Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SNORD116-19-201ENST00000384729 92 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 MIR1302-5-201ENST00000408164 150 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.67□□□□□ -2.68
CNTNAP1P78357 RNA5SP405-201ENST00000363059 114 ntBASIC-1.68□□□□□ -2.68
CNTNAP1P78357 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
CNTNAP1P78357 RNU6-340P-201ENST00000364005 107 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 RNU2-51P-201ENST00000410708 197 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 AL353691.2-201ENST00000443795 59 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 RNU7-61P-201ENST00000515897 61 ntBASIC-1.69□□□□□ -2.68
CNTNAP1P78357 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.7□□□□□ -2.68
CNTNAP1P78357 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 RNU6-194P-201ENST00000363862 105 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 MIR590-201ENST00000385008 97 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 RNU6-907P-201ENST00000390924 102 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.71□□□□□ -2.68
CNTNAP1P78357 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.72□□□□□ -2.68
CNTNAP1P78357 SNORD115-22-201ENST00000364456 82 ntBASIC-1.72□□□□□ -2.69
CNTNAP1P78357 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.72□□□□□ -2.69
CNTNAP1P78357 RNU7-153P-201ENST00000516455 62 ntBASIC-1.72□□□□□ -2.69
CNTNAP1P78357 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.73□□□□□ -2.69
CNTNAP1P78357 SNORD77.2-201ENST00000391045 68 ntBASIC-1.73□□□□□ -2.69
CNTNAP1P78357 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
CNTNAP1P78357 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 AL078595.1-201ENST00000404458 226 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 U7.3-201ENST00000616123 62 ntBASIC-1.74□□□□□ -2.69
CNTNAP1P78357 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 AL035461.1-201ENST00000421490 332 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.75□□□□□ -2.69
CNTNAP1P78357 MIR519C-201ENST00000385053 87 ntBASIC-1.76□□□□□ -2.69
CNTNAP1P78357 RNU6-807P-201ENST00000516805 107 ntBASIC-1.76□□□□□ -2.69
CNTNAP1P78357 SNORD115-27-201ENST00000364430 82 ntBASIC-1.77□□□□□ -2.69
CNTNAP1P78357 RNU6-164P-201ENST00000364604 103 ntBASIC-1.77□□□□□ -2.69
CNTNAP1P78357 RNU6-656P-201ENST00000516785 107 ntBASIC-1.77□□□□□ -2.69
CNTNAP1P78357 MTATP8P2-201ENST00000435212 202 ntBASIC-1.78□□□□□ -2.69
CNTNAP1P78357 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.79□□□□□ -2.7
CNTNAP1P78357 RNU6-162P-201ENST00000516228 103 ntBASIC-1.79□□□□□ -2.7
CNTNAP1P78357 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
CNTNAP1P78357 U2.7-201ENST00000619197 100 ntBASIC-1.8□□□□□ -2.7
CNTNAP1P78357 RNA5SP26-201ENST00000362406 119 ntBASIC-1.81□□□□□ -2.7
CNTNAP1P78357 RNU6-106P-201ENST00000384405 107 ntBASIC-1.81□□□□□ -2.7
CNTNAP1P78357 RNU6-554P-201ENST00000410466 106 ntBASIC-1.81□□□□□ -2.7
CNTNAP1P78357 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 RNU6-109P-201ENST00000516364 107 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 RNU6-184P-201ENST00000516514 107 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 RNU6-794P-201ENST00000517261 64 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 MIR4490-201ENST00000582647 84 ntBASIC-1.82□□□□□ -2.7
CNTNAP1P78357 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.83□□□□□ -2.7
CNTNAP1P78357 RNU6-246P-201ENST00000384702 107 ntBASIC-1.83□□□□□ -2.7
CNTNAP1P78357 SNORD115-37-201ENST00000363768 82 ntBASIC-1.84□□□□□ -2.7
CNTNAP1P78357 U7.5-201ENST00000517224 61 ntBASIC-1.84□□□□□ -2.7
CNTNAP1P78357 MIR5683-201ENST00000636514 76 ntBASIC-1.84□□□□□ -2.7
CNTNAP1P78357 RNU6-230P-201ENST00000362457 104 ntBASIC-1.85□□□□□ -2.7
CNTNAP1P78357 RNU6-633P-201ENST00000362612 103 ntBASIC-1.85□□□□□ -2.71
CNTNAP1P78357 MIR548AG1-201ENST00000579932 66 ntBASIC-1.85□□□□□ -2.71
CNTNAP1P78357 RNU6-645P-201ENST00000364649 106 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 SNORD19-201ENST00000391191 68 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 RNU7-88P-201ENST00000458752 63 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.86□□□□□ -2.71
CNTNAP1P78357 RNU6-766P-201ENST00000362478 107 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 AC008267.6-201ENST00000441664 139 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 AC090425.1-201ENST00000610007 140 ntBASIC-1.87□□□□□ -2.71
CNTNAP1P78357 RNU6-624P-201ENST00000363411 107 ntBASIC-1.88□□□□□ -2.71
CNTNAP1P78357 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.88□□□□□ -2.71
CNTNAP1P78357 RNU6-774P-201ENST00000363238 107 ntBASIC-1.89□□□□□ -2.71
CNTNAP1P78357 MIR2052-201ENST00000636055 55 ntBASIC-1.89□□□□□ -2.71
CNTNAP1P78357 SNORA19-201ENST00000384737 128 ntBASIC-1.9□□□□□ -2.71
CNTNAP1P78357 RNU6-803P-201ENST00000516034 102 ntBASIC-1.9□□□□□ -2.71
CNTNAP1P78357 AP002795.1-201ENST00000534879 84 ntBASIC-1.9□□□□□ -2.71
CNTNAP1P78357 RNU6-959P-201ENST00000384671 107 ntBASIC-1.91□□□□□ -2.72
CNTNAP1P78357 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.91□□□□□ -2.72
CNTNAP1P78357 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.91□□□□□ -2.72
CNTNAP1P78357 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.92□□□□□ -2.72
CNTNAP1P78357 AC093729.1-201ENST00000513074 128 ntBASIC-1.92□□□□□ -2.72
CNTNAP1P78357 MIR4668-201ENST00000582284 70 ntBASIC-1.92□□□□□ -2.72
CNTNAP1P78357 MIR548C-201ENST00000384815 97 ntBASIC-1.93□□□□□ -2.72
CNTNAP1P78357 RNU6-557P-201ENST00000516842 110 ntBASIC-1.93□□□□□ -2.72
CNTNAP1P78357 MIR3133-201ENST00000583157 78 ntBASIC-1.93□□□□□ -2.72
CNTNAP1P78357 RNU6-834P-201ENST00000362367 110 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-478P-201ENST00000363904 110 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-400P-201ENST00000391173 106 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-168P-201ENST00000516189 101 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 RNU6-303P-201ENST00000517091 106 ntBASIC-1.94□□□□□ -2.72
CNTNAP1P78357 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.94□□□□□ -2.72
CNTNAP1P78357 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 RNU4-88P-201ENST00000411220 86 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 RNU7-174P-201ENST00000516248 59 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 RNU6-589P-201ENST00000516485 107 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 MIR3675-201ENST00000583661 73 ntBASIC-1.95□□□□□ -2.72
CNTNAP1P78357 MIR429-201ENST00000362106 83 ntBASIC-1.96□□□□□ -2.72
CNTNAP1P78357 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.96□□□□□ -2.72
CNTNAP1P78357 RNU6-458P-201ENST00000384179 107 ntBASIC-1.96□□□□□ -2.72
CNTNAP1P78357 U6.58-201ENST00000613107 107 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms