Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR568-201ENST00000385036 95 ntBASIC-3.26□□□□□ -2.93
APOEP02649 snoU13.10-201ENST00000459301 103 ntBASIC-3.26□□□□□ -2.93
APOEP02649 RNU6-804P-201ENST00000384286 107 ntBASIC-3.27□□□□□ -2.93
APOEP02649 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.27□□□□□ -2.93
APOEP02649 MTCYBP9-201ENST00000431021 303 ntBASIC-3.27□□□□□ -2.93
APOEP02649 RNU7-107P-201ENST00000459121 61 ntBASIC-3.27□□□□□ -2.93
APOEP02649 RNU6-904P-201ENST00000516206 101 ntBASIC-3.27□□□□□ -2.93
APOEP02649 RNU6-574P-201ENST00000384265 107 ntBASIC-3.28□□□□□ -2.93
APOEP02649 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.28□□□□□ -2.93
APOEP02649 MIR1302-3-201ENST00000408128 138 ntBASIC-3.28□□□□□ -2.93
APOEP02649 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.28□□□□□ -2.93
APOEP02649 RNU6-426P-201ENST00000516464 97 ntBASIC-3.28□□□□□ -2.93
APOEP02649 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.28□□□□□ -2.93
APOEP02649 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.28□□□□□ -2.93
APOEP02649 RNU6-1094P-201ENST00000362416 104 ntBASIC-3.29□□□□□ -2.94
APOEP02649 MTND4LP9-201ENST00000427694 174 ntBASIC-3.29□□□□□ -2.94
APOEP02649 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.29□□□□□ -2.94
APOEP02649 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.3□□□□□ -2.94
APOEP02649 MIR606-201ENST00000384851 96 ntBASIC-3.3□□□□□ -2.94
APOEP02649 RNU7-61P-201ENST00000515897 61 ntBASIC-3.3□□□□□ -2.94
APOEP02649 MIR3170-201ENST00000582699 77 ntBASIC-3.3□□□□□ -2.94
APOEP02649 FTX_4.1-201ENST00000616291 147 ntBASIC-3.3□□□□□ -2.94
APOEP02649 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.31□□□□□ -2.94
APOEP02649 SNORD33.1-201ENST00000516213 88 ntBASIC-3.31□□□□□ -2.94
APOEP02649 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.32□□□□□ -2.94
APOEP02649 U4.4-201ENST00000620626 117 ntBASIC-3.32□□□□□ -2.94
APOEP02649 RNA5SP93-201ENST00000362525 114 ntBASIC-3.33□□□□□ -2.94
APOEP02649 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.33□□□□□ -2.94
APOEP02649 RNU6-698P-201ENST00000363523 107 ntBASIC-3.34□□□□□ -2.94
APOEP02649 RNU6-34P-201ENST00000364874 107 ntBASIC-3.34□□□□□ -2.94
APOEP02649 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.34□□□□□ -2.94
APOEP02649 Y_RNA.281-201ENST00000364774 94 ntBASIC-3.35□□□□□ -2.95
APOEP02649 RNU6-162P-201ENST00000516228 103 ntBASIC-3.35□□□□□ -2.95
APOEP02649 MIR3914-2-201ENST00000637339 95 ntBASIC-3.35□□□□□ -2.95
APOEP02649 MIR519C-201ENST00000385053 87 ntBASIC-3.36□□□□□ -2.95
APOEP02649 RNU6-982P-201ENST00000516216 102 ntBASIC-3.36□□□□□ -2.95
APOEP02649 RNU6-247P-201ENST00000362636 107 ntBASIC-3.38□□□□□ -2.95
APOEP02649 RNU6-330P-201ENST00000363015 107 ntBASIC-3.38□□□□□ -2.95
APOEP02649 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.38□□□□□ -2.95
APOEP02649 MIR548AA1-201ENST00000384971 97 ntBASIC-3.38□□□□□ -2.95
APOEP02649 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.38□□□□□ -2.95
APOEP02649 MIR3675-201ENST00000583661 73 ntBASIC-3.38□□□□□ -2.95
APOEP02649 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.39□□□□□ -2.95
APOEP02649 RNY4P9-201ENST00000363194 97 ntBASIC-3.39□□□□□ -2.95
APOEP02649 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.39□□□□□ -2.95
APOEP02649 RNU6-604P-201ENST00000390917 100 ntBASIC-3.39□□□□□ -2.95
APOEP02649 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.4□□□□□ -2.95
APOEP02649 MIR548V-201ENST00000584165 80 ntBASIC-3.4□□□□□ -2.95
APOEP02649 U7.3-201ENST00000616123 62 ntBASIC-3.4□□□□□ -2.95
APOEP02649 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.41□□□□□ -2.96
APOEP02649 SNORA40-201ENST00000388090 126 ntBASIC-3.42□□□□□ -2.96
APOEP02649 MTND5P41-201ENST00000517498 206 ntBASIC-3.42□□□□□ -2.96
APOEP02649 AC013734.1-201ENST00000619329 111 ntBASIC-3.42□□□□□ -2.96
APOEP02649 RNU6-230P-201ENST00000362457 104 ntBASIC-3.43□□□□□ -2.96
APOEP02649 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.43□□□□□ -2.96
APOEP02649 AC097484.2-201ENST00000509147 251 ntBASIC-3.43□□□□□ -2.96
APOEP02649 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.44□□□□□ -2.96
APOEP02649 RNU6-738P-201ENST00000384531 106 ntBASIC-3.44□□□□□ -2.96
APOEP02649 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.44□□□□□ -2.96
APOEP02649 RNU6-200P-201ENST00000364743 107 ntBASIC-3.45□□□□□ -2.96
APOEP02649 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.45□□□□□ -2.96
APOEP02649 SNORA8.1-201ENST00000384250 140 ntBASIC-3.45□□□□□ -2.96
APOEP02649 MIR630-201ENST00000384957 97 ntBASIC-3.45□□□□□ -2.96
APOEP02649 MIR590-201ENST00000385008 97 ntBASIC-3.45□□□□□ -2.96
APOEP02649 U6.95-201ENST00000636931 70 ntBASIC-3.45□□□□□ -2.96
APOEP02649 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.46□□□□□ -2.96
APOEP02649 AC004792.1-201ENST00000614523 137 ntBASIC-3.46□□□□□ -2.96
APOEP02649 U6.97-201ENST00000636904 101 ntBASIC-3.46□□□□□ -2.96
APOEP02649 SNORD45.1-201ENST00000363181 77 ntBASIC-3.47□□□□□ -2.96
APOEP02649 SNORD115-37-201ENST00000363768 82 ntBASIC-3.47□□□□□ -2.96
APOEP02649 SNORD113-2-201ENST00000391082 72 ntBASIC-3.47□□□□□ -2.96
APOEP02649 RNU6-257P-201ENST00000410238 98 ntBASIC-3.47□□□□□ -2.96
APOEP02649 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.48□□□□□ -2.97
APOEP02649 SNORD116-16-201ENST00000384533 92 ntBASIC-3.48□□□□□ -2.97
APOEP02649 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.48□□□□□ -2.97
APOEP02649 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.49□□□□□ -2.97
APOEP02649 RNU6-624P-201ENST00000363411 107 ntBASIC-3.5□□□□□ -2.97
APOEP02649 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.5□□□□□ -2.97
APOEP02649 RNU6-971P-201ENST00000516920 106 ntBASIC-3.5□□□□□ -2.97
APOEP02649 RNU6-303P-201ENST00000517091 106 ntBASIC-3.5□□□□□ -2.97
APOEP02649 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.51□□□□□ -2.97
APOEP02649 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.51□□□□□ -2.97
APOEP02649 SNORD1B-201ENST00000363091 84 ntBASIC-3.53□□□□□ -2.97
APOEP02649 RNU6-141P-201ENST00000410499 105 ntBASIC-3.53□□□□□ -2.97
APOEP02649 RNU6-109P-201ENST00000516364 107 ntBASIC-3.53□□□□□ -2.97
APOEP02649 RNU6-184P-201ENST00000516514 107 ntBASIC-3.53□□□□□ -2.97
APOEP02649 AC005520.4-201ENST00000604337 90 ntBASIC-3.53□□□□□ -2.97
APOEP02649 RNU6-995P-201ENST00000391244 107 ntBASIC-3.54□□□□□ -2.98
APOEP02649 SNORA27.2-201ENST00000363365 126 ntBASIC-3.55□□□□□ -2.98
APOEP02649 MIR4503-201ENST00000582187 83 ntBASIC-3.55□□□□□ -2.98
APOEP02649 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.55□□□□□ -2.98
APOEP02649 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.55□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms