Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR1236-201ENST00000408340 102 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 MIR5009-201ENST00000578736 100 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 MIR4484-201ENST00000582855 83 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 MIR3675-201ENST00000583661 73 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 MTND4P29-201ENST00000503122 1372 ntBASIC-1.11□□□□□ -2.59
COL1A1P02452 SNORD58C-201ENST00000365223 64 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 RNU6-520P-201ENST00000384717 104 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 RNY4P18-201ENST00000391107 89 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 MTATP8P1-201ENST00000467115 207 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 RNU6-68P-201ENST00000516576 104 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 MIR4439-201ENST00000583746 80 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 MIR429-201ENST00000362106 83 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 RNU6-681P-201ENST00000364012 104 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 MIR125B1-201ENST00000385236 88 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.12□□□□□ -2.59
COL1A1P02452 MIR4680-201ENST00000580906 66 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 MIR8062-201ENST00000621515 85 ntBASIC-1.12□□□□□ -2.59
COL1A1P02452 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.13□□□□□ -2.59
COL1A1P02452 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.13□□□□□ -2.59
COL1A1P02452 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.13□□□□□ -2.59
COL1A1P02452 SNORA8.1-201ENST00000384250 140 ntBASIC-1.13□□□□□ -2.59
COL1A1P02452 SNORD45A-201ENST00000384512 84 ntBASIC-1.13□□□□□ -2.59
COL1A1P02452 RNU6-887P-201ENST00000410660 100 ntBASIC-1.13□□□□□ -2.59
COL1A1P02452 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 RNU6-867P-201ENST00000364956 107 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 SNORD42.2-201ENST00000365570 69 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 MIR548N-201ENST00000408742 75 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 RNU6-109P-201ENST00000516364 107 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 RNU6-184P-201ENST00000516514 107 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 RNU6-537P-201ENST00000517277 103 ntBASIC-1.14□□□□□ -2.59
COL1A1P02452 SNORD113.1-201ENST00000363280 73 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 RNU6-810P-201ENST00000364001 107 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 RNU4-40P-201ENST00000364351 143 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
COL1A1P02452 RNU6-972P-201ENST00000391208 107 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 SNORA17.4-201ENST00000391287 132 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 RNU7-107P-201ENST00000459121 61 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 RNU6-635P-201ENST00000516651 102 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 SNORA81.3-201ENST00000517283 198 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 MIR4795-201ENST00000584182 89 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.15□□□□□ -2.59
COL1A1P02452 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 RNY1P1-201ENST00000364372 112 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 RNU6-828P-201ENST00000364876 107 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 SNORD60-201ENST00000383903 83 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 RNU6-800P-201ENST00000384473 103 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 SCARNA23-201ENST00000516060 130 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 U7.3-201ENST00000616123 62 ntBASIC-1.16□□□□□ -2.59
COL1A1P02452 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 RNU6-668P-201ENST00000364180 107 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 SNORA33.2-201ENST00000365413 134 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 MIR519C-201ENST00000385053 87 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 RNU6-554P-201ENST00000410466 106 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 RNU6-267P-201ENST00000516714 103 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 RNU6-988P-201ENST00000519081 107 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 U6atac.1-201ENST00000616025 117 ntBASIC-1.17□□□□□ -2.6
COL1A1P02452 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 RNU6-624P-201ENST00000363411 107 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 MIR590-201ENST00000385008 97 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 RNU6-772P-201ENST00000516042 105 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 MIR4679-2-201ENST00000578358 77 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 SNORD116-10-201ENST00000363791 102 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 RNU6-713P-201ENST00000384761 107 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 RNY4P25-201ENST00000459254 96 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 RNU6-904P-201ENST00000516206 101 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 SNORD33.1-201ENST00000516213 88 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 RNU6-111P-201ENST00000517179 105 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 AP001340.1-201ENST00000624405 217 ntBASIC-1.18□□□□□ -2.6
COL1A1P02452 AL157777.2-201ENST00000258070 137 ntBASIC-1.19□□□□□ -2.6
COL1A1P02452 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.19□□□□□ -2.6
COL1A1P02452 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms