Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MIR3128-201ENST00000581957 66 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 MIR8053-201ENST00000613344 75 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 U6.96-201ENST00000636425 70 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 MIR548C-201ENST00000384815 97 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 RNU4-40P-201ENST00000364351 143 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 MIR548Z-201ENST00000584743 97 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 MIR577-201ENST00000385196 96 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 RNU6-394P-201ENST00000410735 107 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 AL158147.1-201ENST00000443970 75 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 RNU7-120P-201ENST00000459334 63 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.48□□□□□ -2.49
SYNE1Q8NF91 RNA5SP215-201ENST00000363440 122 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 AL117187.1-201ENST00000555482 181 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 RNU6-800P-201ENST00000384473 103 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 MIR548A3-201ENST00000385297 97 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 MTCYBP9-201ENST00000431021 303 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.658-201ENST00000515990 97 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 RNU6-111P-201ENST00000517179 105 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 RNU6-563P-201ENST00000364872 108 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 MIR509-1-201ENST00000385265 94 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 MIR509-2-201ENST00000390724 91 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 RNA5SP106-201ENST00000517274 100 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 MIR23C-201ENST00000579846 100 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 SNORA19-201ENST00000384737 128 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 AL353621.2-201ENST00000605340 133 ntBASIC-0.49□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU7-174P-201ENST00000516248 59 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-816P-201ENST00000390914 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 MIR1236-201ENST00000408340 102 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 AL117351.2-201ENST00000513571 157 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-557P-201ENST00000516842 110 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-686P-201ENST00000364839 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 MTATP8P2-201ENST00000435212 202 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 MIR4668-201ENST00000582284 70 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 AC005520.4-201ENST00000604337 90 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-624P-201ENST00000363411 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNA5SP173-201ENST00000364857 136 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 MIR579-201ENST00000385221 98 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 SCARNA23-201ENST00000516060 130 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-79P-201ENST00000362511 107 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 RNU6-755P-201ENST00000364400 103 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 MIR630-201ENST00000384957 97 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 MIR125B1-201ENST00000385236 88 ntBASIC-0.5□□□□□ -2.49
SYNE1Q8NF91 AC120024.2-201ENST00000576526 175 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 U6.95-201ENST00000636931 70 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 AC004792.1-201ENST00000614523 137 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 MIR429-201ENST00000362106 83 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 SNORA20.1-201ENST00000364790 130 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 MIR548AA1-201ENST00000384971 97 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 SNORD1B-201ENST00000363091 84 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 RNU6-668P-201ENST00000364180 107 ntBASIC-0.51□□□□□ -2.49
SYNE1Q8NF91 RNU6-247P-201ENST00000362636 107 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 MIR606-201ENST00000384851 96 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 RNU7-107P-201ENST00000459121 61 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 RNU6-669P-201ENST00000365575 107 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 SNORD45.1-201ENST00000363181 77 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 SNORD116-16-201ENST00000384533 92 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 RNU7-197P-201ENST00000458836 62 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.520-201ENST00000384556 102 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 AC141273.2-201ENST00000618989 130 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 RNU6-608P-201ENST00000383927 104 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 AC006160.2-201ENST00000637708 154 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 SNORA40.13-201ENST00000516379 120 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 AC022559.1-201ENST00000520905 205 ntBASIC-0.52□□□□□ -2.49
SYNE1Q8NF91 SNORA27.2-201ENST00000363365 126 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 RNU6-1128P-201ENST00000362825 109 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 RNU6-828P-201ENST00000364876 107 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 RNU6-402P-201ENST00000410678 103 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 MIR1297-201ENST00000637311 77 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 RNU6-182P-201ENST00000516970 105 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 MTCYBP6-201ENST00000441810 138 ntBASIC-0.53□□□□□ -2.49
SYNE1Q8NF91 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms