Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MIR3612-201ENST00000579753 87 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR4636-201ENST00000582271 80 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 VTRNA2-1-201ENST00000602301 127 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 AL353765.1-201ENST00000605514 183 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR7106-201ENST00000612419 65 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 uc_338.32-201ENST00000615087 172 ntBASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
KRTAP4-4Q9BYR3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 AC090625.1-201ENST00000357130 210 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 RNA5SP99-201ENST00000364020 114 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-112P-201ENST00000364401 164 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA71.1-201ENST00000364523 117 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD114-17-201ENST00000364699 75 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA2A-201ENST00000383885 135 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 Y_RNA.543-201ENST00000384649 107 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR598-201ENST00000384868 97 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR573-201ENST00000384964 99 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR518A2-201ENST00000384966 87 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR501-201ENST00000390204 84 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR2114-201ENST00000516645 80 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6-165P-201ENST00000517170 99 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6-706P-201ENST00000517229 104 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR4325-201ENST00000583049 90 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR3616-201ENST00000584070 92 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR4263-201ENST00000584745 83 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR7851-201ENST00000610611 160 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR1246-201ENST00000636535 73 ntBASIC0.55□□□□□ -2.32
KRTAP4-4Q9BYR3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD114-15-201ENST00000364687 72 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-52P-201ENST00000384190 164 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA80D-201ENST00000384488 135 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD56B-201ENST00000384713 71 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR196B-201ENST00000384852 84 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR520E-201ENST00000384867 87 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR184-201ENST00000384962 84 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR487B-201ENST00000385021 84 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD105-201ENST00000386910 85 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6-400P-201ENST00000391173 106 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 AC006989.1-201ENST00000427212 131 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 AC108019.1-201ENST00000512540 175 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-143P-201ENST00000516296 146 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR4319-201ENST00000577285 85 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR378F-201ENST00000578143 78 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 U1.23-201ENST00000610293 146 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 AC012531.5-201ENST00000611375 151 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU1-68P-201ENST00000615382 146 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 U1.39-201ENST00000621562 146 ntBASIC0.54□□□□□ -2.32
KRTAP4-4Q9BYR3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORD56.3-201ENST00000363507 71 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6-164P-201ENST00000364604 103 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6-841P-201ENST00000383872 107 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR19B1-201ENST00000384829 87 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR1289-1-201ENST00000408836 144 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 Y_RNA.591-201ENST00000410228 104 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 RNA5SP229-201ENST00000410809 99 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 AC003989.2-201ENST00000440224 169 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 RNA5SP148-201ENST00000516527 94 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 SNORA64.4-201ENST00000516632 81 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 RNU6-579P-201ENST00000516879 102 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR5004-201ENST00000579078 107 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR4645-201ENST00000583158 77 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR3925-201ENST00000584674 77 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 AL590491.3-201ENST00000610731 82 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 MIR8070-201ENST00000616510 88 ntBASIC0.53□□□□□ -2.32
KRTAP4-4Q9BYR3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.53□□□□□ -2.33
KRTAP4-4Q9BYR3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP289-201ENST00000362332 137 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP139-201ENST00000364340 117 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 Y_RNA.365-201ENST00000365537 102 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR512-1-201ENST00000384913 84 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 Y_RNA.583-201ENST00000391033 113 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 AC104332.2-201ENST00000429959 156 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 AC087499.2-201ENST00000432861 149 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD109B-201ENST00000458961 67 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD109A-201ENST00000459128 67 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP356-201ENST00000515972 94 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 AL353997.5-201ENST00000618886 171 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.52□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR423-201ENST00000362201 94 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR148B-201ENST00000362252 99 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR934-201ENST00000401241 83 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 Z98941.1-201ENST00000407764 100 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORD75.1-201ENST00000408373 60 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 RNU4-47P-201ENST00000410876 114 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP508-201ENST00000411327 119 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 AC069271.1-201ENST00000445577 156 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 RNA5SP285-201ENST00000516619 119 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR3115-201ENST00000577915 68 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 SNORA77B-201ENST00000578179 125 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR4435-1-201ENST00000582552 80 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR4672-201ENST00000583126 81 ntBASIC0.51□□□□□ -2.33
KRTAP4-4Q9BYR3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC0.5□□□□□ -2.33
KRTAP4-4Q9BYR3 MIR18A-201ENST00000362310 71 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms