Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU6-219P-201ENST00000364728 107 ntBASIC-1.27□□□□□ -2.61
BDNFP23560 U7.5-201ENST00000517224 61 ntBASIC-1.27□□□□□ -2.61
BDNFP23560 MIR4306-201ENST00000583390 91 ntBASIC-1.27□□□□□ -2.61
BDNFP23560 MALAT1.1-201ENST00000618249 95 ntBASIC-1.27□□□□□ -2.61
BDNFP23560 RNU6-497P-201ENST00000365316 104 ntBASIC-1.28□□□□□ -2.61
BDNFP23560 RNU6-576P-201ENST00000390854 102 ntBASIC-1.28□□□□□ -2.61
BDNFP23560 MIR3115-201ENST00000577915 68 ntBASIC-1.28□□□□□ -2.61
BDNFP23560 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.29□□□□□ -2.62
BDNFP23560 RNU6-686P-201ENST00000364839 107 ntBASIC-1.29□□□□□ -2.62
BDNFP23560 MIR548C-201ENST00000384815 97 ntBASIC-1.29□□□□□ -2.62
BDNFP23560 MT-TR-201ENST00000387439 65 ntBASIC-1.29□□□□□ -2.62
BDNFP23560 RNU7-88P-201ENST00000458752 63 ntBASIC-1.29□□□□□ -2.62
BDNFP23560 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.3□□□□□ -2.62
BDNFP23560 RNY4P18-201ENST00000391107 89 ntBASIC-1.3□□□□□ -2.62
BDNFP23560 RNU6-402P-201ENST00000410678 103 ntBASIC-1.3□□□□□ -2.62
BDNFP23560 AC074348.1-201ENST00000426503 132 ntBASIC-1.3□□□□□ -2.62
BDNFP23560 MIR4490-201ENST00000582647 84 ntBASIC-1.3□□□□□ -2.62
BDNFP23560 MIR548BB-201ENST00000626714 66 ntBASIC-1.3□□□□□ -2.62
BDNFP23560 RNA5SP26-201ENST00000362406 119 ntBASIC-1.31□□□□□ -2.62
BDNFP23560 RNU6-330P-201ENST00000363015 107 ntBASIC-1.31□□□□□ -2.62
BDNFP23560 SNORA8.1-201ENST00000384250 140 ntBASIC-1.31□□□□□ -2.62
BDNFP23560 MIR507-201ENST00000385234 94 ntBASIC-1.31□□□□□ -2.62
BDNFP23560 SNORD19-201ENST00000391191 68 ntBASIC-1.31□□□□□ -2.62
BDNFP23560 MIR5683-201ENST00000636514 76 ntBASIC-1.31□□□□□ -2.62
BDNFP23560 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 RNU7-174P-201ENST00000516248 59 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 RNA5SP461-201ENST00000516451 104 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 RNU6-267P-201ENST00000516714 103 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 U4.2-201ENST00000618561 85 ntBASIC-1.32□□□□□ -2.62
BDNFP23560 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.33□□□□□ -2.62
BDNFP23560 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.33□□□□□ -2.62
BDNFP23560 RNU7-134P-201ENST00000458997 64 ntBASIC-1.33□□□□□ -2.62
BDNFP23560 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.33□□□□□ -2.62
BDNFP23560 RNU6-755P-201ENST00000364400 103 ntBASIC-1.34□□□□□ -2.62
BDNFP23560 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.34□□□□□ -2.62
BDNFP23560 MIR527-201ENST00000385244 85 ntBASIC-1.34□□□□□ -2.62
BDNFP23560 RNU6-604P-201ENST00000390917 100 ntBASIC-1.34□□□□□ -2.62
BDNFP23560 RNU6-129P-201ENST00000391022 107 ntBASIC-1.34□□□□□ -2.62
BDNFP23560 RNU2-51P-201ENST00000410708 197 ntBASIC-1.34□□□□□ -2.62
BDNFP23560 AP002795.1-201ENST00000534879 84 ntBASIC-1.34□□□□□ -2.62
BDNFP23560 MIR365A-201ENST00000362260 87 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 SNORD45.1-201ENST00000363181 77 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 RNU6-458P-201ENST00000384179 107 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 U6.58-201ENST00000613107 107 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 MIR1297-201ENST00000637311 77 ntBASIC-1.35□□□□□ -2.63
BDNFP23560 MIR429-201ENST00000362106 83 ntBASIC-1.36□□□□□ -2.63
BDNFP23560 RNU6-478P-201ENST00000363904 110 ntBASIC-1.36□□□□□ -2.63
BDNFP23560 MIR3910-1-201ENST00000580936 111 ntBASIC-1.36□□□□□ -2.63
BDNFP23560 RNU6-164P-201ENST00000364604 103 ntBASIC-1.37□□□□□ -2.63
BDNFP23560 SNORD114-3-201ENST00000364969 75 ntBASIC-1.37□□□□□ -2.63
BDNFP23560 RNU6-675P-201ENST00000384236 104 ntBASIC-1.37□□□□□ -2.63
BDNFP23560 RNU6-982P-201ENST00000516216 102 ntBASIC-1.37□□□□□ -2.63
BDNFP23560 AC138207.3-201ENST00000585289 166 ntBASIC-1.37□□□□□ -2.63
BDNFP23560 RNU6-698P-201ENST00000363523 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-34P-201ENST00000364874 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-32P-201ENST00000383948 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-13P-201ENST00000384248 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-12P-201ENST00000384604 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-41P-201ENST00000384741 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-696P-201ENST00000390834 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-587P-201ENST00000391282 106 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 MIR1285-2-201ENST00000408311 88 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 RNU6-380P-201ENST00000410207 107 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 AC006160.2-201ENST00000637708 154 ntBASIC-1.38□□□□□ -2.63
BDNFP23560 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.39□□□□□ -2.63
BDNFP23560 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.39□□□□□ -2.63
BDNFP23560 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.39□□□□□ -2.63
BDNFP23560 SNORD113-1-201ENST00000365321 69 ntBASIC-1.39□□□□□ -2.63
BDNFP23560 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.39□□□□□ -2.63
BDNFP23560 MIR548Q-201ENST00000408404 100 ntBASIC-1.39□□□□□ -2.63
BDNFP23560 MTND4LP1-201ENST00000446263 157 ntBASIC-1.39□□□□□ -2.63
BDNFP23560 MIR488-201ENST00000365739 83 ntBASIC-1.4□□□□□ -2.63
BDNFP23560 MIR1207-201ENST00000408249 87 ntBASIC-1.4□□□□□ -2.63
BDNFP23560 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.4□□□□□ -2.63
BDNFP23560 RNU6-706P-201ENST00000517229 104 ntBASIC-1.4□□□□□ -2.63
BDNFP23560 RNU6-640P-201ENST00000363693 105 ntBASIC-1.41□□□□□ -2.64
BDNFP23560 RNU6-844P-201ENST00000517175 102 ntBASIC-1.41□□□□□ -2.64
BDNFP23560 MIR4441-201ENST00000582623 100 ntBASIC-1.41□□□□□ -2.64
BDNFP23560 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.41□□□□□ -2.64
BDNFP23560 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.42□□□□□ -2.64
BDNFP23560 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
BDNFP23560 RNA5SP180-201ENST00000516181 101 ntBASIC-1.42□□□□□ -2.64
BDNFP23560 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.42□□□□□ -2.64
BDNFP23560 MIR8053-201ENST00000613344 75 ntBASIC-1.42□□□□□ -2.64
BDNFP23560 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.43□□□□□ -2.64
BDNFP23560 RNA5SP215-201ENST00000363440 122 ntBASIC-1.43□□□□□ -2.64
BDNFP23560 AC090616.4-201ENST00000448026 115 ntBASIC-1.43□□□□□ -2.64
BDNFP23560 MIR4484-201ENST00000582855 83 ntBASIC-1.43□□□□□ -2.64
BDNFP23560 MIR548V-201ENST00000584165 80 ntBASIC-1.43□□□□□ -2.64
BDNFP23560 U4.4-201ENST00000620626 117 ntBASIC-1.43□□□□□ -2.64
BDNFP23560 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
BDNFP23560 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.44□□□□□ -2.64
BDNFP23560 RPL35AP4-201ENST00000412007 102 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 275.4 ms