Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.6□□□□□ -2.67
COL6A3P12111 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 MIR519C-201ENST00000385053 87 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 RNA5SP449-201ENST00000516871 130 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 AC009094.1-201ENST00000564443 426 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 RNU6-259P-201ENST00000383999 107 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 SNORD60.1-201ENST00000362451 73 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 RNU4-40P-201ENST00000364351 143 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 DEFB108C-201ENST00000400154 252 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 MTATP6P25-201ENST00000574491 261 ntBASIC-1.61□□□□□ -2.67
COL6A3P12111 RNY3P2-201ENST00000362918 102 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 RNU6-460P-201ENST00000391158 108 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 MTND4P17-201ENST00000470444 350 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 AL359920.1-201ENST00000618332 176 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 SNORD116.2-201ENST00000391251 93 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 AC006362.1-201ENST00000567392 174 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 AC078883.4-201ENST00000623218 367 ntBASIC-1.62□□□□□ -2.67
COL6A3P12111 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 AL603755.1-201ENST00000619504 163 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 RNU6-330P-201ENST00000363015 107 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 RNU7-61P-201ENST00000515897 61 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 MIR3611-201ENST00000584484 83 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 SNORD113.1-201ENST00000363280 73 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 RNU6-742P-201ENST00000365289 107 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 SNORD127-201ENST00000458892 86 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 SNORD11.1-201ENST00000459482 85 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 MIR4679-2-201ENST00000578358 77 ntBASIC-1.63□□□□□ -2.67
COL6A3P12111 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.64□□□□□ -2.67
COL6A3P12111 SNORD116-29-201ENST00000384516 83 ntBASIC-1.64□□□□□ -2.67
COL6A3P12111 SCARNA23-201ENST00000516060 130 ntBASIC-1.64□□□□□ -2.67
COL6A3P12111 MIR4317-201ENST00000637586 65 ntBASIC-1.64□□□□□ -2.67
COL6A3P12111 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.64□□□□□ -2.67
COL6A3P12111 RNU6-806P-201ENST00000365147 105 ntBASIC-1.64□□□□□ -2.67
COL6A3P12111 RNU6-823P-201ENST00000391042 103 ntBASIC-1.64□□□□□ -2.67
COL6A3P12111 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 RNY3P16-201ENST00000516338 101 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 AC109635.3-201ENST00000529536 185 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 SNORA63-201ENST00000363450 132 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 MTND5P22-201ENST00000458380 195 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 RNU6-239P-201ENST00000390990 99 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 RNU6-789P-201ENST00000517105 102 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 U6.104-201ENST00000637979 90 ntBASIC-1.65□□□□□ -2.67
COL6A3P12111 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.66□□□□□ -2.67
COL6A3P12111 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.66□□□□□ -2.67
COL6A3P12111 AC093729.1-201ENST00000513074 128 ntBASIC-1.66□□□□□ -2.67
COL6A3P12111 RNU6-795P-201ENST00000516323 103 ntBASIC-1.66□□□□□ -2.67
COL6A3P12111 AL035470.1-201ENST00000622571 220 ntBASIC-1.66□□□□□ -2.67
COL6A3P12111 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.66□□□□□ -2.68
COL6A3P12111 RNU6-557P-201ENST00000516842 110 ntBASIC-1.66□□□□□ -2.68
COL6A3P12111 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.66□□□□□ -2.68
COL6A3P12111 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 SNORA40B-201ENST00000385573 128 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
COL6A3P12111 RNU7-119P-201ENST00000459279 63 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.67□□□□□ -2.68
COL6A3P12111 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 RNU6-686P-201ENST00000364839 107 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 MIR1302-11-201ENST00000408051 138 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 MIR1302-9-201ENST00000408365 138 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 MIR1302-10-201ENST00000408734 138 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 RNU6-162P-201ENST00000516228 103 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 RNU6-277P-201ENST00000516272 106 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 RNU6-267P-201ENST00000516714 103 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 MIR1302-2-201ENST00000607096 138 ntBASIC-1.67□□□□□ -2.68
COL6A3P12111 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 SNORA8.1-201ENST00000384250 140 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 RNU6-196P-201ENST00000384315 107 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 MTND4LP32-201ENST00000636111 270 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 MIR1297-201ENST00000637311 77 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 MIR1252-201ENST00000408861 65 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 AP001318.4-201ENST00000616637 121 ntBASIC-1.68□□□□□ -2.68
COL6A3P12111 RNY4P14-201ENST00000363656 96 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 AL451105.1-201ENST00000450005 189 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU7-152P-201ENST00000458982 64 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 SNORD45A-201ENST00000384512 84 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU4-14P-201ENST00000410858 122 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU6-854P-201ENST00000364036 107 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 322.6 ms