Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-7.01□□□□□ -3.53
RPL39P62891 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-7.01□□□□□ -3.53
RPL39P62891 RNU6-890P-201ENST00000384121 107 ntBASIC-7.02□□□□□ -3.53
RPL39P62891 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-7.02□□□□□ -3.53
RPL39P62891 AL162413.1-201ENST00000603198 110 ntBASIC-7.02□□□□□ -3.53
RPL39P62891 RNU6-451P-201ENST00000362921 107 ntBASIC-7.03□□□□□ -3.53
RPL39P62891 RNU6-908P-201ENST00000410160 94 ntBASIC-7.03□□□□□ -3.53
RPL39P62891 Z69908.1-201ENST00000622603 247 ntBASIC-7.03□□□□□ -3.53
RPL39P62891 Y_RNA.165-201ENST00000363721 102 ntBASIC-7.04□□□□□ -3.54
RPL39P62891 Y_RNA.339-201ENST00000365325 102 ntBASIC-7.04□□□□□ -3.54
RPL39P62891 SNORD45A-201ENST00000384512 84 ntBASIC-7.04□□□□□ -3.54
RPL39P62891 MIR519C-201ENST00000385053 87 ntBASIC-7.04□□□□□ -3.54
RPL39P62891 MIR548AI-201ENST00000579940 88 ntBASIC-7.04□□□□□ -3.54
RPL39P62891 Y_RNA.96-201ENST00000363092 109 ntBASIC-7.05□□□□□ -3.54
RPL39P62891 Y_RNA.337-201ENST00000365312 102 ntBASIC-7.05□□□□□ -3.54
RPL39P62891 Y_RNA.29-201ENST00000362570 113 ntBASIC-7.06□□□□□ -3.54
RPL39P62891 RNU7-119P-201ENST00000459279 63 ntBASIC-7.06□□□□□ -3.54
RPL39P62891 SCARNA23-201ENST00000516060 130 ntBASIC-7.06□□□□□ -3.54
RPL39P62891 Y_RNA.693-201ENST00000516641 110 ntBASIC-7.06□□□□□ -3.54
RPL39P62891 MIR4282-201ENST00000583613 67 ntBASIC-7.07□□□□□ -3.54
RPL39P62891 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-7.08□□□□□ -3.54
RPL39P62891 RNU6-542P-201ENST00000516405 103 ntBASIC-7.08□□□□□ -3.54
RPL39P62891 RNU6-557P-201ENST00000516842 110 ntBASIC-7.08□□□□□ -3.54
RPL39P62891 Y_RNA.544-201ENST00000384650 113 ntBASIC-7.09□□□□□ -3.54
RPL39P62891 MIR545-201ENST00000385085 106 ntBASIC-7.09□□□□□ -3.54
RPL39P62891 AC130289.1-201ENST00000577321 73 ntBASIC-7.09□□□□□ -3.54
RPL39P62891 AC040904.1-201ENST00000590850 223 ntBASIC-7.09□□□□□ -3.54
RPL39P62891 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-7.09□□□□□ -3.54
RPL39P62891 Y_RNA.44-201ENST00000362676 108 ntBASIC-7.1□□□□□ -3.55
RPL39P62891 RNU6-916P-201ENST00000516088 109 ntBASIC-7.1□□□□□ -3.55
RPL39P62891 MIR559-201ENST00000385188 96 ntBASIC-7.11□□□□□ -3.55
RPL39P62891 RNU6-699P-201ENST00000517081 110 ntBASIC-7.12□□□□□ -3.55
RPL39P62891 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-7.13□□□□□ -3.55
RPL39P62891 AP003461.1-201ENST00000528866 78 ntBASIC-7.13□□□□□ -3.55
RPL39P62891 MIR4528-201ENST00000577763 90 ntBASIC-7.13□□□□□ -3.55
RPL39P62891 MIR4679-2-201ENST00000578358 77 ntBASIC-7.13□□□□□ -3.55
RPL39P62891 AP001318.4-201ENST00000616637 121 ntBASIC-7.13□□□□□ -3.55
RPL39P62891 RNU6-1219P-201ENST00000516143 112 ntBASIC-7.14□□□□□ -3.55
RPL39P62891 Y_RNA.16-201ENST00000362421 102 ntBASIC-7.15□□□□□ -3.55
RPL39P62891 MIR1297-201ENST00000637311 77 ntBASIC-7.16□□□□□ -3.56
RPL39P62891 Y_RNA.154-201ENST00000363624 102 ntBASIC-7.17□□□□□ -3.56
RPL39P62891 RNU6-686P-201ENST00000364839 107 ntBASIC-7.17□□□□□ -3.56
RPL39P62891 RNU6-1325P-201ENST00000364905 105 ntBASIC-7.18□□□□□ -3.56
RPL39P62891 Y_RNA.532-201ENST00000384590 113 ntBASIC-7.18□□□□□ -3.56
RPL39P62891 RNU6-121P-201ENST00000410525 99 ntBASIC-7.18□□□□□ -3.56
RPL39P62891 SNORD116.3-201ENST00000517176 78 ntBASIC-7.18□□□□□ -3.56
RPL39P62891 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-7.19□□□□□ -3.56
RPL39P62891 AL035470.1-201ENST00000622571 220 ntBASIC-7.19□□□□□ -3.56
RPL39P62891 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-7.21□□□□□ -3.56
RPL39P62891 AC078883.4-201ENST00000623218 367 ntBASIC-7.21□□□□□ -3.56
RPL39P62891 RNU6-776P-201ENST00000364403 104 ntBASIC-7.22□□□□□ -3.57
RPL39P62891 RNU6-1022P-201ENST00000365049 104 ntBASIC-7.22□□□□□ -3.57
RPL39P62891 SNORD58B-201ENST00000607313 66 ntBASIC-7.22□□□□□ -3.57
RPL39P62891 RNU6-806P-201ENST00000365147 105 ntBASIC-7.23□□□□□ -3.57
RPL39P62891 SNORD116-24-201ENST00000384549 92 ntBASIC-7.23□□□□□ -3.57
RPL39P62891 RNU6-906P-201ENST00000384700 70 ntBASIC-7.23□□□□□ -3.57
RPL39P62891 MIR5009-201ENST00000578736 100 ntBASIC-7.23□□□□□ -3.57
RPL39P62891 RNU6-1188P-201ENST00000363795 107 ntBASIC-7.24□□□□□ -3.57
RPL39P62891 RNU6-450P-201ENST00000364654 107 ntBASIC-7.25□□□□□ -3.57
RPL39P62891 SNORD37.2-201ENST00000391075 66 ntBASIC-7.25□□□□□ -3.57
RPL39P62891 RNU6-483P-201ENST00000384088 108 ntBASIC-7.26□□□□□ -3.57
RPL39P62891 AC093729.1-201ENST00000513074 128 ntBASIC-7.26□□□□□ -3.57
RPL39P62891 MIRLET7A1-201ENST00000362295 80 ntBASIC-7.27□□□□□ -3.57
RPL39P62891 MIR5690-201ENST00000583739 73 ntBASIC-7.27□□□□□ -3.57
RPL39P62891 SNORA63.7-201ENST00000365579 123 ntBASIC-7.29□□□□□ -3.58
RPL39P62891 MIR4484-201ENST00000582855 83 ntBASIC-7.29□□□□□ -3.58
RPL39P62891 RNU6-379P-201ENST00000363813 104 ntBASIC-7.3□□□□□ -3.58
RPL39P62891 MIR6863-201ENST00000636112 90 ntBASIC-7.3□□□□□ -3.58
RPL39P62891 RNU6-979P-201ENST00000383896 107 ntBASIC-7.32□□□□□ -3.58
RPL39P62891 RNY3P16-201ENST00000516338 101 ntBASIC-7.32□□□□□ -3.58
RPL39P62891 MIR4801-201ENST00000582704 82 ntBASIC-7.33□□□□□ -3.58
RPL39P62891 RNU6-659P-201ENST00000516454 104 ntBASIC-7.35□□□□□ -3.59
RPL39P62891 AC015540.1-201ENST00000615828 501 ntBASIC-7.35□□□□□ -3.59
RPL39P62891 Y_RNA.496-201ENST00000384444 101 ntBASIC-7.36□□□□□ -3.59
RPL39P62891 RNU6-122P-201ENST00000516818 107 ntBASIC-7.36□□□□□ -3.59
RPL39P62891 RNU6-1255P-201ENST00000363434 112 ntBASIC-7.37□□□□□ -3.59
RPL39P62891 RNU6-915P-201ENST00000364943 103 ntBASIC-7.37□□□□□ -3.59
RPL39P62891 MTATP8P2-201ENST00000435212 202 ntBASIC-7.37□□□□□ -3.59
RPL39P62891 RNU6-1015P-201ENST00000517121 99 ntBASIC-7.37□□□□□ -3.59
RPL39P62891 Y_RNA.15-201ENST00000362420 102 ntBASIC-7.38□□□□□ -3.59
RPL39P62891 Y_RNA.722-201ENST00000517279 114 ntBASIC-7.38□□□□□ -3.59
RPL39P62891 Y_RNA.219-201ENST00000364232 113 ntBASIC-7.39□□□□□ -3.59
RPL39P62891 RNU6-895P-201ENST00000384125 103 ntBASIC-7.39□□□□□ -3.59
RPL39P62891 RNU6-574P-201ENST00000384265 107 ntBASIC-7.39□□□□□ -3.59
RPL39P62891 RNU4-14P-201ENST00000410858 122 ntBASIC-7.39□□□□□ -3.59
RPL39P62891 AL158147.1-201ENST00000443970 75 ntBASIC-7.39□□□□□ -3.59
RPL39P62891 RNY3P15-201ENST00000516297 97 ntBASIC-7.39□□□□□ -3.59
RPL39P62891 U2.14-201ENST00000615943 113 ntBASIC-7.39□□□□□ -3.59
RPL39P62891 RNU6-633P-201ENST00000362612 103 ntBASIC-7.4□□□□□ -3.59
RPL39P62891 RNU6-1211P-201ENST00000459179 105 ntBASIC-7.4□□□□□ -3.59
RPL39P62891 Y_RNA.661-201ENST00000516003 99 ntBASIC-7.4□□□□□ -3.59
RPL39P62891 RN7SKP298-201ENST00000515950 94 ntBASIC-7.41□□□□□ -3.6
RPL39P62891 AF246928.1-201ENST00000623768 87 ntBASIC-7.41□□□□□ -3.6
RPL39P62891 AC139792.2-201ENST00000624218 587 ntBASIC-7.41□□□□□ -3.6
RPL39P62891 RNU6-510P-201ENST00000391239 108 ntBASIC-7.42□□□□□ -3.6
RPL39P62891 Y_RNA.565-201ENST00000384719 101 ntBASIC-7.43□□□□□ -3.6
RPL39P62891 MIR548H4-201ENST00000408689 111 ntBASIC-7.43□□□□□ -3.6
RPL39P62891 SNORD127-201ENST00000458892 86 ntBASIC-7.43□□□□□ -3.6
RPL39P62891 U6atac.1-201ENST00000616025 117 ntBASIC-7.43□□□□□ -3.6
RPL39P62891 DNAJC19P2-201ENST00000593340 302 ntBASIC-7.45□□□□□ -3.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms