Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL021921.1-201ENST00000442774 93 ntBASIC-1.12□□□□□ -2.59
CCDC38Q502W7 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.12□□□□□ -2.59
CCDC38Q502W7 AL445584.3-201ENST00000617173 78 ntBASIC-1.12□□□□□ -2.59
CCDC38Q502W7 RNU6-330P-201ENST00000363015 107 ntBASIC-1.13□□□□□ -2.59
CCDC38Q502W7 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.13□□□□□ -2.59
CCDC38Q502W7 RNU6-807P-201ENST00000516805 107 ntBASIC-1.13□□□□□ -2.59
CCDC38Q502W7 MIR6888-201ENST00000621977 67 ntBASIC-1.13□□□□□ -2.59
CCDC38Q502W7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.13□□□□□ -2.59
CCDC38Q502W7 MIR517B-201ENST00000385102 67 ntBASIC-1.14□□□□□ -2.59
CCDC38Q502W7 RNU6-518P-201ENST00000516056 96 ntBASIC-1.14□□□□□ -2.59
CCDC38Q502W7 MIR5588-201ENST00000581890 63 ntBASIC-1.14□□□□□ -2.59
CCDC38Q502W7 RNU6-645P-201ENST00000364649 106 ntBASIC-1.15□□□□□ -2.59
CCDC38Q502W7 MIR519A2-201ENST00000384990 87 ntBASIC-1.15□□□□□ -2.59
CCDC38Q502W7 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.15□□□□□ -2.59
CCDC38Q502W7 MIR6738-201ENST00000619620 64 ntBASIC-1.15□□□□□ -2.59
CCDC38Q502W7 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.16□□□□□ -2.6
CCDC38Q502W7 SNX3P1X-201ENST00000414887 175 ntBASIC-1.16□□□□□ -2.6
CCDC38Q502W7 RNU6-315P-201ENST00000362666 107 ntBASIC-1.17□□□□□ -2.6
CCDC38Q502W7 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.17□□□□□ -2.6
CCDC38Q502W7 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.17□□□□□ -2.6
CCDC38Q502W7 RNU6-979P-201ENST00000383896 107 ntBASIC-1.18□□□□□ -2.6
CCDC38Q502W7 RNU6-10P-201ENST00000384036 107 ntBASIC-1.18□□□□□ -2.6
CCDC38Q502W7 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.18□□□□□ -2.6
CCDC38Q502W7 RNU6-924P-201ENST00000362926 108 ntBASIC-1.19□□□□□ -2.6
CCDC38Q502W7 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.2□□□□□ -2.6
CCDC38Q502W7 U2.7-201ENST00000619197 100 ntBASIC-1.2□□□□□ -2.6
CCDC38Q502W7 SNORD45.1-201ENST00000363181 77 ntBASIC-1.21□□□□□ -2.6
CCDC38Q502W7 MIR196A1-201ENST00000388006 70 ntBASIC-1.21□□□□□ -2.6
CCDC38Q502W7 SCARNA17-201ENST00000516183 144 ntBASIC-1.21□□□□□ -2.6
CCDC38Q502W7 MIR4324-201ENST00000584846 72 ntBASIC-1.21□□□□□ -2.6
CCDC38Q502W7 RNU6-604P-201ENST00000390917 100 ntBASIC-1.22□□□□□ -2.6
CCDC38Q502W7 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.22□□□□□ -2.6
CCDC38Q502W7 MIR4484-201ENST00000582855 83 ntBASIC-1.22□□□□□ -2.6
CCDC38Q502W7 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.23□□□□□ -2.61
CCDC38Q502W7 RNU7-171P-201ENST00000459581 62 ntBASIC-1.23□□□□□ -2.61
CCDC38Q502W7 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.25□□□□□ -2.61
CCDC38Q502W7 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.25□□□□□ -2.61
CCDC38Q502W7 MIR4320-201ENST00000636981 65 ntBASIC-1.25□□□□□ -2.61
CCDC38Q502W7 RNU6-294P-201ENST00000364999 102 ntBASIC-1.26□□□□□ -2.61
CCDC38Q502W7 MIR450A2-201ENST00000385022 100 ntBASIC-1.26□□□□□ -2.61
CCDC38Q502W7 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.27□□□□□ -2.61
CCDC38Q502W7 MIR548C-201ENST00000384815 97 ntBASIC-1.27□□□□□ -2.61
CCDC38Q502W7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
CCDC38Q502W7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.28□□□□□ -2.61
CCDC38Q502W7 RNU6-242P-201ENST00000384359 107 ntBASIC-1.28□□□□□ -2.61
CCDC38Q502W7 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.28□□□□□ -2.61
CCDC38Q502W7 SNORD83B-201ENST00000386745 93 ntBASIC-1.29□□□□□ -2.62
CCDC38Q502W7 MIR1468-201ENST00000410600 86 ntBASIC-1.29□□□□□ -2.62
CCDC38Q502W7 MIR8053-201ENST00000613344 75 ntBASIC-1.29□□□□□ -2.62
CCDC38Q502W7 MIR494-201ENST00000349529 81 ntBASIC-1.3□□□□□ -2.62
CCDC38Q502W7 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.3□□□□□ -2.62
CCDC38Q502W7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.3□□□□□ -2.62
CCDC38Q502W7 RNU6-982P-201ENST00000516216 102 ntBASIC-1.3□□□□□ -2.62
CCDC38Q502W7 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.31□□□□□ -2.62
CCDC38Q502W7 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.31□□□□□ -2.62
CCDC38Q502W7 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.31□□□□□ -2.62
CCDC38Q502W7 MIR5582-201ENST00000579697 68 ntBASIC-1.31□□□□□ -2.62
CCDC38Q502W7 MIR1245B-201ENST00000636115 69 ntBASIC-1.31□□□□□ -2.62
CCDC38Q502W7 MTND4LP1-201ENST00000446263 157 ntBASIC-1.32□□□□□ -2.62
CCDC38Q502W7 MIR147A-201ENST00000385079 72 ntBASIC-1.33□□□□□ -2.62
CCDC38Q502W7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
CCDC38Q502W7 SNORD114-25-201ENST00000363742 72 ntBASIC-1.34□□□□□ -2.62
CCDC38Q502W7 RNU7-174P-201ENST00000516248 59 ntBASIC-1.34□□□□□ -2.62
CCDC38Q502W7 MIR4712-201ENST00000583750 82 ntBASIC-1.34□□□□□ -2.62
CCDC38Q502W7 SNORD115-22-201ENST00000364456 82 ntBASIC-1.35□□□□□ -2.63
CCDC38Q502W7 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.35□□□□□ -2.63
CCDC38Q502W7 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.35□□□□□ -2.63
CCDC38Q502W7 MIR198-201ENST00000637333 62 ntBASIC-1.36□□□□□ -2.63
CCDC38Q502W7 RNU6-431P-201ENST00000383874 107 ntBASIC-1.37□□□□□ -2.63
CCDC38Q502W7 RNU6-820P-201ENST00000384273 107 ntBASIC-1.37□□□□□ -2.63
CCDC38Q502W7 MIR601-201ENST00000385256 79 ntBASIC-1.37□□□□□ -2.63
CCDC38Q502W7 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.38□□□□□ -2.63
CCDC38Q502W7 SNORD115-33-201ENST00000363723 82 ntBASIC-1.38□□□□□ -2.63
CCDC38Q502W7 SNORD64-201ENST00000386683 67 ntBASIC-1.38□□□□□ -2.63
CCDC38Q502W7 SNORA26.4-201ENST00000391188 123 ntBASIC-1.38□□□□□ -2.63
CCDC38Q502W7 MIR4666B-201ENST00000578142 81 ntBASIC-1.39□□□□□ -2.63
CCDC38Q502W7 MIR548AG1-201ENST00000579932 66 ntBASIC-1.39□□□□□ -2.63
CCDC38Q502W7 SNORD113.1-201ENST00000363280 73 ntBASIC-1.4□□□□□ -2.63
CCDC38Q502W7 MIR378F-201ENST00000578143 78 ntBASIC-1.4□□□□□ -2.63
CCDC38Q502W7 RNU6-668P-201ENST00000364180 107 ntBASIC-1.41□□□□□ -2.64
CCDC38Q502W7 SCARNA18B-201ENST00000458806 135 ntBASIC-1.41□□□□□ -2.64
CCDC38Q502W7 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.42□□□□□ -2.64
CCDC38Q502W7 RNU6-698P-201ENST00000363523 107 ntBASIC-1.42□□□□□ -2.64
CCDC38Q502W7 RNA5SP192-201ENST00000364404 120 ntBASIC-1.42□□□□□ -2.64
CCDC38Q502W7 RNU6-34P-201ENST00000364874 107 ntBASIC-1.42□□□□□ -2.64
CCDC38Q502W7 MIR664A-201ENST00000626086 82 ntBASIC-1.42□□□□□ -2.64
CCDC38Q502W7 RNA5SP215-201ENST00000363440 122 ntBASIC-1.43□□□□□ -2.64
CCDC38Q502W7 RNU6-246P-201ENST00000384702 107 ntBASIC-1.43□□□□□ -2.64
CCDC38Q502W7 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.44□□□□□ -2.64
CCDC38Q502W7 SNORD45A-201ENST00000384512 84 ntBASIC-1.45□□□□□ -2.64
CCDC38Q502W7 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.45□□□□□ -2.64
CCDC38Q502W7 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 RNU6-24P-201ENST00000384440 107 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 RNU6-587P-201ENST00000391282 106 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 AL500527.2-201ENST00000454105 95 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 SNORD63.1-201ENST00000516178 80 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 RNU6-70P-201ENST00000516438 60 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 U7.5-201ENST00000517224 61 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 MIR3115-201ENST00000577915 68 ntBASIC-1.46□□□□□ -2.64
CCDC38Q502W7 MIR4499-201ENST00000584834 69 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 285 ms