Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR6739-201ENST00000622461 75 ntBASIC-1.15□□□□□ -2.59
LIMK1P53667 SNORA63.4-201ENST00000362763 126 ntBASIC-1.16□□□□□ -2.6
LIMK1P53667 RNU6-402P-201ENST00000410678 103 ntBASIC-1.16□□□□□ -2.6
LIMK1P53667 HLA-S-202ENST00000425174 53 ntBASIC-1.16□□□□□ -2.6
LIMK1P53667 RNU7-134P-201ENST00000458997 64 ntBASIC-1.16□□□□□ -2.6
LIMK1P53667 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.16□□□□□ -2.6
LIMK1P53667 RNU6-755P-201ENST00000364400 103 ntBASIC-1.17□□□□□ -2.6
LIMK1P53667 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.17□□□□□ -2.6
LIMK1P53667 snoU83B.1-201ENST00000517136 88 ntBASIC-1.17□□□□□ -2.6
LIMK1P53667 MIR4441-201ENST00000582623 100 ntBASIC-1.17□□□□□ -2.6
LIMK1P53667 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.17□□□□□ -2.6
LIMK1P53667 RNU6-924P-201ENST00000362926 108 ntBASIC-1.18□□□□□ -2.6
LIMK1P53667 MIR8485-201ENST00000401372 91 ntBASIC-1.19□□□□□ -2.6
LIMK1P53667 RNU6-518P-201ENST00000516056 96 ntBASIC-1.19□□□□□ -2.6
LIMK1P53667 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 RNU6-624P-201ENST00000363411 107 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 SNORD20-201ENST00000384550 80 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 RNU6-267P-201ENST00000516714 103 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 RNU6-919P-201ENST00000516731 104 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 MIR6818-201ENST00000621576 65 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 MIR548BB-201ENST00000626714 66 ntBASIC-1.2□□□□□ -2.6
LIMK1P53667 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.21□□□□□ -2.6
LIMK1P53667 RNU6-226P-201ENST00000363778 107 ntBASIC-1.22□□□□□ -2.6
LIMK1P53667 RNU6-219P-201ENST00000364728 107 ntBASIC-1.22□□□□□ -2.6
LIMK1P53667 MIR519A2-201ENST00000384990 87 ntBASIC-1.22□□□□□ -2.6
LIMK1P53667 AL021921.1-201ENST00000442774 93 ntBASIC-1.22□□□□□ -2.6
LIMK1P53667 RNU7-154P-201ENST00000516194 62 ntBASIC-1.22□□□□□ -2.6
LIMK1P53667 MIR5591-201ENST00000578248 65 ntBASIC-1.22□□□□□ -2.6
LIMK1P53667 MIR548AI-201ENST00000579940 88 ntBASIC-1.22□□□□□ -2.6
LIMK1P53667 RNU6-147P-201ENST00000383983 107 ntBASIC-1.23□□□□□ -2.61
LIMK1P53667 MIR548C-201ENST00000384815 97 ntBASIC-1.23□□□□□ -2.61
LIMK1P53667 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.23□□□□□ -2.61
LIMK1P53667 MIR6502-201ENST00000617296 76 ntBASIC-1.24□□□□□ -2.61
LIMK1P53667 SNORD115-33-201ENST00000363723 82 ntBASIC-1.25□□□□□ -2.61
LIMK1P53667 RNU6-215P-201ENST00000365169 102 ntBASIC-1.25□□□□□ -2.61
LIMK1P53667 RNA5SP180-201ENST00000516181 101 ntBASIC-1.25□□□□□ -2.61
LIMK1P53667 MIR3675-201ENST00000583661 73 ntBASIC-1.25□□□□□ -2.61
LIMK1P53667 RNU6-686P-201ENST00000364839 107 ntBASIC-1.26□□□□□ -2.61
LIMK1P53667 MIR527-201ENST00000385244 85 ntBASIC-1.26□□□□□ -2.61
LIMK1P53667 RNU6-303P-201ENST00000517091 106 ntBASIC-1.26□□□□□ -2.61
LIMK1P53667 MIR1246-201ENST00000636535 73 ntBASIC-1.26□□□□□ -2.61
LIMK1P53667 MIR488-201ENST00000365739 83 ntBASIC-1.27□□□□□ -2.61
LIMK1P53667 SNORA26.4-201ENST00000391188 123 ntBASIC-1.27□□□□□ -2.61
LIMK1P53667 RNU6-557P-201ENST00000516842 110 ntBASIC-1.27□□□□□ -2.61
LIMK1P53667 RNA5SP26-201ENST00000362406 119 ntBASIC-1.28□□□□□ -2.61
LIMK1P53667 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.28□□□□□ -2.61
LIMK1P53667 RNU4-61P-201ENST00000411243 107 ntBASIC-1.28□□□□□ -2.61
LIMK1P53667 RNU6-656P-201ENST00000516785 107 ntBASIC-1.28□□□□□ -2.61
LIMK1P53667 MIR4770-201ENST00000579149 58 ntBASIC-1.28□□□□□ -2.61
