Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.51□□□□□ -2.65
RAB3IPQ96QF0 RNU6-340P-201ENST00000364005 107 ntBASIC-1.52□□□□□ -2.65
RAB3IPQ96QF0 RNU6-164P-201ENST00000364604 103 ntBASIC-1.52□□□□□ -2.65
RAB3IPQ96QF0 RNU6-681P-201ENST00000364012 104 ntBASIC-1.53□□□□□ -2.65
RAB3IPQ96QF0 MIR487B-201ENST00000385021 84 ntBASIC-1.53□□□□□ -2.65
RAB3IPQ96QF0 SNORA26.4-201ENST00000391188 123 ntBASIC-1.53□□□□□ -2.65
RAB3IPQ96QF0 MTATP8P2-201ENST00000435212 202 ntBASIC-1.53□□□□□ -2.65
RAB3IPQ96QF0 SNORD63.1-201ENST00000516178 80 ntBASIC-1.53□□□□□ -2.65
RAB3IPQ96QF0 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.54□□□□□ -2.66
RAB3IPQ96QF0 SNORD77.2-201ENST00000391045 68 ntBASIC-1.54□□□□□ -2.66
RAB3IPQ96QF0 AC108019.1-201ENST00000512540 175 ntBASIC-1.54□□□□□ -2.66
RAB3IPQ96QF0 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.54□□□□□ -2.66
RAB3IPQ96QF0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
RAB3IPQ96QF0 MIR6739-201ENST00000622461 75 ntBASIC-1.54□□□□□ -2.66
RAB3IPQ96QF0 RNU6-834P-201ENST00000362367 110 ntBASIC-1.55□□□□□ -2.66
RAB3IPQ96QF0 SNORD115-33-201ENST00000363723 82 ntBASIC-1.55□□□□□ -2.66
RAB3IPQ96QF0 MIR519A2-201ENST00000384990 87 ntBASIC-1.55□□□□□ -2.66
RAB3IPQ96QF0 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.55□□□□□ -2.66
RAB3IPQ96QF0 MIR548M-201ENST00000408260 86 ntBASIC-1.55□□□□□ -2.66
RAB3IPQ96QF0 SNORD115-37-201ENST00000363768 82 ntBASIC-1.56□□□□□ -2.66
RAB3IPQ96QF0 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.56□□□□□ -2.66
RAB3IPQ96QF0 RNU6-22P-201ENST00000384355 107 ntBASIC-1.56□□□□□ -2.66
RAB3IPQ96QF0 RNU6-518P-201ENST00000516056 96 ntBASIC-1.56□□□□□ -2.66
RAB3IPQ96QF0 MIR664B-201ENST00000626756 61 ntBASIC-1.56□□□□□ -2.66
RAB3IPQ96QF0 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.57□□□□□ -2.66
RAB3IPQ96QF0 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.57□□□□□ -2.66
RAB3IPQ96QF0 RNU7-154P-201ENST00000516194 62 ntBASIC-1.57□□□□□ -2.66
RAB3IPQ96QF0 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.57□□□□□ -2.66
RAB3IPQ96QF0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
RAB3IPQ96QF0 MIR4756-201ENST00000577874 78 ntBASIC-1.58□□□□□ -2.66
RAB3IPQ96QF0 RNU6-119P-201ENST00000364882 107 ntBASIC-1.59□□□□□ -2.66
RAB3IPQ96QF0 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.59□□□□□ -2.66
RAB3IPQ96QF0 AL035461.1-201ENST00000421490 332 ntBASIC-1.59□□□□□ -2.66
RAB3IPQ96QF0 AL031737.1-201ENST00000450125 223 ntBASIC-1.59□□□□□ -2.66
RAB3IPQ96QF0 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.59□□□□□ -2.66
RAB3IPQ96QF0 MIR2052-201ENST00000636055 55 ntBASIC-1.59□□□□□ -2.66
RAB3IPQ96QF0 MIR450A1-201ENST00000362262 91 ntBASIC-1.6□□□□□ -2.67
RAB3IPQ96QF0 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.6□□□□□ -2.67
RAB3IPQ96QF0 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.6□□□□□ -2.67
RAB3IPQ96QF0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.6□□□□□ -2.67
RAB3IPQ96QF0 MIR4668-201ENST00000582284 70 ntBASIC-1.6□□□□□ -2.67
RAB3IPQ96QF0 RNU6-633P-201ENST00000362612 103 ntBASIC-1.61□□□□□ -2.67
RAB3IPQ96QF0 SNORD115-22-201ENST00000364456 82 ntBASIC-1.61□□□□□ -2.67
RAB3IPQ96QF0 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.61□□□□□ -2.67
RAB3IPQ96QF0 MIR496-201ENST00000385226 102 ntBASIC-1.62□□□□□ -2.67
RAB3IPQ96QF0 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.62□□□□□ -2.67
RAB3IPQ96QF0 AL353691.2-201ENST00000443795 59 ntBASIC-1.63□□□□□ -2.67
RAB3IPQ96QF0 RNU6-313P-201ENST00000516317 112 ntBASIC-1.63□□□□□ -2.67
RAB3IPQ96QF0 AL021921.1-201ENST00000442774 93 ntBASIC-1.64□□□□□ -2.67
RAB3IPQ96QF0 RNU6-118P-201ENST00000516552 102 ntBASIC-1.64□□□□□ -2.67
RAB3IPQ96QF0 RNU6-980P-201ENST00000516925 103 ntBASIC-1.64□□□□□ -2.67
RAB3IPQ96QF0 MIR507-201ENST00000385234 94 ntBASIC-1.65□□□□□ -2.67
RAB3IPQ96QF0 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.65□□□□□ -2.67
RAB3IPQ96QF0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.65□□□□□ -2.67
RAB3IPQ96QF0 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.66□□□□□ -2.68
RAB3IPQ96QF0 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.66□□□□□ -2.68
RAB3IPQ96QF0 RNU6-400P-201ENST00000391173 106 ntBASIC-1.66□□□□□ -2.68
RAB3IPQ96QF0 AC093729.1-201ENST00000513074 128 ntBASIC-1.66□□□□□ -2.68
RAB3IPQ96QF0 RNU6-168P-201ENST00000516189 101 ntBASIC-1.66□□□□□ -2.68
RAB3IPQ96QF0 RNY4P7-201ENST00000364600 96 ntBASIC-1.67□□□□□ -2.68
RAB3IPQ96QF0 RNU7-88P-201ENST00000458752 63 ntBASIC-1.67□□□□□ -2.68
RAB3IPQ96QF0 RNU6-656P-201ENST00000516785 107 ntBASIC-1.68□□□□□ -2.68
RAB3IPQ96QF0 SNORD116-22-201ENST00000384430 92 ntBASIC-1.69□□□□□ -2.68
RAB3IPQ96QF0 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.69□□□□□ -2.68
RAB3IPQ96QF0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
RAB3IPQ96QF0 RNA5SP405-201ENST00000363059 114 ntBASIC-1.7□□□□□ -2.68
RAB3IPQ96QF0 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.7□□□□□ -2.68
RAB3IPQ96QF0 U7.5-201ENST00000517224 61 ntBASIC-1.7□□□□□ -2.68
RAB3IPQ96QF0 MIR3139-201ENST00000579145 76 ntBASIC-1.7□□□□□ -2.68
RAB3IPQ96QF0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.7□□□□□ -2.68
RAB3IPQ96QF0 RNU6-79P-201ENST00000362511 107 ntBASIC-1.71□□□□□ -2.68
RAB3IPQ96QF0 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.71□□□□□ -2.68
RAB3IPQ96QF0 AC090616.4-201ENST00000448026 115 ntBASIC-1.71□□□□□ -2.68
RAB3IPQ96QF0 SNORA40.13-201ENST00000516379 120 ntBASIC-1.71□□□□□ -2.68
RAB3IPQ96QF0 AP002795.1-201ENST00000534879 84 ntBASIC-1.71□□□□□ -2.68
RAB3IPQ96QF0 AP001318.4-201ENST00000616637 121 ntBASIC-1.71□□□□□ -2.68
RAB3IPQ96QF0 MALAT1.1-201ENST00000618249 95 ntBASIC-1.71□□□□□ -2.68
RAB3IPQ96QF0 RNU6-624P-201ENST00000363411 107 ntBASIC-1.72□□□□□ -2.68
RAB3IPQ96QF0 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.72□□□□□ -2.68
RAB3IPQ96QF0 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.72□□□□□ -2.68
RAB3IPQ96QF0 RNY4P18-201ENST00000391107 89 ntBASIC-1.72□□□□□ -2.68
RAB3IPQ96QF0 MIR548AG1-201ENST00000579932 66 ntBASIC-1.72□□□□□ -2.68
RAB3IPQ96QF0 MIR4490-201ENST00000582647 84 ntBASIC-1.72□□□□□ -2.68
RAB3IPQ96QF0 MIR548C-201ENST00000384815 97 ntBASIC-1.73□□□□□ -2.69
RAB3IPQ96QF0 RNU6-402P-201ENST00000410678 103 ntBASIC-1.73□□□□□ -2.69
RAB3IPQ96QF0 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.74□□□□□ -2.69
RAB3IPQ96QF0 RNU6-645P-201ENST00000364649 106 ntBASIC-1.74□□□□□ -2.69
RAB3IPQ96QF0 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.74□□□□□ -2.69
RAB3IPQ96QF0 U2.7-201ENST00000619197 100 ntBASIC-1.74□□□□□ -2.69
RAB3IPQ96QF0 MIR5683-201ENST00000636514 76 ntBASIC-1.74□□□□□ -2.69
RAB3IPQ96QF0 RNU6-246P-201ENST00000384702 107 ntBASIC-1.75□□□□□ -2.69
RAB3IPQ96QF0 RNU6-267P-201ENST00000516714 103 ntBASIC-1.75□□□□□ -2.69
RAB3IPQ96QF0 RNU6-219P-201ENST00000364728 107 ntBASIC-1.76□□□□□ -2.69
RAB3IPQ96QF0 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.76□□□□□ -2.69
RAB3IPQ96QF0 SNORD19-201ENST00000391191 68 ntBASIC-1.76□□□□□ -2.69
RAB3IPQ96QF0 MIR3910-1-201ENST00000580936 111 ntBASIC-1.76□□□□□ -2.69
RAB3IPQ96QF0 MT-TM-201ENST00000387377 68 ntBASIC-1.77□□□□□ -2.69
RAB3IPQ96QF0 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.78□□□□□ -2.69
RAB3IPQ96QF0 RNU6-807P-201ENST00000516805 107 ntBASIC-1.78□□□□□ -2.69
RAB3IPQ96QF0 MIR548BB-201ENST00000626714 66 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 339.7 ms