ENST00000410207 107 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 AC074348.1-201ENST00000426503 132 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 RNU6-807P-201ENST00000516805 107 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 U4.4-201ENST00000620626 117 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 MIR5683-201ENST00000636514 76 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 MIR198-201ENST00000637333 62 ntBASIC-0.89□□□□□ -2.55
Q9N2K0 SNORD45A-201ENST00000384512 84 ntBASIC-0.9□□□□□ -2.55
Q9N2K0 MIR527-201ENST00000385244 85 ntBASIC-0.9□□□□□ -2.55
Q9N2K0 MIR6818-201ENST00000621576 65 ntBASIC-0.9□□□□□ -2.55
Q9N2K0 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.91□□□□□ -2.56
Q9N2K0 U2.18-201ENST00000622185 84 ntBASIC-0.91□□□□□ -2.56
Q9N2K0 MIR6874-201ENST00000635894 71 ntBASIC-0.91□□□□□ -2.56
Q9N2K0 RNU6-598P-201ENST00000364017 105 ntBASIC-0.92□□□□□ -2.56
Q9N2K0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
Q9N2K0 RNA5SP89-201ENST00000410300 108 ntBASIC-0.92□□□□□ -2.56
Q9N2K0 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.93□□□□□ -2.56
Q9N2K0 RNU6-587P-201ENST00000391282 106 ntBASIC-0.93□□□□□ -2.56
Q9N2K0 MIR889-201ENST00000401280 79 ntBASIC-0.93□□□□□ -2.56
Q9N2K0 RNY4P30-201ENST00000410216 95 ntBASIC-0.93□□□□□ -2.56
Q9N2K0 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.93□□□□□ -2.56
Q9N2K0 IGLL4P-201ENST00000614590 133 ntBASIC-0.93□□□□□ -2.56
Q9N2K0 MIR1297-201ENST00000637311 77 ntBASIC-0.93□□□□□ -2.56
Q9N2K0 RNY1P1-201ENST00000364372 112 ntBASIC-0.94□□□□□ -2.56
Q9N2K0 MIR601-201ENST00000385256 79 ntBASIC-0.94□□□□□ -2.56
Q9N2K0 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.94□□□□□ -2.56
Q9N2K0 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 SNORD113.1-201ENST00000363280 73 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 RNU6-24P-201ENST00000384440 107 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms