Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.43□□□□□ -2.64
LRRC42Q9Y546 RNU6-340P-201ENST00000364005 107 ntBASIC-1.43□□□□□ -2.64
LRRC42Q9Y546 SNORD116-21-201ENST00000384507 92 ntBASIC-1.43□□□□□ -2.64
LRRC42Q9Y546 RNU6-706P-201ENST00000517229 104 ntBASIC-1.43□□□□□ -2.64
LRRC42Q9Y546 U2.7-201ENST00000619197 100 ntBASIC-1.43□□□□□ -2.64
LRRC42Q9Y546 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.43□□□□□ -2.64
LRRC42Q9Y546 SNORD115-27-201ENST00000364430 82 ntBASIC-1.44□□□□□ -2.64
LRRC42Q9Y546 AL035461.1-201ENST00000421490 332 ntBASIC-1.44□□□□□ -2.64
LRRC42Q9Y546 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.44□□□□□ -2.64
LRRC42Q9Y546 MIR6874-201ENST00000635894 71 ntBASIC-1.44□□□□□ -2.64
LRRC42Q9Y546 AC138207.3-201ENST00000585289 166 ntBASIC-1.45□□□□□ -2.64
LRRC42Q9Y546 MIR5683-201ENST00000636514 76 ntBASIC-1.45□□□□□ -2.64
LRRC42Q9Y546 MIR590-201ENST00000385008 97 ntBASIC-1.46□□□□□ -2.64
LRRC42Q9Y546 AL450471.1-201ENST00000447509 127 ntBASIC-1.46□□□□□ -2.64
LRRC42Q9Y546 MIR3115-201ENST00000577915 68 ntBASIC-1.46□□□□□ -2.64
LRRC42Q9Y546 RNU6-164P-201ENST00000364604 103 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 SNORD116-14-201ENST00000383894 92 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 SNORD116-17-201ENST00000383929 92 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 SNORD116-15-201ENST00000384445 92 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 SNORD116-19-201ENST00000384729 92 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 RPL35AP4-201ENST00000412007 102 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 RNU6-162P-201ENST00000516228 103 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.47□□□□□ -2.64
LRRC42Q9Y546 RNA5SP192-201ENST00000364404 120 ntBASIC-1.48□□□□□ -2.65
LRRC42Q9Y546 RNU6-10P-201ENST00000384036 107 ntBASIC-1.48□□□□□ -2.65
LRRC42Q9Y546 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.48□□□□□ -2.65
LRRC42Q9Y546 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.49□□□□□ -2.65
LRRC42Q9Y546 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.49□□□□□ -2.65
LRRC42Q9Y546 RNU6-907P-201ENST00000390924 102 ntBASIC-1.49□□□□□ -2.65
LRRC42Q9Y546 AC090616.4-201ENST00000448026 115 ntBASIC-1.49□□□□□ -2.65
LRRC42Q9Y546 U7.3-201ENST00000616123 62 ntBASIC-1.49□□□□□ -2.65
LRRC42Q9Y546 MIR6502-201ENST00000617296 76 ntBASIC-1.49□□□□□ -2.65
LRRC42Q9Y546 RNU6-478P-201ENST00000363904 110 ntBASIC-1.5□□□□□ -2.65
LRRC42Q9Y546 MIR1302-5-201ENST00000408164 150 ntBASIC-1.5□□□□□ -2.65
LRRC42Q9Y546 RNU6-807P-201ENST00000516805 107 ntBASIC-1.5□□□□□ -2.65
LRRC42Q9Y546 MIR4490-201ENST00000582647 84 ntBASIC-1.5□□□□□ -2.65
LRRC42Q9Y546 MIR6086-201ENST00000638065 55 ntBASIC-1.5□□□□□ -2.65
LRRC42Q9Y546 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.51□□□□□ -2.65
LRRC42Q9Y546 SNORD77.2-201ENST00000391045 68 ntBASIC-1.51□□□□□ -2.65
LRRC42Q9Y546 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.51□□□□□ -2.65
LRRC42Q9Y546 RNU6-109P-201ENST00000516364 107 ntBASIC-1.51□□□□□ -2.65
LRRC42Q9Y546 RNU6-184P-201ENST00000516514 107 ntBASIC-1.51□□□□□ -2.65
LRRC42Q9Y546 MIR3165-201ENST00000579874 75 ntBASIC-1.51□□□□□ -2.65
LRRC42Q9Y546 MIR4520-1-201ENST00000582609 70 ntBASIC-1.51□□□□□ -2.65
LRRC42Q9Y546 RNU6-681P-201ENST00000364012 104 ntBASIC-1.52□□□□□ -2.65
LRRC42Q9Y546 RNU6-645P-201ENST00000364649 106 ntBASIC-1.52□□□□□ -2.65
LRRC42Q9Y546 AL078595.1-201ENST00000404458 226 ntBASIC-1.52□□□□□ -2.65
LRRC42Q9Y546 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.53□□□□□ -2.65
LRRC42Q9Y546 HLA-S-202ENST00000425174 53 ntBASIC-1.53□□□□□ -2.65
LRRC42Q9Y546 snoU13.19-201ENST00000459148 104 ntBASIC-1.53□□□□□ -2.65
LRRC42Q9Y546 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.53□□□□□ -2.65
LRRC42Q9Y546 MIR5591-201ENST00000578248 65 ntBASIC-1.53□□□□□ -2.65
LRRC42Q9Y546 RNU6-30P-201ENST00000384561 107 ntBASIC-1.54□□□□□ -2.66
LRRC42Q9Y546 MIR587-201ENST00000384845 96 ntBASIC-1.54□□□□□ -2.66
LRRC42Q9Y546 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
LRRC42Q9Y546 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.54□□□□□ -2.66
LRRC42Q9Y546 MIR519C-201ENST00000385053 87 ntBASIC-1.55□□□□□ -2.66
LRRC42Q9Y546 RNU6-554P-201ENST00000410466 106 ntBASIC-1.55□□□□□ -2.66
LRRC42Q9Y546 RNU6-168P-201ENST00000516189 101 ntBASIC-1.55□□□□□ -2.66
LRRC42Q9Y546 RNU6-458P-201ENST00000384179 107 ntBASIC-1.56□□□□□ -2.66
LRRC42Q9Y546 RNU6-106P-201ENST00000384405 107 ntBASIC-1.56□□□□□ -2.66
LRRC42Q9Y546 RNU7-174P-201ENST00000516248 59 ntBASIC-1.56□□□□□ -2.66
LRRC42Q9Y546 U6.58-201ENST00000613107 107 ntBASIC-1.56□□□□□ -2.66
LRRC42Q9Y546 MIR6129-201ENST00000616087 109 ntBASIC-1.56□□□□□ -2.66
LRRC42Q9Y546 RNU6-330P-201ENST00000363015 107 ntBASIC-1.57□□□□□ -2.66
LRRC42Q9Y546 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.57□□□□□ -2.66
LRRC42Q9Y546 MIR548Q-201ENST00000408404 100 ntBASIC-1.57□□□□□ -2.66
LRRC42Q9Y546 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.58□□□□□ -2.66
LRRC42Q9Y546 SNORA19-201ENST00000384737 128 ntBASIC-1.58□□□□□ -2.66
LRRC42Q9Y546 MIR548C-201ENST00000384815 97 ntBASIC-1.58□□□□□ -2.66
LRRC42Q9Y546 MTATP8P2-201ENST00000435212 202 ntBASIC-1.58□□□□□ -2.66
LRRC42Q9Y546 MIR4770-201ENST00000579149 58 ntBASIC-1.59□□□□□ -2.66
LRRC42Q9Y546 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.6□□□□□ -2.67
LRRC42Q9Y546 RNU6-608P-201ENST00000383927 104 ntBASIC-1.6□□□□□ -2.67
LRRC42Q9Y546 MIR520D-201ENST00000385002 87 ntBASIC-1.6□□□□□ -2.67
LRRC42Q9Y546 RNU6-696P-201ENST00000390834 107 ntBASIC-1.6□□□□□ -2.67
LRRC42Q9Y546 AC090425.1-201ENST00000610007 140 ntBASIC-1.6□□□□□ -2.67
LRRC42Q9Y546 RNU6-624P-201ENST00000363411 107 ntBASIC-1.61□□□□□ -2.67
LRRC42Q9Y546 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.61□□□□□ -2.67
LRRC42Q9Y546 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.61□□□□□ -2.67
LRRC42Q9Y546 RNU6-587P-201ENST00000391282 106 ntBASIC-1.61□□□□□ -2.67
LRRC42Q9Y546 SNORD57-201ENST00000448188 72 ntBASIC-1.61□□□□□ -2.67
LRRC42Q9Y546 RNU6-633P-201ENST00000362612 103 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 RNU6-630P-201ENST00000391258 106 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 RNU6-982P-201ENST00000516216 102 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 U4.4-201ENST00000620626 117 ntBASIC-1.62□□□□□ -2.67
LRRC42Q9Y546 RNU6-226P-201ENST00000363778 107 ntBASIC-1.63□□□□□ -2.67
LRRC42Q9Y546 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.63□□□□□ -2.67
LRRC42Q9Y546 RNU6-604P-201ENST00000390917 100 ntBASIC-1.63□□□□□ -2.67
LRRC42Q9Y546 AC018880.2-201ENST00000414265 201 ntBASIC-1.63□□□□□ -2.67
LRRC42Q9Y546 RNA5SP67-201ENST00000516422 131 ntBASIC-1.63□□□□□ -2.67
LRRC42Q9Y546 RNU6-766P-201ENST00000362478 107 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 RNU6-79P-201ENST00000362511 107 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 SNORD115-37-201ENST00000363768 82 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 RNU6-598P-201ENST00000364017 105 ntBASIC-1.64□□□□□ -2.67
LRRC42Q9Y546 SNORA8.1-201ENST00000384250 140 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 1613 ms