Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MIR8068-201ENST00000618032 68 ntBASIC-0.82□□□□□ -2.54
CHMP4CQ96CF2 SNORA3B-201ENST00000391305 131 ntBASIC-0.83□□□□□ -2.54
CHMP4CQ96CF2 AL021921.1-201ENST00000442774 93 ntBASIC-0.84□□□□□ -2.54
CHMP4CQ96CF2 RNU6-518P-201ENST00000516056 96 ntBASIC-0.84□□□□□ -2.54
CHMP4CQ96CF2 AC062037.1-201ENST00000605302 128 ntBASIC-0.84□□□□□ -2.54
CHMP4CQ96CF2 RNU7-154P-201ENST00000516194 62 ntBASIC-0.85□□□□□ -2.55
CHMP4CQ96CF2 MIR4666B-201ENST00000578142 81 ntBASIC-0.85□□□□□ -2.55
CHMP4CQ96CF2 MIR409-201ENST00000362237 79 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 SNORD74.6-201ENST00000364796 70 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 MIR548C-201ENST00000384815 97 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.86□□□□□ -2.55
CHMP4CQ96CF2 SNORD114-14-201ENST00000362723 75 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 SNORD22.1-201ENST00000516331 125 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-1-201ENST00000578940 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-2-201ENST00000579107 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-3-201ENST00000579566 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR3179-4-201ENST00000617599 84 ntBASIC-0.87□□□□□ -2.55
CHMP4CQ96CF2 MIR8053-201ENST00000613344 75 ntBASIC-0.88□□□□□ -2.55
CHMP4CQ96CF2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.89□□□□□ -2.55
CHMP4CQ96CF2 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.9□□□□□ -2.55
CHMP4CQ96CF2 SNORD73B-201ENST00000364394 72 ntBASIC-0.9□□□□□ -2.55
CHMP4CQ96CF2 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
CHMP4CQ96CF2 MIR519A2-201ENST00000384990 87 ntBASIC-0.91□□□□□ -2.56
CHMP4CQ96CF2 RNA5SP331-201ENST00000364986 107 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 MIR124-2-201ENST00000385081 109 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 MTND4LP1-201ENST00000446263 157 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 U2.7-201ENST00000619197 100 ntBASIC-0.92□□□□□ -2.56
CHMP4CQ96CF2 SNORD57-201ENST00000448188 72 ntBASIC-0.93□□□□□ -2.56
CHMP4CQ96CF2 SNORD18.2-201ENST00000459604 70 ntBASIC-0.93□□□□□ -2.56
CHMP4CQ96CF2 RNU6-982P-201ENST00000516216 102 ntBASIC-0.93□□□□□ -2.56
CHMP4CQ96CF2 SCARNA18B-201ENST00000458806 135 ntBASIC-0.94□□□□□ -2.56
CHMP4CQ96CF2 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 SNORA26.2-201ENST00000390922 122 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 RNY1P9-201ENST00000532431 109 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 AL445584.3-201ENST00000617173 78 ntBASIC-0.95□□□□□ -2.56
CHMP4CQ96CF2 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 AP000533.3-201ENST00000447704 118 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 RNU6-881P-201ENST00000516813 102 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 MIR4464-201ENST00000580818 92 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 MIR664A-201ENST00000626086 82 ntBASIC-0.96□□□□□ -2.56
CHMP4CQ96CF2 SNORD115-22-201ENST00000364456 82 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 MIR196A1-201ENST00000388006 70 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 RNU6-70P-201ENST00000516438 60 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 MIR6888-201ENST00000621977 67 ntBASIC-0.97□□□□□ -2.56
CHMP4CQ96CF2 RNA5SP266-201ENST00000410273 108 ntBASIC-0.98□□□□□ -2.57
CHMP4CQ96CF2 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.98□□□□□ -2.57
CHMP4CQ96CF2 MIR3202-2-201ENST00000635980 79 ntBASIC-0.98□□□□□ -2.57
CHMP4CQ96CF2 RNU6-787P-201ENST00000384032 107 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNU6-721P-201ENST00000410155 105 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNY4P29-201ENST00000410801 97 ntBASIC-0.99□□□□□ -2.57
CHMP4CQ96CF2 RNU6-924P-201ENST00000362926 108 ntBASIC-1□□□□□ -2.57
CHMP4CQ96CF2 SNORD113.1-201ENST00000363280 73 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 RNU6-668P-201ENST00000364180 107 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 SNORD45A-201ENST00000384512 84 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 MIR154-201ENST00000385243 84 ntBASIC-1.01□□□□□ -2.57
CHMP4CQ96CF2 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.02□□□□□ -2.57
CHMP4CQ96CF2 MIR517B-201ENST00000385102 67 ntBASIC-1.02□□□□□ -2.57
CHMP4CQ96CF2 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.03□□□□□ -2.57
CHMP4CQ96CF2 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.03□□□□□ -2.57
CHMP4CQ96CF2 RNA5SP173-201ENST00000364857 136 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 RNU6-895P-201ENST00000384125 103 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 SNORD83B-201ENST00000386745 93 ntBASIC-1.05□□□□□ -2.58
CHMP4CQ96CF2 SNORD114-25-201ENST00000363742 72 ntBASIC-1.06□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.06□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.06□□□□□ -2.58
CHMP4CQ96CF2 RNU6-587P-201ENST00000391282 106 ntBASIC-1.07□□□□□ -2.58
CHMP4CQ96CF2 RNU7-174P-201ENST00000516248 59 ntBASIC-1.07□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.08□□□□□ -2.58
CHMP4CQ96CF2 MIR1302-4-201ENST00000408701 150 ntBASIC-1.08□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.09□□□□□ -2.58
CHMP4CQ96CF2 RNU6-573P-201ENST00000383938 106 ntBASIC-1.09□□□□□ -2.58
CHMP4CQ96CF2 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.09□□□□□ -2.58
CHMP4CQ96CF2 RNA5SP215-201ENST00000363440 122 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 SNX3P1X-201ENST00000414887 175 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 MIR3134-201ENST00000579433 74 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 U7.4-201ENST00000614961 63 ntBASIC-1.1□□□□□ -2.59
CHMP4CQ96CF2 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CHMP4CQ96CF2 MIR548V-201ENST00000584165 80 ntBASIC-1.11□□□□□ -2.59
CHMP4CQ96CF2 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.11□□□□□ -2.59
CHMP4CQ96CF2 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 RNU6-698P-201ENST00000363523 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 RNU6-34P-201ENST00000364874 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 RNU6-411P-201ENST00000384451 107 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 AL500527.2-201ENST00000454105 95 ntBASIC-1.12□□□□□ -2.59
CHMP4CQ96CF2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.14□□□□□ -2.59
CHMP4CQ96CF2 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.14□□□□□ -2.59
CHMP4CQ96CF2 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.15□□□□□ -2.59
CHMP4CQ96CF2 uc_338.19-201ENST00000616808 99 ntBASIC-1.15□□□□□ -2.59
CHMP4CQ96CF2 MIR429-201ENST00000362106 83 ntBASIC-1.16□□□□□ -2.6
CHMP4CQ96CF2 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.16□□□□□ -2.6
CHMP4CQ96CF2 MIR587-201ENST00000384845 96 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms