Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 SNORA19-201ENST00000384737 128 ntBASIC-1.68□□□□□ -2.68
VPS35Q96QK1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.68□□□□□ -2.68
VPS35Q96QK1 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.68□□□□□ -2.68
VPS35Q96QK1 AC008267.6-201ENST00000441664 139 ntBASIC-1.68□□□□□ -2.68
VPS35Q96QK1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.68□□□□□ -2.68
VPS35Q96QK1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.69□□□□□ -2.68
VPS35Q96QK1 RNU6-624P-201ENST00000363411 107 ntBASIC-1.69□□□□□ -2.68
VPS35Q96QK1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.69□□□□□ -2.68
VPS35Q96QK1 MIR520D-201ENST00000385002 87 ntBASIC-1.69□□□□□ -2.68
VPS35Q96QK1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.69□□□□□ -2.68
VPS35Q96QK1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.69□□□□□ -2.68
VPS35Q96QK1 RNU6-330P-201ENST00000363015 107 ntBASIC-1.7□□□□□ -2.68
VPS35Q96QK1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.7□□□□□ -2.68
VPS35Q96QK1 RNU6-959P-201ENST00000384671 107 ntBASIC-1.7□□□□□ -2.68
VPS35Q96QK1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.7□□□□□ -2.68
VPS35Q96QK1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.7□□□□□ -2.68
VPS35Q96QK1 AC018880.2-201ENST00000414265 201 ntBASIC-1.7□□□□□ -2.68
VPS35Q96QK1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.7□□□□□ -2.68
VPS35Q96QK1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.71□□□□□ -2.68
VPS35Q96QK1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.71□□□□□ -2.68
VPS35Q96QK1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.71□□□□□ -2.68
VPS35Q96QK1 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.71□□□□□ -2.68
VPS35Q96QK1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.71□□□□□ -2.68
VPS35Q96QK1 MIR548C-201ENST00000384815 97 ntBASIC-1.71□□□□□ -2.68
VPS35Q96QK1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.71□□□□□ -2.68
VPS35Q96QK1 RNU6-633P-201ENST00000362612 103 ntBASIC-1.72□□□□□ -2.68
VPS35Q96QK1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.72□□□□□ -2.68
VPS35Q96QK1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.72□□□□□ -2.68
VPS35Q96QK1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.72□□□□□ -2.68
VPS35Q96QK1 U4.4-201ENST00000620626 117 ntBASIC-1.72□□□□□ -2.68
VPS35Q96QK1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.73□□□□□ -2.69
VPS35Q96QK1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.73□□□□□ -2.69
VPS35Q96QK1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.73□□□□□ -2.69
VPS35Q96QK1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.74□□□□□ -2.69
VPS35Q96QK1 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.74□□□□□ -2.69
VPS35Q96QK1 MIR365A-201ENST00000362260 87 ntBASIC-1.75□□□□□ -2.69
VPS35Q96QK1 RNU6-982P-201ENST00000516216 102 ntBASIC-1.75□□□□□ -2.69
VPS35Q96QK1 RNU6-158P-201ENST00000517104 100 ntBASIC-1.75□□□□□ -2.69
VPS35Q96QK1 MIR3675-201ENST00000583661 73 ntBASIC-1.75□□□□□ -2.69
VPS35Q96QK1 RNU6-497P-201ENST00000365316 104 ntBASIC-1.76□□□□□ -2.69
VPS35Q96QK1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.76□□□□□ -2.69
VPS35Q96QK1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.76□□□□□ -2.69
VPS35Q96QK1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 SNORA8.1-201ENST00000384250 140 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 MIR548H1-201ENST00000408610 102 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 AC074348.1-201ENST00000426503 132 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 RNU6-557P-201ENST00000516842 110 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 MIR4668-201ENST00000582284 70 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 AL365222.1-201ENST00000614661 98 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 U4.2-201ENST00000618561 85 ntBASIC-1.77□□□□□ -2.69
