Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MIR4801-201ENST00000582704 82 ntBASIC-4.06□□□□□ -3.06
TPM3P06753 Y_RNA.398-201ENST00000383952 99 ntBASIC-4.07□□□□□ -3.06
TPM3P06753 RNU6-804P-201ENST00000384286 107 ntBASIC-4.07□□□□□ -3.06
TPM3P06753 RNU6-982P-201ENST00000516216 102 ntBASIC-4.07□□□□□ -3.06
TPM3P06753 RNU6-1247P-201ENST00000516622 98 ntBASIC-4.07□□□□□ -3.06
TPM3P06753 RNU6-604P-201ENST00000390917 100 ntBASIC-4.08□□□□□ -3.06
TPM3P06753 Y_RNA.591-201ENST00000410228 104 ntBASIC-4.08□□□□□ -3.06
TPM3P06753 Y_RNA.8-201ENST00000362353 102 ntBASIC-4.09□□□□□ -3.06
TPM3P06753 SNORD116-16-201ENST00000384533 92 ntBASIC-4.09□□□□□ -3.06
TPM3P06753 Y_RNA.525-201ENST00000384570 113 ntBASIC-4.09□□□□□ -3.06
TPM3P06753 MIR568-201ENST00000385036 95 ntBASIC-4.09□□□□□ -3.06
TPM3P06753 RNU6-330P-201ENST00000363015 107 ntBASIC-4.11□□□□□ -3.07
TPM3P06753 MIR606-201ENST00000384851 96 ntBASIC-4.11□□□□□ -3.07
TPM3P06753 RNA5SP405-201ENST00000363059 114 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 RNU6-194P-201ENST00000363862 105 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 Y_RNA.190-201ENST00000363964 101 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 RNU6-1107P-201ENST00000364817 104 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 SNORA8.1-201ENST00000384250 140 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 Y_RNA.712-201ENST00000517011 92 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 AC013734.1-201ENST00000619329 111 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 U6.95-201ENST00000636931 70 ntBASIC-4.12□□□□□ -3.07
TPM3P06753 SNORA27.2-201ENST00000363365 126 ntBASIC-4.13□□□□□ -3.07
TPM3P06753 SNORD115-37-201ENST00000363768 82 ntBASIC-4.13□□□□□ -3.07
TPM3P06753 Y_RNA.211-201ENST00000364164 101 ntBASIC-4.13□□□□□ -3.07
TPM3P06753 RNU6-119P-201ENST00000364882 107 ntBASIC-4.13□□□□□ -3.07
TPM3P06753 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.13□□□□□ -3.07
TPM3P06753 RNU6-162P-201ENST00000516228 103 ntBASIC-4.13□□□□□ -3.07
TPM3P06753 U7.3-201ENST00000616123 62 ntBASIC-4.13□□□□□ -3.07
TPM3P06753 RNU6-1081P-201ENST00000384537 107 ntBASIC-4.14□□□□□ -3.07
TPM3P06753 SNORA40-201ENST00000388090 126 ntBASIC-4.14□□□□□ -3.07
TPM3P06753 SNORD113-2-201ENST00000391082 72 ntBASIC-4.14□□□□□ -3.07
TPM3P06753 RNU6-624P-201ENST00000363411 107 ntBASIC-4.15□□□□□ -3.07
TPM3P06753 MIR630-201ENST00000384957 97 ntBASIC-4.15□□□□□ -3.07
TPM3P06753 RNU6-303P-201ENST00000517091 106 ntBASIC-4.15□□□□□ -3.07
TPM3P06753 RNU6-995P-201ENST00000391244 107 ntBASIC-4.16□□□□□ -3.08
TPM3P06753 SNORD45.1-201ENST00000363181 77 ntBASIC-4.17□□□□□ -3.08
TPM3P06753 Y_RNA.107-201ENST00000363190 121 ntBASIC-4.17□□□□□ -3.08
TPM3P06753 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.17□□□□□ -3.08
TPM3P06753 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.17□□□□□ -3.08
TPM3P06753 MIR1207-201ENST00000408249 87 ntBASIC-4.18□□□□□ -3.08
TPM3P06753 RNU6-1064P-201ENST00000410626 104 ntBASIC-4.18□□□□□ -3.08
TPM3P06753 RNU6-182P-201ENST00000516970 105 ntBASIC-4.18□□□□□ -3.08
TPM3P06753 MIR3139-201ENST00000579145 76 ntBASIC-4.18□□□□□ -3.08
TPM3P06753 MTATP8P2-201ENST00000435212 202 ntBASIC-4.19□□□□□ -3.08
TPM3P06753 AC005520.4-201ENST00000604337 90 ntBASIC-4.19□□□□□ -3.08
TPM3P06753 SNORD1B-201ENST00000363091 84 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 RNA5SP215-201ENST00000363440 122 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 RNU6-200P-201ENST00000364743 107 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 Y_RNA.564-201ENST00000384708 106 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 MIR590-201ENST00000385008 97 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 MTND4LP1-201ENST00000446263 157 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 MTRNR2L9-201ENST00000622562 75 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 U6.97-201ENST00000636904 101 ntBASIC-4.2□□□□□ -3.08
TPM3P06753 Y_RNA.475-201ENST00000384345 101 ntBASIC-4.22□□□□□ -3.08
TPM3P06753 snoU13.10-201ENST00000459301 103 ntBASIC-4.22□□□□□ -3.08
TPM3P06753 MIR466-201ENST00000580653 84 ntBASIC-4.22□□□□□ -3.08
TPM3P06753 MIR548W-201ENST00000581970 74 ntBASIC-4.22□□□□□ -3.08
TPM3P06753 RNU6-738P-201ENST00000384531 106 ntBASIC-4.23□□□□□ -3.09
TPM3P06753 SNORD63.2-201ENST00000516303 64 ntBASIC-4.23□□□□□ -3.09
TPM3P06753 MIR4723-201ENST00000585070 81 ntBASIC-4.23□□□□□ -3.09
TPM3P06753 RNU6-633P-201ENST00000362612 103 ntBASIC-4.24□□□□□ -3.09
TPM3P06753 Y_RNA.93-201ENST00000363066 109 ntBASIC-4.24□□□□□ -3.09
TPM3P06753 MIR496-201ENST00000385226 102 ntBASIC-4.24□□□□□ -3.09
TPM3P06753 AC074348.1-201ENST00000426503 132 ntBASIC-4.24□□□□□ -3.09
TPM3P06753 AC004792.1-201ENST00000614523 137 ntBASIC-4.24□□□□□ -3.09
TPM3P06753 Y_RNA.193-201ENST00000363979 102 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 RNA5SP173-201ENST00000364857 136 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 SNORD115-31-201ENST00000365318 82 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 RNU6-257P-201ENST00000410238 98 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 RNU6-557P-201ENST00000516842 110 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 RNU7-151P-201ENST00000516930 53 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 MTND5P41-201ENST00000517498 206 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-4.25□□□□□ -3.09
TPM3P06753 RNU6-669P-201ENST00000365575 107 ntBASIC-4.26□□□□□ -3.09
TPM3P06753 Y_RNA.489-201ENST00000384410 101 ntBASIC-4.26□□□□□ -3.09
TPM3P06753 SNORA41B-201ENST00000384785 128 ntBASIC-4.27□□□□□ -3.09
TPM3P06753 VTRNA2-1-201ENST00000602301 127 ntBASIC-4.27□□□□□ -3.09
TPM3P06753 MIR1302-5-201ENST00000408164 150 ntBASIC-4.28□□□□□ -3.09
TPM3P06753 AC093729.1-201ENST00000513074 128 ntBASIC-4.28□□□□□ -3.09
TPM3P06753 SNORD18C-201ENST00000362704 69 ntBASIC-4.3□□□□□ -3.1
TPM3P06753 RNU6-668P-201ENST00000364180 107 ntBASIC-4.3□□□□□ -3.1
TPM3P06753 SNORD116-21-201ENST00000384507 92 ntBASIC-4.3□□□□□ -3.1
TPM3P06753 RNY4P18-201ENST00000391107 89 ntBASIC-4.3□□□□□ -3.1
TPM3P06753 Y_RNA.818-201ENST00000618813 71 ntBASIC-4.3□□□□□ -3.1
TPM3P06753 Y_RNA.501-201ENST00000384467 103 ntBASIC-4.31□□□□□ -3.1
TPM3P06753 RNU6-971P-201ENST00000516920 106 ntBASIC-4.31□□□□□ -3.1
TPM3P06753 MT-TM-201ENST00000387377 68 ntBASIC-4.32□□□□□ -3.1
TPM3P06753 RNY3P8-201ENST00000411366 126 ntBASIC-4.32□□□□□ -3.1
TPM3P06753 MIR4748-201ENST00000578076 82 ntBASIC-4.32□□□□□ -3.1
TPM3P06753 Y_RNA.71-201ENST00000362892 104 ntBASIC-4.33□□□□□ -3.1
TPM3P06753 RNU6-686P-201ENST00000364839 107 ntBASIC-4.34□□□□□ -3.1
TPM3P06753 RNU6-523P-201ENST00000516304 54 ntBASIC-4.34□□□□□ -3.1
TPM3P06753 RNU6-109P-201ENST00000516364 107 ntBASIC-4.34□□□□□ -3.1
TPM3P06753 RNU6-659P-201ENST00000516454 104 ntBASIC-4.34□□□□□ -3.1
TPM3P06753 RNU6-184P-201ENST00000516514 107 ntBASIC-4.34□□□□□ -3.1
TPM3P06753 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.35□□□□□ -3.11
TPM3P06753 MIR7978-201ENST00000636158 59 ntBASIC-4.35□□□□□ -3.11
TPM3P06753 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-4.35□□□□□ -3.11
TPM3P06753 MIR579-201ENST00000385221 98 ntBASIC-4.36□□□□□ -3.11
TPM3P06753 RNU6-129P-201ENST00000391022 107 ntBASIC-4.36□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms