Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.88□□□□□ -2.55
PDGFBP01127 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
PDGFBP01127 MIR4464-201ENST00000580818 92 ntBASIC-0.89□□□□□ -2.55
PDGFBP01127 MIR4484-201ENST00000582855 83 ntBASIC-0.89□□□□□ -2.55
PDGFBP01127 MIR6739-201ENST00000622461 75 ntBASIC-0.89□□□□□ -2.55
PDGFBP01127 RNU6-624P-201ENST00000363411 107 ntBASIC-0.9□□□□□ -2.55
PDGFBP01127 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.9□□□□□ -2.55
PDGFBP01127 SNORD114-3-201ENST00000364969 75 ntBASIC-0.9□□□□□ -2.55
PDGFBP01127 MIR519A2-201ENST00000384990 87 ntBASIC-0.9□□□□□ -2.55
PDGFBP01127 RNU6-406P-201ENST00000516470 107 ntBASIC-0.9□□□□□ -2.55
PDGFBP01127 RNU6-844P-201ENST00000517175 102 ntBASIC-0.9□□□□□ -2.55
PDGFBP01127 AL445584.3-201ENST00000617173 78 ntBASIC-0.9□□□□□ -2.55
PDGFBP01127 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.91□□□□□ -2.56
PDGFBP01127 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.91□□□□□ -2.56
PDGFBP01127 RNU6-24P-201ENST00000384440 107 ntBASIC-0.91□□□□□ -2.56
PDGFBP01127 MIR1285-2-201ENST00000408311 88 ntBASIC-0.91□□□□□ -2.56
PDGFBP01127 RNY4P30-201ENST00000410216 95 ntBASIC-0.91□□□□□ -2.56
PDGFBP01127 RNU6-168P-201ENST00000516189 101 ntBASIC-0.91□□□□□ -2.56
PDGFBP01127 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.92□□□□□ -2.56
PDGFBP01127 RNA5SP89-201ENST00000410300 108 ntBASIC-0.92□□□□□ -2.56
PDGFBP01127 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.92□□□□□ -2.56
PDGFBP01127 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.92□□□□□ -2.56
PDGFBP01127 IGLL4P-201ENST00000614590 133 ntBASIC-0.92□□□□□ -2.56
PDGFBP01127 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.92□□□□□ -2.56
PDGFBP01127 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.93□□□□□ -2.56
PDGFBP01127 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.93□□□□□ -2.56
PDGFBP01127 MIR3675-201ENST00000583661 73 ntBASIC-0.93□□□□□ -2.56
PDGFBP01127 RNU6-645P-201ENST00000364649 106 ntBASIC-0.94□□□□□ -2.56
PDGFBP01127 RNU6-686P-201ENST00000364839 107 ntBASIC-0.94□□□□□ -2.56
PDGFBP01127 RNU6-49P-201ENST00000384256 107 ntBASIC-0.94□□□□□ -2.56
PDGFBP01127 RNU6-129P-201ENST00000391022 107 ntBASIC-0.94□□□□□ -2.56
PDGFBP01127 RNU6-656P-201ENST00000516785 107 ntBASIC-0.94□□□□□ -2.56
PDGFBP01127 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.94□□□□□ -2.56
PDGFBP01127 RNU6-226P-201ENST00000363778 107 ntBASIC-0.95□□□□□ -2.56
PDGFBP01127 RNU6-478P-201ENST00000363904 110 ntBASIC-0.95□□□□□ -2.56
PDGFBP01127 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.95□□□□□ -2.56
PDGFBP01127 RNY1P1-201ENST00000364372 112 ntBASIC-0.95□□□□□ -2.56
PDGFBP01127 SNORA8.1-201ENST00000384250 140 ntBASIC-0.95□□□□□ -2.56
PDGFBP01127 RNU6-303P-201ENST00000517091 106 ntBASIC-0.95□□□□□ -2.56
PDGFBP01127 AC006160.2-201ENST00000637708 154 ntBASIC-0.95□□□□□ -2.56
PDGFBP01127 MIR365A-201ENST00000362260 87 ntBASIC-0.96□□□□□ -2.56
PDGFBP01127 SNORD45.1-201ENST00000363181 77 ntBASIC-0.96□□□□□ -2.56
PDGFBP01127 RNU6-924P-201ENST00000362926 108 ntBASIC-0.97□□□□□ -2.56
PDGFBP01127 RNU6-604P-201ENST00000390917 100 ntBASIC-0.97□□□□□ -2.56
PDGFBP01127 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.97□□□□□ -2.56
PDGFBP01127 AL021921.1-201ENST00000442774 93 ntBASIC-0.98□□□□□ -2.57
PDGFBP01127 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.98□□□□□ -2.57
PDGFBP01127 RNU6-497P-201ENST00000365316 104 ntBASIC-0.99□□□□□ -2.57
PDGFBP01127 SNORD64-201ENST00000386683 67 ntBASIC-0.99□□□□□ -2.57
PDGFBP01127 RNU7-88P-201ENST00000458752 63 ntBASIC-0.99□□□□□ -2.57
PDGFBP01127 RNU6-982P-201ENST00000516216 102 ntBASIC-0.99□□□□□ -2.57
PDGFBP01127 RNU6-557P-201ENST00000516842 110 ntBASIC-0.99□□□□□ -2.57
PDGFBP01127 RNU6-675P-201ENST00000384236 104 ntBASIC-1□□□□□ -2.57
PDGFBP01127 RNU7-154P-201ENST00000516194 62 ntBASIC-1□□□□□ -2.57
PDGFBP01127 U2.7-201ENST00000619197 100 ntBASIC-1□□□□□ -2.57
PDGFBP01127 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.01□□□□□ -2.57
PDGFBP01127 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.01□□□□□ -2.57
PDGFBP01127 RNU6-431P-201ENST00000383874 107 ntBASIC-1.01□□□□□ -2.57
PDGFBP01127 MIR548AG1-201ENST00000579932 66 ntBASIC-1.01□□□□□ -2.57
PDGFBP01127 MIR1246-201ENST00000636535 73 ntBASIC-1.01□□□□□ -2.57
PDGFBP01127 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.02□□□□□ -2.57
PDGFBP01127 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.02□□□□□ -2.57
PDGFBP01127 RNA5SP180-201ENST00000516181 101 ntBASIC-1.02□□□□□ -2.57
PDGFBP01127 MIR4441-201ENST00000582623 100 ntBASIC-1.02□□□□□ -2.57
PDGFBP01127 RNU6-380P-201ENST00000410207 107 ntBASIC-1.03□□□□□ -2.57
PDGFBP01127 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.04□□□□□ -2.58
PDGFBP01127 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
PDGFBP01127 MIR494-201ENST00000349529 81 ntBASIC-1.05□□□□□ -2.58
PDGFBP01127 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.05□□□□□ -2.58
PDGFBP01127 AC074348.1-201ENST00000426503 132 ntBASIC-1.05□□□□□ -2.58
PDGFBP01127 RNU6-807P-201ENST00000516805 107 ntBASIC-1.05□□□□□ -2.58
PDGFBP01127 MIR548V-201ENST00000584165 80 ntBASIC-1.05□□□□□ -2.58
PDGFBP01127 MIR664A-201ENST00000626086 82 ntBASIC-1.05□□□□□ -2.58
PDGFBP01127 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.06□□□□□ -2.58
PDGFBP01127 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.06□□□□□ -2.58
PDGFBP01127 snoU83B.1-201ENST00000517136 88 ntBASIC-1.06□□□□□ -2.58
PDGFBP01127 MIR5588-201ENST00000581890 63 ntBASIC-1.06□□□□□ -2.58
PDGFBP01127 RNU6-153P-201ENST00000364422 104 ntBASIC-1.07□□□□□ -2.58
PDGFBP01127 SNORD63.1-201ENST00000516178 80 ntBASIC-1.07□□□□□ -2.58
PDGFBP01127 MIR4306-201ENST00000583390 91 ntBASIC-1.07□□□□□ -2.58
PDGFBP01127 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.08□□□□□ -2.58
PDGFBP01127 U7.5-201ENST00000517224 61 ntBASIC-1.08□□□□□ -2.58
PDGFBP01127 RNU6-706P-201ENST00000517229 104 ntBASIC-1.08□□□□□ -2.58
PDGFBP01127 MIR147A-201ENST00000385079 72 ntBASIC-1.09□□□□□ -2.58
PDGFBP01127 MIR8485-201ENST00000401372 91 ntBASIC-1.09□□□□□ -2.58
PDGFBP01127 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
PDGFBP01127 HLA-S-202ENST00000425174 53 ntBASIC-1.09□□□□□ -2.58
PDGFBP01127 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.09□□□□□ -2.58
PDGFBP01127 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.09□□□□□ -2.58
PDGFBP01127 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.1□□□□□ -2.59
PDGFBP01127 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.1□□□□□ -2.59
PDGFBP01127 SCARNA18B-201ENST00000458806 135 ntBASIC-1.1□□□□□ -2.59
PDGFBP01127 MIR382-201ENST00000637119 76 ntBASIC-1.1□□□□□ -2.59
PDGFBP01127 MIR1297-201ENST00000637311 77 ntBASIC-1.1□□□□□ -2.59
PDGFBP01127 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.11□□□□□ -2.59
PDGFBP01127 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.11□□□□□ -2.59
PDGFBP01127 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.12□□□□□ -2.59
PDGFBP01127 RNU6-979P-201ENST00000383896 107 ntBASIC-1.12□□□□□ -2.59
PDGFBP01127 SNORD45A-201ENST00000384512 84 ntBASIC-1.12□□□□□ -2.59
PDGFBP01127 MIR527-201ENST00000385244 85 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms