Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 MIR196A1-201ENST00000388006 70 ntBASIC-0.67□□□□□ -2.52
TNFRSF4P43489 RNU6-721P-201ENST00000410155 105 ntBASIC-0.67□□□□□ -2.52
TNFRSF4P43489 RNU6-518P-201ENST00000516056 96 ntBASIC-0.67□□□□□ -2.52
TNFRSF4P43489 MIR4723-201ENST00000585070 81 ntBASIC-0.67□□□□□ -2.52
TNFRSF4P43489 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.68□□□□□ -2.52
TNFRSF4P43489 RNU6-330P-201ENST00000363015 107 ntBASIC-0.68□□□□□ -2.52
TNFRSF4P43489 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.68□□□□□ -2.52
TNFRSF4P43489 MIR517B-201ENST00000385102 67 ntBASIC-0.68□□□□□ -2.52
TNFRSF4P43489 MIR4484-201ENST00000582855 83 ntBASIC-0.68□□□□□ -2.52
TNFRSF4P43489 MIR548C-201ENST00000384815 97 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 SNORD83B-201ENST00000386745 93 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 RNU7-154P-201ENST00000516194 62 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 RNU6-807P-201ENST00000516805 107 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 RNU6-881P-201ENST00000516813 102 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.69□□□□□ -2.52
TNFRSF4P43489 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.7□□□□□ -2.52
TNFRSF4P43489 RNU6-645P-201ENST00000364649 106 ntBASIC-0.7□□□□□ -2.52
TNFRSF4P43489 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.7□□□□□ -2.52
TNFRSF4P43489 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.7□□□□□ -2.52
TNFRSF4P43489 RNU6-656P-201ENST00000516785 107 ntBASIC-0.7□□□□□ -2.52
TNFRSF4P43489 MIR5588-201ENST00000581890 63 ntBASIC-0.7□□□□□ -2.52
TNFRSF4P43489 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.71□□□□□ -2.52
TNFRSF4P43489 RNU6-604P-201ENST00000390917 100 ntBASIC-0.71□□□□□ -2.52
TNFRSF4P43489 AC074348.1-201ENST00000426503 132 ntBASIC-0.71□□□□□ -2.52
TNFRSF4P43489 AL021921.1-201ENST00000442774 93 ntBASIC-0.71□□□□□ -2.52
TNFRSF4P43489 MIR4464-201ENST00000580818 92 ntBASIC-0.71□□□□□ -2.52
TNFRSF4P43489 AL445584.3-201ENST00000617173 78 ntBASIC-0.71□□□□□ -2.52
TNFRSF4P43489 MIR6888-201ENST00000621977 67 ntBASIC-0.71□□□□□ -2.52
TNFRSF4P43489 MIR494-201ENST00000349529 81 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 MIR519A2-201ENST00000384990 87 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 MIR378F-201ENST00000578143 78 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 MIR3165-201ENST00000579874 75 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 MIR1297-201ENST00000637311 77 ntBASIC-0.72□□□□□ -2.52
TNFRSF4P43489 SNORD45.1-201ENST00000363181 77 ntBASIC-0.73□□□□□ -2.53
TNFRSF4P43489 RNA5SP192-201ENST00000364404 120 ntBASIC-0.74□□□□□ -2.53
TNFRSF4P43489 RNU6-294P-201ENST00000364999 102 ntBASIC-0.74□□□□□ -2.53
TNFRSF4P43489 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.74□□□□□ -2.53
TNFRSF4P43489 RNU6-979P-201ENST00000383896 107 ntBASIC-0.74□□□□□ -2.53
TNFRSF4P43489 RNU6-315P-201ENST00000362666 107 ntBASIC-0.75□□□□□ -2.53
TNFRSF4P43489 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.75□□□□□ -2.53
TNFRSF4P43489 U2.7-201ENST00000619197 100 ntBASIC-0.75□□□□□ -2.53
TNFRSF4P43489 RNU6-924P-201ENST00000362926 108 ntBASIC-0.76□□□□□ -2.53
TNFRSF4P43489 RNU6-242P-201ENST00000384359 107 ntBASIC-0.76□□□□□ -2.53
TNFRSF4P43489 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
TNFRSF4P43489 SNORD114-17-201ENST00000364699 75 ntBASIC-0.77□□□□□ -2.53
TNFRSF4P43489 RNU6-24P-201ENST00000384440 107 ntBASIC-0.77□□□□□ -2.53
TNFRSF4P43489 MIR450A2-201ENST00000385022 100 ntBASIC-0.77□□□□□ -2.53
TNFRSF4P43489 RNU6-982P-201ENST00000516216 102 ntBASIC-0.77□□□□□ -2.53
TNFRSF4P43489 MIR5582-201ENST00000579697 68 ntBASIC-0.77□□□□□ -2.53
TNFRSF4P43489 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.78□□□□□ -2.53
TNFRSF4P43489 RNU7-171P-201ENST00000459581 62 ntBASIC-0.78□□□□□ -2.53
TNFRSF4P43489 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.78□□□□□ -2.53
TNFRSF4P43489 MIR3115-201ENST00000577915 68 ntBASIC-0.79□□□□□ -2.54
TNFRSF4P43489 SNORD114-25-201ENST00000363742 72 ntBASIC-0.8□□□□□ -2.54
TNFRSF4P43489 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.8□□□□□ -2.54
TNFRSF4P43489 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.8□□□□□ -2.54
TNFRSF4P43489 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.8□□□□□ -2.54
TNFRSF4P43489 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.8□□□□□ -2.54
TNFRSF4P43489 MIR365A-201ENST00000362260 87 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 SNORD114-3-201ENST00000364969 75 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 MTND4LP1-201ENST00000446263 157 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 MIR4712-201ENST00000583750 82 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 MIR8053-201ENST00000613344 75 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 U4.2-201ENST00000618561 85 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 MIR1245B-201ENST00000636115 69 ntBASIC-0.81□□□□□ -2.54
TNFRSF4P43489 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.82□□□□□ -2.54
TNFRSF4P43489 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.82□□□□□ -2.54
TNFRSF4P43489 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.82□□□□□ -2.54
TNFRSF4P43489 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.82□□□□□ -2.54
TNFRSF4P43489 RNA5SP461-201ENST00000516451 104 ntBASIC-0.82□□□□□ -2.54
TNFRSF4P43489 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.82□□□□□ -2.54
TNFRSF4P43489 MIR664A-201ENST00000626086 82 ntBASIC-0.83□□□□□ -2.54
TNFRSF4P43489 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.84□□□□□ -2.54
TNFRSF4P43489 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.84□□□□□ -2.54
TNFRSF4P43489 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
TNFRSF4P43489 MIR1207-201ENST00000408249 87 ntBASIC-0.84□□□□□ -2.54
TNFRSF4P43489 MIR1285-2-201ENST00000408311 88 ntBASIC-0.84□□□□□ -2.54
TNFRSF4P43489 RNU6-668P-201ENST00000364180 107 ntBASIC-0.85□□□□□ -2.55
TNFRSF4P43489 SNORD115-22-201ENST00000364456 82 ntBASIC-0.85□□□□□ -2.55
TNFRSF4P43489 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.85□□□□□ -2.55
TNFRSF4P43489 SCARNA18B-201ENST00000458806 135 ntBASIC-0.85□□□□□ -2.55
TNFRSF4P43489 RNU7-174P-201ENST00000516248 59 ntBASIC-0.85□□□□□ -2.55
TNFRSF4P43489 MIR548V-201ENST00000584165 80 ntBASIC-0.85□□□□□ -2.55
TNFRSF4P43489 SNORD45A-201ENST00000384512 84 ntBASIC-0.86□□□□□ -2.55
TNFRSF4P43489 RNU7-88P-201ENST00000458752 63 ntBASIC-0.86□□□□□ -2.55
TNFRSF4P43489 MIR548AG1-201ENST00000579932 66 ntBASIC-0.86□□□□□ -2.55
TNFRSF4P43489 MIR4441-201ENST00000582623 100 ntBASIC-0.86□□□□□ -2.55
TNFRSF4P43489 SNORD113.1-201ENST00000363280 73 ntBASIC-0.87□□□□□ -2.55
TNFRSF4P43489 RNU6-431P-201ENST00000383874 107 ntBASIC-0.87□□□□□ -2.55
TNFRSF4P43489 RNU6-820P-201ENST00000384273 107 ntBASIC-0.87□□□□□ -2.55
TNFRSF4P43489 SNORD64-201ENST00000386683 67 ntBASIC-0.87□□□□□ -2.55
TNFRSF4P43489 RNA5SP180-201ENST00000516181 101 ntBASIC-0.87□□□□□ -2.55
TNFRSF4P43489 MIR147A-201ENST00000385079 72 ntBASIC-0.88□□□□□ -2.55
TNFRSF4P43489 SNORA26.4-201ENST00000391188 123 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms