Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 RNU6-820P-201ENST00000384273 107 ntBASIC-0.58□□□□□ -2.5
NUP88Q99567 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 SNORD114-14-201ENST00000362723 75 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 RNU6-787P-201ENST00000384032 107 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 MIR519A2-201ENST00000384990 87 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 MIR518B-201ENST00000385127 83 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 SNORD22.1-201ENST00000516331 125 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 AL445584.3-201ENST00000617173 78 ntBASIC-0.59□□□□□ -2.5
NUP88Q99567 SNORA13-201ENST00000458790 133 ntBASIC-0.6□□□□□ -2.51
NUP88Q99567 RNY1P9-201ENST00000532431 109 ntBASIC-0.6□□□□□ -2.51
NUP88Q99567 MT-TQ-201ENST00000387372 72 ntBASIC-0.61□□□□□ -2.51
NUP88Q99567 SNORA3B-201ENST00000391305 131 ntBASIC-0.61□□□□□ -2.51
NUP88Q99567 U2.7-201ENST00000619197 100 ntBASIC-0.61□□□□□ -2.51
NUP88Q99567 SNORD45.1-201ENST00000363181 77 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 RNU6-645P-201ENST00000364649 106 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 SNORD74.6-201ENST00000364796 70 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 RNU6-982P-201ENST00000516216 102 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 MIR664A-201ENST00000626086 82 ntBASIC-0.62□□□□□ -2.51
NUP88Q99567 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 RNU6-604P-201ENST00000390917 100 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 AC021146.6-201ENST00000514659 117 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-1-201ENST00000578940 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-2-201ENST00000579107 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-3-201ENST00000579566 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR4712-201ENST00000583750 82 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 AC062037.1-201ENST00000605302 128 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR3179-4-201ENST00000617599 84 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 MIR1245B-201ENST00000636115 69 ntBASIC-0.63□□□□□ -2.51
NUP88Q99567 SCARNA18B-201ENST00000458806 135 ntBASIC-0.64□□□□□ -2.51
NUP88Q99567 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
NUP88Q99567 RNU6-518P-201ENST00000516056 96 ntBASIC-0.65□□□□□ -2.51
NUP88Q99567 RNU7-154P-201ENST00000516194 62 ntBASIC-0.65□□□□□ -2.51
NUP88Q99567 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.65□□□□□ -2.51
NUP88Q99567 SNORD115-22-201ENST00000364456 82 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 MIR548C-201ENST00000384815 97 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 MIR124-2-201ENST00000385081 109 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 AL021921.1-201ENST00000442774 93 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.66□□□□□ -2.52
NUP88Q99567 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.67□□□□□ -2.52
NUP88Q99567 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
NUP88Q99567 SNX3P1X-201ENST00000414887 175 ntBASIC-0.67□□□□□ -2.52
NUP88Q99567 MIR4666B-201ENST00000578142 81 ntBASIC-0.67□□□□□ -2.52
NUP88Q99567 SNORD73B-201ENST00000364394 72 ntBASIC-0.68□□□□□ -2.52
NUP88Q99567 AP000533.3-201ENST00000447704 118 ntBASIC-0.68□□□□□ -2.52
NUP88Q99567 MIR3681-201ENST00000580089 72 ntBASIC-0.68□□□□□ -2.52
NUP88Q99567 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 SNORD18.2-201ENST00000459604 70 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 RNU7-174P-201ENST00000516248 59 ntBASIC-0.69□□□□□ -2.52
NUP88Q99567 MIR517B-201ENST00000385102 67 ntBASIC-0.7□□□□□ -2.52
NUP88Q99567 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.7□□□□□ -2.52
NUP88Q99567 RNU6-246P-201ENST00000384702 107 ntBASIC-0.71□□□□□ -2.52
NUP88Q99567 MIR8053-201ENST00000613344 75 ntBASIC-0.71□□□□□ -2.52
NUP88Q99567 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.72□□□□□ -2.52
NUP88Q99567 SNORA26.2-201ENST00000390922 122 ntBASIC-0.72□□□□□ -2.52
NUP88Q99567 MIR1468-201ENST00000410600 86 ntBASIC-0.72□□□□□ -2.52
NUP88Q99567 SNORD45A-201ENST00000384512 84 ntBASIC-0.73□□□□□ -2.53
NUP88Q99567 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.73□□□□□ -2.53
NUP88Q99567 RNU6-924P-201ENST00000362926 108 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 U4.4-201ENST00000620626 117 ntBASIC-0.74□□□□□ -2.53
NUP88Q99567 SNORD113.1-201ENST00000363280 73 ntBASIC-0.75□□□□□ -2.53
NUP88Q99567 RNU6-431P-201ENST00000383874 107 ntBASIC-0.75□□□□□ -2.53
NUP88Q99567 MTND4LP1-201ENST00000446263 157 ntBASIC-0.75□□□□□ -2.53
NUP88Q99567 RNU6-70P-201ENST00000516438 60 ntBASIC-0.76□□□□□ -2.53
NUP88Q99567 MIR3134-201ENST00000579433 74 ntBASIC-0.76□□□□□ -2.53
NUP88Q99567 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.77□□□□□ -2.53
NUP88Q99567 RNU6-587P-201ENST00000391282 106 ntBASIC-0.77□□□□□ -2.53
NUP88Q99567 SNORD114-17-201ENST00000364699 75 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 SNORD116-24-201ENST00000384549 92 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 MIR147A-201ENST00000385079 72 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 RNY4P29-201ENST00000410801 97 ntBASIC-0.78□□□□□ -2.53
NUP88Q99567 RNU6-668P-201ENST00000364180 107 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 SNORD115-31-201ENST00000365318 82 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 MIR4723-201ENST00000585070 81 ntBASIC-0.79□□□□□ -2.54
NUP88Q99567 MIR3202-2-201ENST00000635980 79 ntBASIC-0.8□□□□□ -2.54
NUP88Q99567 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 RNA5SP173-201ENST00000364857 136 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 MIR154-201ENST00000385243 84 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 SNORD64-201ENST00000386683 67 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 AL500527.2-201ENST00000454105 95 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 RNU6-687P-201ENST00000516443 89 ntBASIC-0.81□□□□□ -2.54
NUP88Q99567 SNORD114-25-201ENST00000363742 72 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 RNU6-573P-201ENST00000383938 106 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 MIR587-201ENST00000384845 96 ntBASIC-0.82□□□□□ -2.54
NUP88Q99567 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.82□□□□□ -2.54
NUP88Q99567 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.83□□□□□ -2.54
NUP88Q99567 RNA5SP215-201ENST00000363440 122 ntBASIC-0.83□□□□□ -2.54
NUP88Q99567 RNU6-698P-201ENST00000363523 107 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 327.8 ms