VPS35Q96QK1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.78□□□□□ -2.69
VPS35Q96QK1 AC093729.1-201ENST00000513074 128 ntBASIC-1.78□□□□□ -2.69
VPS35Q96QK1 RNU6-589P-201ENST00000516485 107 ntBASIC-1.78□□□□□ -2.69
VPS35Q96QK1 RNU6-303P-201ENST00000517091 106 ntBASIC-1.78□□□□□ -2.69
VPS35Q96QK1 U2.18-201ENST00000622185 84 ntBASIC-1.78□□□□□ -2.69
VPS35Q96QK1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.79□□□□□ -2.7
VPS35Q96QK1 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.79□□□□□ -2.7
VPS35Q96QK1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.79□□□□□ -2.7
VPS35Q96QK1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.79□□□□□ -2.7
VPS35Q96QK1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.79□□□□□ -2.7
VPS35Q96QK1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.79□□□□□ -2.7
VPS35Q96QK1 MIR429-201ENST00000362106 83 ntBASIC-1.8□□□□□ -2.7
VPS35Q96QK1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.8□□□□□ -2.7
VPS35Q96QK1 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.8□□□□□ -2.7
VPS35Q96QK1 MIR4441-201ENST00000582623 100 ntBASIC-1.8□□□□□ -2.7
VPS35Q96QK1 MIR487B-201ENST00000385021 84 ntBASIC-1.81□□□□□ -2.7
VPS35Q96QK1 MIR548V-201ENST00000584165 80 ntBASIC-1.81□□□□□ -2.7
VPS35Q96QK1 MIR2052-201ENST00000636055 55 ntBASIC-1.81□□□□□ -2.7
VPS35Q96QK1 RNU6-219P-201ENST00000364728 107 ntBASIC-1.82□□□□□ -2.7
VPS35Q96QK1 MIR4723-201ENST00000585070 81 ntBASIC-1.82□□□□□ -2.7
VPS35Q96QK1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.83□□□□□ -2.7
VPS35Q96QK1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.83□□□□□ -2.7
VPS35Q96QK1 RNU6-81P-201ENST00000365608 104 ntBASIC-1.83□□□□□ -2.7
VPS35Q96QK1 MIR23C-201ENST00000579846 100 ntBASIC-1.83□□□□□ -2.7
VPS35Q96QK1 MIR3170-201ENST00000582699 77 ntBASIC-1.83□□□□□ -2.7
VPS35Q96QK1 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.84□□□□□ -2.7
VPS35Q96QK1 RNU6-686P-201ENST00000364839 107 ntBASIC-1.84□□□□□ -2.7
VPS35Q96QK1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.84□□□□□ -2.7
VPS35Q96QK1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.84□□□□□ -2.7
VPS35Q96QK1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.85□□□□□ -2.71
VPS35Q96QK1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.85□□□□□ -2.71
VPS35Q96QK1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.86□□□□□ -2.71
VPS35Q96QK1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.86□□□□□ -2.71
VPS35Q96QK1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.86□□□□□ -2.71
VPS35Q96QK1 AC120024.2-201ENST00000576526 175 ntBASIC-1.86□□□□□ -2.71
VPS35Q96QK1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 MIR630-201ENST00000384957 97 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 AL031737.1-201ENST00000450125 223 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 RNU6-267P-201ENST00000516714 103 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 MIR3668-201ENST00000582138 75 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 MIR548BB-201ENST00000626714 66 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 MIR1246-201ENST00000636535 73 ntBASIC-1.87□□□□□ -2.71
VPS35Q96QK1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.88□□□□□ -2.71
VPS35Q96QK1 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.88□□□□□ -2.71
VPS35Q96QK1 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.88□□□□□ -2.71
VPS35Q96QK1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.89□□□□□ -2.71
VPS35Q96QK1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms