Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR4324-201ENST00000584846 72 ntBASIC-0.78□□□□□ -2.53
LHX1P48742 U4.4-201ENST00000620626 117 ntBASIC-0.78□□□□□ -2.53
LHX1P48742 MIR5683-201ENST00000636514 76 ntBASIC-0.78□□□□□ -2.53
LHX1P48742 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 RNU6-640P-201ENST00000363693 105 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 RNU6-32P-201ENST00000383948 107 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 RNU6-458P-201ENST00000384179 107 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 RNU6-13P-201ENST00000384248 107 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 RNU6-12P-201ENST00000384604 107 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 RNU6-41P-201ENST00000384741 107 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 MIR507-201ENST00000385234 94 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 MIR527-201ENST00000385244 85 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 RNU6-604P-201ENST00000390917 100 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 MIR889-201ENST00000401280 79 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 AC090616.4-201ENST00000448026 115 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 U6.58-201ENST00000613107 107 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 AC091912.2-201ENST00000624798 167 ntBASIC-0.79□□□□□ -2.54
LHX1P48742 SNORA63.4-201ENST00000362763 126 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 RNU6-164P-201ENST00000364604 103 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 RNU6-686P-201ENST00000364839 107 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 RNU6-675P-201ENST00000384236 104 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 SNORA8.1-201ENST00000384250 140 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 MIR6502-201ENST00000617296 76 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 MIR6874-201ENST00000635894 71 ntBASIC-0.8□□□□□ -2.54
LHX1P48742 RNU6-598P-201ENST00000364017 105 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 RNU6-215P-201ENST00000365169 102 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 RNU6-147P-201ENST00000383983 107 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 SNORD20-201ENST00000384550 80 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 MIR520D-201ENST00000385002 87 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 RNU4-61P-201ENST00000411243 107 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 RPL35AP4-201ENST00000412007 102 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 RNU6-758P-201ENST00000516292 89 ntBASIC-0.81□□□□□ -2.54
LHX1P48742 RNU6-608P-201ENST00000383927 104 ntBASIC-0.82□□□□□ -2.54
LHX1P48742 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.82□□□□□ -2.54
LHX1P48742 RNU6-576P-201ENST00000390854 102 ntBASIC-0.82□□□□□ -2.54
LHX1P48742 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.82□□□□□ -2.54
LHX1P48742 SNORD57-201ENST00000448188 72 ntBASIC-0.82□□□□□ -2.54
LHX1P48742 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.82□□□□□ -2.54
LHX1P48742 AC006160.2-201ENST00000637708 154 ntBASIC-0.82□□□□□ -2.54
LHX1P48742 SNORD45.1-201ENST00000363181 77 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 RNU6-698P-201ENST00000363523 107 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 RNU6-34P-201ENST00000364874 107 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 MIR548C-201ENST00000384815 97 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 RNU6-696P-201ENST00000390834 107 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 RNU6-129P-201ENST00000391022 107 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 RNU6-919P-201ENST00000516731 104 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 MIR3115-201ENST00000577915 68 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 MIR548V-201ENST00000584165 80 ntBASIC-0.83□□□□□ -2.54
LHX1P48742 MIR1265-201ENST00000408444 86 ntBASIC-0.84□□□□□ -2.54
LHX1P48742 RNU6-789P-201ENST00000517105 102 ntBASIC-0.84□□□□□ -2.54
LHX1P48742 MIR4490-201ENST00000582647 84 ntBASIC-0.84□□□□□ -2.54
LHX1P48742 MIR4484-201ENST00000582855 83 ntBASIC-0.84□□□□□ -2.54
LHX1P48742 AC138207.3-201ENST00000585289 166 ntBASIC-0.84□□□□□ -2.54
LHX1P48742 MIR6738-201ENST00000619620 64 ntBASIC-0.84□□□□□ -2.54
LHX1P48742 RNU6-168P-201ENST00000516189 101 ntBASIC-0.85□□□□□ -2.55
LHX1P48742 RNU6-844P-201ENST00000517175 102 ntBASIC-0.85□□□□□ -2.55
LHX1P48742 MIR664A-201ENST00000626086 82 ntBASIC-0.85□□□□□ -2.55
LHX1P48742 SNORD95.1-201ENST00000364099 68 ntBASIC-0.86□□□□□ -2.55
LHX1P48742 RNA5SP368-201ENST00000364298 116 ntBASIC-0.86□□□□□ -2.55
LHX1P48742 SNORD113-2-201ENST00000391082 72 ntBASIC-0.86□□□□□ -2.55
LHX1P48742 RNU6-630P-201ENST00000391258 106 ntBASIC-0.86□□□□□ -2.55
LHX1P48742 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.86□□□□□ -2.55
LHX1P48742 RNU6-706P-201ENST00000517229 104 ntBASIC-0.86□□□□□ -2.55
LHX1P48742 U2.18-201ENST00000622185 84 ntBASIC-0.86□□□□□ -2.55
LHX1P48742 RNU6-79P-201ENST00000362511 107 ntBASIC-0.87□□□□□ -2.55
LHX1P48742 SNORD113.1-201ENST00000363280 73 ntBASIC-0.87□□□□□ -2.55
LHX1P48742 SNORA41B-201ENST00000384785 128 ntBASIC-0.87□□□□□ -2.55
LHX1P48742 MIR548Q-201ENST00000408404 100 ntBASIC-0.87□□□□□ -2.55
LHX1P48742 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 SNORD45A-201ENST00000384512 84 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 SNORD116-16-201ENST00000384533 92 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 MIR630-201ENST00000384957 97 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 RNU6-406P-201ENST00000516470 107 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 MIR1297-201ENST00000637311 77 ntBASIC-0.88□□□□□ -2.55
LHX1P48742 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.89□□□□□ -2.55
LHX1P48742 RNU6-44P-201ENST00000384045 107 ntBASIC-0.89□□□□□ -2.55
LHX1P48742 RNU6-49P-201ENST00000384256 107 ntBASIC-0.89□□□□□ -2.55
LHX1P48742 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
LHX1P48742 RNU6-258P-201ENST00000390884 101 ntBASIC-0.89□□□□□ -2.55
LHX1P48742 MIR5591-201ENST00000578248 65 ntBASIC-0.89□□□□□ -2.55
LHX1P48742 MIR4520-1-201ENST00000582609 70 ntBASIC-0.89□□□□□ -2.55
LHX1P48742 RNU6-315P-201ENST00000362666 107 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 RNA5SP215-201ENST00000363440 122 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 RNA5SP192-201ENST00000364404 120 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 RNU6-979P-201ENST00000383896 107 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 SNORD116-24-201ENST00000384549 92 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 RNA5SP25-201ENST00000410815 110 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 MIR3170-201ENST00000582699 77 ntBASIC-0.9□□□□□ -2.55
LHX1P48742 SNORD1B-201ENST00000363091 84 ntBASIC-0.91□□□□□ -2.56
LHX1P48742 RNU6-10P-201ENST00000384036 107 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms