Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.62□□□□□ -2.51
PDLIM3Q53GG5 MIR494-201ENST00000349529 81 ntBASIC-0.63□□□□□ -2.51
PDLIM3Q53GG5 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.63□□□□□ -2.51
PDLIM3Q53GG5 SNORD115-23-201ENST00000364461 82 ntBASIC-0.63□□□□□ -2.51
PDLIM3Q53GG5 MIR521-2-201ENST00000384818 87 ntBASIC-0.63□□□□□ -2.51
PDLIM3Q53GG5 AL353803.5-201ENST00000599815 141 ntBASIC-0.63□□□□□ -2.51
PDLIM3Q53GG5 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.64□□□□□ -2.51
PDLIM3Q53GG5 MIR124-2-201ENST00000385081 109 ntBASIC-0.64□□□□□ -2.51
PDLIM3Q53GG5 MIR518B-201ENST00000385127 83 ntBASIC-0.64□□□□□ -2.51
PDLIM3Q53GG5 RNU6-721P-201ENST00000410155 105 ntBASIC-0.64□□□□□ -2.51
PDLIM3Q53GG5 SNORD22.1-201ENST00000516331 125 ntBASIC-0.64□□□□□ -2.51
PDLIM3Q53GG5 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 SNORA8.1-201ENST00000384250 140 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 MIR548C-201ENST00000384815 97 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 AC021146.6-201ENST00000514659 117 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 RNU6-303P-201ENST00000517091 106 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 MIR3115-201ENST00000577915 68 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 MIR3179-1-201ENST00000578940 84 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 MIR3179-2-201ENST00000579107 84 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 MIR3179-3-201ENST00000579566 84 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 MIR3179-4-201ENST00000617599 84 ntBASIC-0.65□□□□□ -2.51
PDLIM3Q53GG5 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.66□□□□□ -2.52
PDLIM3Q53GG5 RNU6-557P-201ENST00000516842 110 ntBASIC-0.66□□□□□ -2.52
PDLIM3Q53GG5 MIR5588-201ENST00000581890 63 ntBASIC-0.66□□□□□ -2.52
PDLIM3Q53GG5 MIR3675-201ENST00000583661 73 ntBASIC-0.66□□□□□ -2.52
PDLIM3Q53GG5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.66□□□□□ -2.52
PDLIM3Q53GG5 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.67□□□□□ -2.52
PDLIM3Q53GG5 RNU6-294P-201ENST00000364999 102 ntBASIC-0.67□□□□□ -2.52
PDLIM3Q53GG5 SNORD18.2-201ENST00000459604 70 ntBASIC-0.67□□□□□ -2.52
PDLIM3Q53GG5 RNU6-881P-201ENST00000516813 102 ntBASIC-0.67□□□□□ -2.52
PDLIM3Q53GG5 MIR3165-201ENST00000579874 75 ntBASIC-0.67□□□□□ -2.52
PDLIM3Q53GG5 MIR6739-201ENST00000622461 75 ntBASIC-0.67□□□□□ -2.52
PDLIM3Q53GG5 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.68□□□□□ -2.52
PDLIM3Q53GG5 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.68□□□□□ -2.52
PDLIM3Q53GG5 AP000533.3-201ENST00000447704 118 ntBASIC-0.68□□□□□ -2.52
PDLIM3Q53GG5 AC022137.1-201ENST00000483735 151 ntBASIC-0.68□□□□□ -2.52
PDLIM3Q53GG5 RNU6-518P-201ENST00000516056 96 ntBASIC-0.68□□□□□ -2.52
PDLIM3Q53GG5 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.69□□□□□ -2.52
PDLIM3Q53GG5 SNORD45.1-201ENST00000363181 77 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 RNU6-645P-201ENST00000364649 106 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 SNORA62.4-201ENST00000365504 151 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 RNU6-604P-201ENST00000390917 100 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 RNU6-380P-201ENST00000410207 107 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 SNORA13-201ENST00000458790 133 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 MIR5582-201ENST00000579697 68 ntBASIC-0.7□□□□□ -2.52
PDLIM3Q53GG5 SNORD114-25-201ENST00000363742 72 ntBASIC-0.71□□□□□ -2.52
PDLIM3Q53GG5 MIR517B-201ENST00000385102 67 ntBASIC-0.71□□□□□ -2.52
PDLIM3Q53GG5 RNA5SP470-201ENST00000516463 106 ntBASIC-0.71□□□□□ -2.52
PDLIM3Q53GG5 RNU6-656P-201ENST00000516785 107 ntBASIC-0.71□□□□□ -2.52
PDLIM3Q53GG5 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.72□□□□□ -2.52
PDLIM3Q53GG5 RNU6-979P-201ENST00000383896 107 ntBASIC-0.72□□□□□ -2.52
PDLIM3Q53GG5 MIR519A2-201ENST00000384990 87 ntBASIC-0.72□□□□□ -2.52
PDLIM3Q53GG5 MIR196A1-201ENST00000388006 70 ntBASIC-0.72□□□□□ -2.52
PDLIM3Q53GG5 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.73□□□□□ -2.53
PDLIM3Q53GG5 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.73□□□□□ -2.53
PDLIM3Q53GG5 RNU6-807P-201ENST00000516805 107 ntBASIC-0.73□□□□□ -2.53
PDLIM3Q53GG5 RNU6-242P-201ENST00000384359 107 ntBASIC-0.74□□□□□ -2.53
PDLIM3Q53GG5 RNU6-24P-201ENST00000384440 107 ntBASIC-0.74□□□□□ -2.53
PDLIM3Q53GG5 MIR450A2-201ENST00000385022 100 ntBASIC-0.74□□□□□ -2.53
PDLIM3Q53GG5 AC074348.1-201ENST00000426503 132 ntBASIC-0.74□□□□□ -2.53
PDLIM3Q53GG5 RNU6-982P-201ENST00000516216 102 ntBASIC-0.74□□□□□ -2.53
PDLIM3Q53GG5 MIR6888-201ENST00000621977 67 ntBASIC-0.74□□□□□ -2.53
PDLIM3Q53GG5 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.75□□□□□ -2.53
PDLIM3Q53GG5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
PDLIM3Q53GG5 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.75□□□□□ -2.53
PDLIM3Q53GG5 MIR4464-201ENST00000580818 92 ntBASIC-0.75□□□□□ -2.53
PDLIM3Q53GG5 SNORD74.6-201ENST00000364796 70 ntBASIC-0.76□□□□□ -2.53
PDLIM3Q53GG5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.76□□□□□ -2.53
PDLIM3Q53GG5 AL500527.2-201ENST00000454105 95 ntBASIC-0.76□□□□□ -2.53
PDLIM3Q53GG5 MIR664A-201ENST00000626086 82 ntBASIC-0.76□□□□□ -2.53
PDLIM3Q53GG5 AL445584.3-201ENST00000617173 78 ntBASIC-0.77□□□□□ -2.53
PDLIM3Q53GG5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.77□□□□□ -2.53
PDLIM3Q53GG5 MIR1297-201ENST00000637311 77 ntBASIC-0.77□□□□□ -2.53
PDLIM3Q53GG5 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.78□□□□□ -2.53
PDLIM3Q53GG5 SNORD83B-201ENST00000386745 93 ntBASIC-0.78□□□□□ -2.53
PDLIM3Q53GG5 AL021921.1-201ENST00000442774 93 ntBASIC-0.78□□□□□ -2.53
PDLIM3Q53GG5 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.79□□□□□ -2.54
PDLIM3Q53GG5 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.79□□□□□ -2.54
PDLIM3Q53GG5 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.79□□□□□ -2.54
PDLIM3Q53GG5 RNU6-431P-201ENST00000383874 107 ntBASIC-0.79□□□□□ -2.54
PDLIM3Q53GG5 RNU7-171P-201ENST00000459581 62 ntBASIC-0.79□□□□□ -2.54
PDLIM3Q53GG5 U2.7-201ENST00000619197 100 ntBASIC-0.79□□□□□ -2.54
PDLIM3Q53GG5 RNU6-315P-201ENST00000362666 107 ntBASIC-0.8□□□□□ -2.54
PDLIM3Q53GG5 SNORD114-17-201ENST00000364699 75 ntBASIC-0.8□□□□□ -2.54
PDLIM3Q53GG5 SNORD64-201ENST00000386683 67 ntBASIC-0.8□□□□□ -2.54
PDLIM3Q53GG5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.8□□□□□ -2.54
PDLIM3Q53GG5 RNU7-154P-201ENST00000516194 62 ntBASIC-0.8□□□□□ -2.54
PDLIM3Q53GG5 RNA5SP170-201ENST00000517150 101 ntBASIC-0.81□□□□□ -2.54
PDLIM3Q53GG5 SCARNA18B-201ENST00000458806 135 ntBASIC-0.82□□□□□ -2.54
PDLIM3Q53GG5 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.82□□□□□ -2.54
PDLIM3Q53GG5 RNU6-119P-201ENST00000364882 107 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 MIR147A-201ENST00000385079 72 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 MIR4712-201ENST00000583750 82 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 MIR548V-201ENST00000584165 80 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 AC062037.1-201ENST00000605302 128 ntBASIC-0.83□□□□□ -2.54
PDLIM3Q53GG5 MIR1245B-201ENST00000636115 69 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms