Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MIR4436A-201ENST00000585278 85 ntBASIC-0.63□□□□□ -2.51
CCDC28BQ9BUN5 MIR1245B-201ENST00000636115 69 ntBASIC-0.63□□□□□ -2.51
CCDC28BQ9BUN5 MIR494-201ENST00000349529 81 ntBASIC-0.64□□□□□ -2.51
CCDC28BQ9BUN5 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.64□□□□□ -2.51
CCDC28BQ9BUN5 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.64□□□□□ -2.51
CCDC28BQ9BUN5 HAR1A.1-201ENST00000459583 118 ntBASIC-0.64□□□□□ -2.51
CCDC28BQ9BUN5 RNU6-518P-201ENST00000516056 96 ntBASIC-0.64□□□□□ -2.51
CCDC28BQ9BUN5 SNORD45.1-201ENST00000363181 77 ntBASIC-0.65□□□□□ -2.51
CCDC28BQ9BUN5 MIR519A2-201ENST00000384990 87 ntBASIC-0.65□□□□□ -2.51
CCDC28BQ9BUN5 RNU6-721P-201ENST00000410155 105 ntBASIC-0.65□□□□□ -2.51
CCDC28BQ9BUN5 AL445584.3-201ENST00000617173 78 ntBASIC-0.65□□□□□ -2.51
CCDC28BQ9BUN5 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 MT-TQ-201ENST00000387372 72 ntBASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-604P-201ENST00000390917 100 ntBASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 MIR4484-201ENST00000582855 83 ntBASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 MIR8053-201ENST00000613344 75 ntBASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 U2.7-201ENST00000619197 100 ntBASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 MIR6888-201ENST00000621977 67 ntBASIC-0.66□□□□□ -2.52
CCDC28BQ9BUN5 AP000533.3-201ENST00000447704 118 ntBASIC-0.67□□□□□ -2.52
CCDC28BQ9BUN5 SNORD18.2-201ENST00000459604 70 ntBASIC-0.67□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-881P-201ENST00000516813 102 ntBASIC-0.67□□□□□ -2.52
CCDC28BQ9BUN5 RNA5SP170-201ENST00000517150 101 ntBASIC-0.67□□□□□ -2.52
CCDC28BQ9BUN5 MIR4666B-201ENST00000578142 81 ntBASIC-0.67□□□□□ -2.52
CCDC28BQ9BUN5 MIR4712-201ENST00000583750 82 ntBASIC-0.67□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-924P-201ENST00000362926 108 ntBASIC-0.68□□□□□ -2.52
CCDC28BQ9BUN5 MIR124-2-201ENST00000385081 109 ntBASIC-0.68□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.69□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.7□□□□□ -2.52
CCDC28BQ9BUN5 MTND4LP1-201ENST00000446263 157 ntBASIC-0.7□□□□□ -2.52
CCDC28BQ9BUN5 MIR517B-201ENST00000385102 67 ntBASIC-0.71□□□□□ -2.52
CCDC28BQ9BUN5 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.71□□□□□ -2.52
CCDC28BQ9BUN5 MIR548AX-201ENST00000580117 73 ntBASIC-0.71□□□□□ -2.52
CCDC28BQ9BUN5 SNORD115-22-201ENST00000364456 82 ntBASIC-0.72□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.72□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-982P-201ENST00000516216 102 ntBASIC-0.72□□□□□ -2.52
CCDC28BQ9BUN5 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.72□□□□□ -2.52
CCDC28BQ9BUN5 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.73□□□□□ -2.53
CCDC28BQ9BUN5 MIR548C-201ENST00000384815 97 ntBASIC-0.74□□□□□ -2.53
CCDC28BQ9BUN5 SCARNA18B-201ENST00000458806 135 ntBASIC-0.74□□□□□ -2.53
CCDC28BQ9BUN5 RNU7-174P-201ENST00000516248 59 ntBASIC-0.74□□□□□ -2.53
CCDC28BQ9BUN5 AC062037.1-201ENST00000605302 128 ntBASIC-0.74□□□□□ -2.53
CCDC28BQ9BUN5 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.75□□□□□ -2.53
CCDC28BQ9BUN5 RNA5SP67-201ENST00000516422 131 ntBASIC-0.75□□□□□ -2.53
CCDC28BQ9BUN5 SNORD113.1-201ENST00000363280 73 ntBASIC-0.76□□□□□ -2.53
CCDC28BQ9BUN5 RNA5SP215-201ENST00000363440 122 ntBASIC-0.76□□□□□ -2.53
CCDC28BQ9BUN5 RNU6-668P-201ENST00000364180 107 ntBASIC-0.77□□□□□ -2.53
CCDC28BQ9BUN5 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.77□□□□□ -2.53
CCDC28BQ9BUN5 RNU6-787P-201ENST00000384032 107 ntBASIC-0.77□□□□□ -2.53
CCDC28BQ9BUN5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.77□□□□□ -2.53
CCDC28BQ9BUN5 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.78□□□□□ -2.53
CCDC28BQ9BUN5 RNU6-698P-201ENST00000363523 107 ntBASIC-0.78□□□□□ -2.53
CCDC28BQ9BUN5 RNU6-34P-201ENST00000364874 107 ntBASIC-0.78□□□□□ -2.53
CCDC28BQ9BUN5 RNU6-70P-201ENST00000516438 60 ntBASIC-0.78□□□□□ -2.53
CCDC28BQ9BUN5 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.78□□□□□ -2.53
CCDC28BQ9BUN5 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.79□□□□□ -2.54
CCDC28BQ9BUN5 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.79□□□□□ -2.54
CCDC28BQ9BUN5 SNORD114-17-201ENST00000364699 75 ntBASIC-0.79□□□□□ -2.54
CCDC28BQ9BUN5 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.79□□□□□ -2.54
CCDC28BQ9BUN5 MIR664A-201ENST00000626086 82 ntBASIC-0.79□□□□□ -2.54
CCDC28BQ9BUN5 MIR3202-2-201ENST00000635980 79 ntBASIC-0.79□□□□□ -2.54
CCDC28BQ9BUN5 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.8□□□□□ -2.54
CCDC28BQ9BUN5 SNORD73B-201ENST00000364394 72 ntBASIC-0.8□□□□□ -2.54
CCDC28BQ9BUN5 SNORD45A-201ENST00000384512 84 ntBASIC-0.8□□□□□ -2.54
CCDC28BQ9BUN5 MIR147A-201ENST00000385079 72 ntBASIC-0.8□□□□□ -2.54
CCDC28BQ9BUN5 MIR196A1-201ENST00000388006 70 ntBASIC-0.8□□□□□ -2.54
CCDC28BQ9BUN5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.8□□□□□ -2.54
CCDC28BQ9BUN5 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.81□□□□□ -2.54
CCDC28BQ9BUN5 SNORD115-33-201ENST00000363723 82 ntBASIC-0.81□□□□□ -2.54
CCDC28BQ9BUN5 MIR154-201ENST00000385243 84 ntBASIC-0.81□□□□□ -2.54
CCDC28BQ9BUN5 SNORA26.4-201ENST00000391188 123 ntBASIC-0.81□□□□□ -2.54
CCDC28BQ9BUN5 RNU6-587P-201ENST00000391282 106 ntBASIC-0.81□□□□□ -2.54
CCDC28BQ9BUN5 MIR429-201ENST00000362106 83 ntBASIC-0.82□□□□□ -2.54
CCDC28BQ9BUN5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
CCDC28BQ9BUN5 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 RNA5SP173-201ENST00000364857 136 ntBASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 RNU6-246P-201ENST00000384702 107 ntBASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 SNORA26.2-201ENST00000390922 122 ntBASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 RNY4P29-201ENST00000410801 97 ntBASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 MIR548AG1-201ENST00000579932 66 ntBASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 MIR548V-201ENST00000584165 80 ntBASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.83□□□□□ -2.54
CCDC28BQ9BUN5 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.84□□□□□ -2.54
CCDC28BQ9BUN5 U7.4-201ENST00000614961 63 ntBASIC-0.84□□□□□ -2.54
CCDC28BQ9BUN5 SNORD114-25-201ENST00000363742 72 ntBASIC-0.85□□□□□ -2.55
CCDC28BQ9BUN5 RNU6-431P-201ENST00000383874 107 ntBASIC-0.85□□□□□ -2.55
CCDC28BQ9BUN5 RNU6-895P-201ENST00000384125 103 ntBASIC-0.85□□□□□ -2.55
CCDC28BQ9BUN5 RNU6-411P-201ENST00000384451 107 ntBASIC-0.85□□□□□ -2.55
CCDC28BQ9BUN5 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.85□□□□□ -2.55
CCDC28BQ9BUN5 MIR3134-201ENST00000579433 74 ntBASIC-0.85□□□□□ -2.55
CCDC28BQ9BUN5 U4.4-201ENST00000620626 117 ntBASIC-0.85□□□□□ -2.55
CCDC28BQ9BUN5 MIR409-201ENST00000362237 79 ntBASIC-0.86□□□□□ -2.55
CCDC28BQ9BUN5 SNORD64-201ENST00000386683 67 ntBASIC-0.86□□□□□ -2.55
CCDC28BQ9BUN5 SNORD113-2-201ENST00000391082 72 ntBASIC-0.86□□□□□ -2.55
CCDC28BQ9BUN5 MIR1302-4-201ENST00000408701 150 ntBASIC-0.86□□□□□ -2.55
CCDC28BQ9BUN5 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.86□□□□□ -2.55
CCDC28BQ9BUN5 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.87□□□□□ -2.55
CCDC28BQ9BUN5 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.87□□□□□ -2.55
CCDC28BQ9BUN5 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.87□□□□□ -2.55
CCDC28BQ9BUN5 RNU6-458P-201ENST00000384179 107 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms