Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.55□□□□□ -2.66
RHBDL3P58872 RNA5SP461-201ENST00000516451 104 ntBASIC-1.55□□□□□ -2.66
RHBDL3P58872 MIR4441-201ENST00000582623 100 ntBASIC-1.55□□□□□ -2.66
RHBDL3P58872 SNORA26.4-201ENST00000391188 123 ntBASIC-1.56□□□□□ -2.66
RHBDL3P58872 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.56□□□□□ -2.66
RHBDL3P58872 RNU6-624P-201ENST00000363411 107 ntBASIC-1.57□□□□□ -2.66
RHBDL3P58872 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.57□□□□□ -2.66
RHBDL3P58872 MIR1285-2-201ENST00000408311 88 ntBASIC-1.57□□□□□ -2.66
RHBDL3P58872 AL035461.1-201ENST00000421490 332 ntBASIC-1.57□□□□□ -2.66
RHBDL3P58872 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.57□□□□□ -2.66
RHBDL3P58872 SNORD115-33-201ENST00000363723 82 ntBASIC-1.58□□□□□ -2.66
RHBDL3P58872 SNORD63.1-201ENST00000516178 80 ntBASIC-1.58□□□□□ -2.66
RHBDL3P58872 RNU6-518P-201ENST00000516056 96 ntBASIC-1.59□□□□□ -2.66
RHBDL3P58872 AC138207.3-201ENST00000585289 166 ntBASIC-1.59□□□□□ -2.66
RHBDL3P58872 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.6□□□□□ -2.67
RHBDL3P58872 MIR519A2-201ENST00000384990 87 ntBASIC-1.6□□□□□ -2.67
RHBDL3P58872 AL021921.1-201ENST00000442774 93 ntBASIC-1.6□□□□□ -2.67
RHBDL3P58872 MIR29B1-201ENST00000385015 81 ntBASIC-1.61□□□□□ -2.67
RHBDL3P58872 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.61□□□□□ -2.67
RHBDL3P58872 RNU6-557P-201ENST00000516842 110 ntBASIC-1.61□□□□□ -2.67
RHBDL3P58872 RNU6-919P-201ENST00000516731 104 ntBASIC-1.62□□□□□ -2.67
RHBDL3P58872 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.63□□□□□ -2.67
RHBDL3P58872 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.63□□□□□ -2.67
RHBDL3P58872 RNU6-219P-201ENST00000364728 107 ntBASIC-1.64□□□□□ -2.67
RHBDL3P58872 RNU6-402P-201ENST00000410678 103 ntBASIC-1.64□□□□□ -2.67
RHBDL3P58872 RNU4-61P-201ENST00000411243 107 ntBASIC-1.64□□□□□ -2.67
RHBDL3P58872 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.65□□□□□ -2.67
RHBDL3P58872 MIR6818-201ENST00000621576 65 ntBASIC-1.65□□□□□ -2.67
RHBDL3P58872 SNORD115-22-201ENST00000364456 82 ntBASIC-1.66□□□□□ -2.68
RHBDL3P58872 RNU6-303P-201ENST00000517091 106 ntBASIC-1.66□□□□□ -2.68
RHBDL3P58872 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.66□□□□□ -2.68
RHBDL3P58872 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.67□□□□□ -2.68
RHBDL3P58872 RNU6-215P-201ENST00000365169 102 ntBASIC-1.67□□□□□ -2.68
RHBDL3P58872 AL353691.2-201ENST00000443795 59 ntBASIC-1.67□□□□□ -2.68
RHBDL3P58872 MIR548AI-201ENST00000579940 88 ntBASIC-1.67□□□□□ -2.68
RHBDL3P58872 MIR548BB-201ENST00000626714 66 ntBASIC-1.67□□□□□ -2.68
RHBDL3P58872 RNU6-380P-201ENST00000410207 107 ntBASIC-1.68□□□□□ -2.68
RHBDL3P58872 RNU6-686P-201ENST00000364839 107 ntBASIC-1.69□□□□□ -2.68
RHBDL3P58872 HLA-S-202ENST00000425174 53 ntBASIC-1.69□□□□□ -2.68
RHBDL3P58872 RNU7-134P-201ENST00000458997 64 ntBASIC-1.69□□□□□ -2.68
RHBDL3P58872 RNU6-576P-201ENST00000390854 102 ntBASIC-1.7□□□□□ -2.68
RHBDL3P58872 RNU6-497P-201ENST00000365316 104 ntBASIC-1.71□□□□□ -2.68
RHBDL3P58872 RNU6-147P-201ENST00000383983 107 ntBASIC-1.71□□□□□ -2.68
RHBDL3P58872 MIR548C-201ENST00000384815 97 ntBASIC-1.71□□□□□ -2.68
RHBDL3P58872 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.71□□□□□ -2.68
RHBDL3P58872 SNORA63.4-201ENST00000362763 126 ntBASIC-1.72□□□□□ -2.68
RHBDL3P58872 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.72□□□□□ -2.68
RHBDL3P58872 RNU6-732P-201ENST00000516033 103 ntBASIC-1.72□□□□□ -2.68
RHBDL3P58872 MIR3675-201ENST00000583661 73 ntBASIC-1.72□□□□□ -2.68
RHBDL3P58872 SNORD20-201ENST00000384550 80 ntBASIC-1.73□□□□□ -2.69
RHBDL3P58872 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.73□□□□□ -2.69
RHBDL3P58872 RNU6-406P-201ENST00000516470 107 ntBASIC-1.73□□□□□ -2.69
RHBDL3P58872 RNU6-807P-201ENST00000516805 107 ntBASIC-1.73□□□□□ -2.69
RHBDL3P58872 MIR5591-201ENST00000578248 65 ntBASIC-1.73□□□□□ -2.69
RHBDL3P58872 RNY4P27-201ENST00000363341 96 ntBASIC-1.74□□□□□ -2.69
RHBDL3P58872 MIR507-201ENST00000385234 94 ntBASIC-1.74□□□□□ -2.69
RHBDL3P58872 RNU6-129P-201ENST00000391022 107 ntBASIC-1.74□□□□□ -2.69
RHBDL3P58872 MIR8485-201ENST00000401372 91 ntBASIC-1.74□□□□□ -2.69
RHBDL3P58872 RNU6-656P-201ENST00000516785 107 ntBASIC-1.74□□□□□ -2.69
RHBDL3P58872 RNU6-844P-201ENST00000517175 102 ntBASIC-1.74□□□□□ -2.69
RHBDL3P58872 RNA5SP26-201ENST00000362406 119 ntBASIC-1.75□□□□□ -2.69
RHBDL3P58872 RNU6-640P-201ENST00000363693 105 ntBASIC-1.75□□□□□ -2.69
RHBDL3P58872 RNU6-675P-201ENST00000384236 104 ntBASIC-1.75□□□□□ -2.69
RHBDL3P58872 RNU7-88P-201ENST00000458752 63 ntBASIC-1.75□□□□□ -2.69
RHBDL3P58872 RNU6-267P-201ENST00000516714 103 ntBASIC-1.75□□□□□ -2.69
RHBDL3P58872 MIR548AG1-201ENST00000579932 66 ntBASIC-1.75□□□□□ -2.69
RHBDL3P58872 MIR527-201ENST00000385244 85 ntBASIC-1.76□□□□□ -2.69
RHBDL3P58872 MIR1297-201ENST00000637311 77 ntBASIC-1.76□□□□□ -2.69
RHBDL3P58872 RNU6-246P-201ENST00000384702 107 ntBASIC-1.77□□□□□ -2.69
RHBDL3P58872 MIR4490-201ENST00000582647 84 ntBASIC-1.77□□□□□ -2.69
RHBDL3P58872 U2.7-201ENST00000619197 100 ntBASIC-1.77□□□□□ -2.69
RHBDL3P58872 AC006160.2-201ENST00000637708 154 ntBASIC-1.77□□□□□ -2.69
RHBDL3P58872 RNU6-226P-201ENST00000363778 107 ntBASIC-1.78□□□□□ -2.69
RHBDL3P58872 RNU6-645P-201ENST00000364649 106 ntBASIC-1.78□□□□□ -2.69
RHBDL3P58872 MIR488-201ENST00000365739 83 ntBASIC-1.78□□□□□ -2.69
RHBDL3P58872 SNORA8.1-201ENST00000384250 140 ntBASIC-1.78□□□□□ -2.69
RHBDL3P58872 U7.5-201ENST00000517224 61 ntBASIC-1.78□□□□□ -2.69
RHBDL3P58872 MIR4770-201ENST00000579149 58 ntBASIC-1.78□□□□□ -2.69
RHBDL3P58872 SNORD19-201ENST00000391191 68 ntBASIC-1.8□□□□□ -2.7
RHBDL3P58872 AP002795.1-201ENST00000534879 84 ntBASIC-1.8□□□□□ -2.7
RHBDL3P58872 MIR5683-201ENST00000636514 76 ntBASIC-1.8□□□□□ -2.7
RHBDL3P58872 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.81□□□□□ -2.7
RHBDL3P58872 AC074348.1-201ENST00000426503 132 ntBASIC-1.81□□□□□ -2.7
RHBDL3P58872 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.82□□□□□ -2.7
RHBDL3P58872 MIR889-201ENST00000401280 79 ntBASIC-1.82□□□□□ -2.7
RHBDL3P58872 RNU6-164P-201ENST00000364604 103 ntBASIC-1.83□□□□□ -2.7
RHBDL3P58872 MIR548Q-201ENST00000408404 100 ntBASIC-1.83□□□□□ -2.7
RHBDL3P58872 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.85□□□□□ -2.71
RHBDL3P58872 MIR1246-201ENST00000636535 73 ntBASIC-1.85□□□□□ -2.71
RHBDL3P58872 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.86□□□□□ -2.71
RHBDL3P58872 MIR4520-1-201ENST00000582609 70 ntBASIC-1.86□□□□□ -2.71
RHBDL3P58872 MIR6502-201ENST00000617296 76 ntBASIC-1.86□□□□□ -2.71
RHBDL3P58872 AC091912.2-201ENST00000624798 167 ntBASIC-1.86□□□□□ -2.71
RHBDL3P58872 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.87□□□□□ -2.71
RHBDL3P58872 IGLL4P-201ENST00000614590 133 ntBASIC-1.87□□□□□ -2.71
RHBDL3P58872 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.88□□□□□ -2.71
RHBDL3P58872 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.88□□□□□ -2.71
RHBDL3P58872 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.88□□□□□ -2.71
RHBDL3P58872 RNU6-478P-201ENST00000363904 110 ntBASIC-1.89□□□□□ -2.71
RHBDL3P58872 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 278.9 ms