LIMK1P53667 RNU6-640P-201ENST00000363693 105 ntBASIC-1.29□□□□□ -2.62
LIMK1P53667 RNU6-645P-201ENST00000364649 106 ntBASIC-1.29□□□□□ -2.62
LIMK1P53667 RNU6-129P-201ENST00000391022 107 ntBASIC-1.29□□□□□ -2.62
LIMK1P53667 RNU6-380P-201ENST00000410207 107 ntBASIC-1.29□□□□□ -2.62
LIMK1P53667 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.29□□□□□ -2.62
LIMK1P53667 SNORD63.1-201ENST00000516178 80 ntBASIC-1.29□□□□□ -2.62
LIMK1P53667 MIR889-201ENST00000401280 79 ntBASIC-1.3□□□□□ -2.62
LIMK1P53667 RNU6-844P-201ENST00000517175 102 ntBASIC-1.3□□□□□ -2.62
LIMK1P53667 MIR548AG1-201ENST00000579932 66 ntBASIC-1.3□□□□□ -2.62
LIMK1P53667 MIR4520-1-201ENST00000582609 70 ntBASIC-1.3□□□□□ -2.62
LIMK1P53667 AC006160.2-201ENST00000637708 154 ntBASIC-1.3□□□□□ -2.62
LIMK1P53667 IGLL4P-201ENST00000614590 133 ntBASIC-1.31□□□□□ -2.62
LIMK1P53667 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.31□□□□□ -2.62
LIMK1P53667 RNU6-44P-201ENST00000384045 107 ntBASIC-1.32□□□□□ -2.62
LIMK1P53667 SNORA8.1-201ENST00000384250 140 ntBASIC-1.32□□□□□ -2.62
LIMK1P53667 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.33□□□□□ -2.62
LIMK1P53667 RNU6-330P-201ENST00000363015 107 ntBASIC-1.33□□□□□ -2.62
LIMK1P53667 RNY4P27-201ENST00000363341 96 ntBASIC-1.33□□□□□ -2.62
LIMK1P53667 SNORD115-22-201ENST00000364456 82 ntBASIC-1.33□□□□□ -2.62
LIMK1P53667 RNU6-576P-201ENST00000390854 102 ntBASIC-1.33□□□□□ -2.62
LIMK1P53667 U2.7-201ENST00000619197 100 ntBASIC-1.33□□□□□ -2.62
LIMK1P53667 SNORD45.1-201ENST00000363181 77 ntBASIC-1.34□□□□□ -2.62
LIMK1P53667 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.34□□□□□ -2.62
LIMK1P53667 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.34□□□□□ -2.62
LIMK1P53667 AC091912.2-201ENST00000624798 167 ntBASIC-1.34□□□□□ -2.62
LIMK1P53667 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.35□□□□□ -2.63
LIMK1P53667 RNU6-497P-201ENST00000365316 104 ntBASIC-1.35□□□□□ -2.63
LIMK1P53667 RNU6-406P-201ENST00000516470 107 ntBASIC-1.35□□□□□ -2.63
LIMK1P53667 RNU6-807P-201ENST00000516805 107 ntBASIC-1.35□□□□□ -2.63
LIMK1P53667 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.36□□□□□ -2.63
LIMK1P53667 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.36□□□□□ -2.63
LIMK1P53667 RNU6-168P-201ENST00000516189 101 ntBASIC-1.36□□□□□ -2.63
LIMK1P53667 RNU6-478P-201ENST00000363904 110 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 RNY1P1-201ENST00000364372 112 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 RNU6-164P-201ENST00000364604 103 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 RNU6-675P-201ENST00000384236 104 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 RNU6-246P-201ENST00000384702 107 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 RNA5SP86-201ENST00000390869 98 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 AL353691.2-201ENST00000443795 59 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 MIR4484-201ENST00000582855 83 ntBASIC-1.37□□□□□ -2.63
LIMK1P53667 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.38□□□□□ -2.63
LIMK1P53667 RNU6-604P-201ENST00000390917 100 ntBASIC-1.38□□□□□ -2.63
LIMK1P53667 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.38□□□□□ -2.63
LIMK1P53667 MIR1297-201ENST00000637311 77 ntBASIC-1.38□□□□□ -2.63
LIMK1P53667 RNU6-540P-201ENST00000384622 101 ntBASIC-1.39□□□□□ -2.63
LIMK1P53667 AC074348.1-201ENST00000426503 132 ntBASIC-1.39□□□□□ -2.63
LIMK1P53667 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms