Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.54□□□□□ -2.66
NUP50Q9UKX7 SNORA26.4-201ENST00000391188 123 ntBASIC-1.54□□□□□ -2.66
NUP50Q9UKX7 MIR8485-201ENST00000401372 91 ntBASIC-1.54□□□□□ -2.66
NUP50Q9UKX7 RNU6-659P-201ENST00000516454 104 ntBASIC-1.54□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.55□□□□□ -2.66
NUP50Q9UKX7 RNU6-746P-201ENST00000384112 109 ntBASIC-1.55□□□□□ -2.66
NUP50Q9UKX7 SNORD63.1-201ENST00000516178 80 ntBASIC-1.55□□□□□ -2.66
NUP50Q9UKX7 RNU6-346P-201ENST00000516288 111 ntBASIC-1.55□□□□□ -2.66
NUP50Q9UKX7 SNORD115-33-201ENST00000363723 82 ntBASIC-1.56□□□□□ -2.66
NUP50Q9UKX7 SNORD116-10-201ENST00000363791 102 ntBASIC-1.56□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.56□□□□□ -2.66
NUP50Q9UKX7 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.56□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.56□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 RNU6-880P-201ENST00000384526 107 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 MIR6129-201ENST00000616087 109 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 MIR6739-201ENST00000622461 75 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 AC099654.10-201ENST00000640395 161 ntBASIC-1.57□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.58□□□□□ -2.66
NUP50Q9UKX7 RNY1P5-201ENST00000383890 115 ntBASIC-1.58□□□□□ -2.66
NUP50Q9UKX7 MIR519A2-201ENST00000384990 87 ntBASIC-1.58□□□□□ -2.66
NUP50Q9UKX7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.58□□□□□ -2.66
NUP50Q9UKX7 RNU6-732P-201ENST00000516033 103 ntBASIC-1.58□□□□□ -2.66
NUP50Q9UKX7 RNU6-412P-201ENST00000516434 106 ntBASIC-1.58□□□□□ -2.66
NUP50Q9UKX7 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.59□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.59□□□□□ -2.66
NUP50Q9UKX7 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.59□□□□□ -2.66
NUP50Q9UKX7 MIR1236-201ENST00000408340 102 ntBASIC-1.59□□□□□ -2.66
NUP50Q9UKX7 RNU6-752P-201ENST00000516376 102 ntBASIC-1.59□□□□□ -2.66
NUP50Q9UKX7 RNU6-255P-201ENST00000516957 105 ntBASIC-1.59□□□□□ -2.66
NUP50Q9UKX7 MIR6818-201ENST00000621576 65 ntBASIC-1.59□□□□□ -2.66
NUP50Q9UKX7 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.6□□□□□ -2.67
NUP50Q9UKX7 RNU6-537P-201ENST00000517277 103 ntBASIC-1.6□□□□□ -2.67
NUP50Q9UKX7 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.61□□□□□ -2.67
NUP50Q9UKX7 RNU7-61P-201ENST00000515897 61 ntBASIC-1.61□□□□□ -2.67
NUP50Q9UKX7 RNU6-518P-201ENST00000516056 96 ntBASIC-1.61□□□□□ -2.67
NUP50Q9UKX7 MIR4719-201ENST00000585233 84 ntBASIC-1.61□□□□□ -2.67
NUP50Q9UKX7 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.61□□□□□ -2.67
NUP50Q9UKX7 MIR6502-201ENST00000617296 76 ntBASIC-1.61□□□□□ -2.67
NUP50Q9UKX7 SNORD115-22-201ENST00000364456 82 ntBASIC-1.62□□□□□ -2.67
NUP50Q9UKX7 SNORD116-21-201ENST00000384507 92 ntBASIC-1.62□□□□□ -2.67
NUP50Q9UKX7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.62□□□□□ -2.67
NUP50Q9UKX7 MIR527-201ENST00000385244 85 ntBASIC-1.63□□□□□ -2.67
NUP50Q9UKX7 MIR889-201ENST00000401280 79 ntBASIC-1.63□□□□□ -2.67
NUP50Q9UKX7 AL450471.1-201ENST00000447509 127 ntBASIC-1.63□□□□□ -2.67
NUP50Q9UKX7 RNU7-153P-201ENST00000516455 62 ntBASIC-1.63□□□□□ -2.67
NUP50Q9UKX7 MIR590-201ENST00000385008 97 ntBASIC-1.64□□□□□ -2.67
NUP50Q9UKX7 AL021921.1-201ENST00000442774 93 ntBASIC-1.64□□□□□ -2.67
NUP50Q9UKX7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
NUP50Q9UKX7 RNU6-340P-201ENST00000364005 107 ntBASIC-1.66□□□□□ -2.68
NUP50Q9UKX7 AL353691.2-201ENST00000443795 59 ntBASIC-1.66□□□□□ -2.68
NUP50Q9UKX7 RNU6-119P-201ENST00000364882 107 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 SNORD116-14-201ENST00000383894 92 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 SNORD116-17-201ENST00000383929 92 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 SNORD116-15-201ENST00000384445 92 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 RNU6-540P-201ENST00000384622 101 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 SNORD116-19-201ENST00000384729 92 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 RNU6-907P-201ENST00000390924 102 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 RNU4-61P-201ENST00000411243 107 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.67□□□□□ -2.68
NUP50Q9UKX7 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.68□□□□□ -2.68
NUP50Q9UKX7 RNU6-576P-201ENST00000390854 102 ntBASIC-1.68□□□□□ -2.68
NUP50Q9UKX7 RNU2-51P-201ENST00000410708 197 ntBASIC-1.68□□□□□ -2.68
NUP50Q9UKX7 RNU6-983P-201ENST00000516004 103 ntBASIC-1.68□□□□□ -2.68
NUP50Q9UKX7 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.68□□□□□ -2.68
NUP50Q9UKX7 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.69□□□□□ -2.68
NUP50Q9UKX7 MIR1302-5-201ENST00000408164 150 ntBASIC-1.69□□□□□ -2.68
NUP50Q9UKX7 RNU6-162P-201ENST00000516228 103 ntBASIC-1.69□□□□□ -2.68
NUP50Q9UKX7 MIR548AG1-201ENST00000579932 66 ntBASIC-1.69□□□□□ -2.68
NUP50Q9UKX7 U7.3-201ENST00000616123 62 ntBASIC-1.69□□□□□ -2.68
NUP50Q9UKX7 RNU6-681P-201ENST00000364012 104 ntBASIC-1.7□□□□□ -2.68
NUP50Q9UKX7 AL035461.1-201ENST00000421490 332 ntBASIC-1.7□□□□□ -2.68
NUP50Q9UKX7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.7□□□□□ -2.68
NUP50Q9UKX7 RNA5SP26-201ENST00000362406 119 ntBASIC-1.71□□□□□ -2.68
NUP50Q9UKX7 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.71□□□□□ -2.68
NUP50Q9UKX7 SNORD115-27-201ENST00000364430 82 ntBASIC-1.71□□□□□ -2.68
NUP50Q9UKX7 RNA5SP86-201ENST00000390869 98 ntBASIC-1.71□□□□□ -2.68
NUP50Q9UKX7 SNORD77.2-201ENST00000391045 68 ntBASIC-1.71□□□□□ -2.68
NUP50Q9UKX7 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.71□□□□□ -2.68
NUP50Q9UKX7 RNU6-656P-201ENST00000516785 107 ntBASIC-1.71□□□□□ -2.68
NUP50Q9UKX7 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.72□□□□□ -2.68
NUP50Q9UKX7 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.72□□□□□ -2.68
NUP50Q9UKX7 RNU6-246P-201ENST00000384702 107 ntBASIC-1.73□□□□□ -2.69
NUP50Q9UKX7 RNU6-109P-201ENST00000516364 107 ntBASIC-1.73□□□□□ -2.69
NUP50Q9UKX7 RNU6-184P-201ENST00000516514 107 ntBASIC-1.73□□□□□ -2.69
NUP50Q9UKX7 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.73□□□□□ -2.69
NUP50Q9UKX7 U2.7-201ENST00000619197 100 ntBASIC-1.73□□□□□ -2.69
NUP50Q9UKX7 AC091912.2-201ENST00000624798 167 ntBASIC-1.73□□□□□ -2.69
NUP50Q9UKX7 MIR507-201ENST00000385234 94 ntBASIC-1.74□□□□□ -2.69
NUP50Q9UKX7 RNU6-554P-201ENST00000410466 106 ntBASIC-1.74□□□□□ -2.69
NUP50Q9UKX7 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.75□□□□□ -2.69
NUP50Q9UKX7 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.75□□□□□ -2.69
NUP50Q9UKX7 MIR519C-201ENST00000385053 87 ntBASIC-1.75□□□□□ -2.69
NUP50Q9UKX7 MIR496-201ENST00000385226 102 ntBASIC-1.75□□□□□ -2.69
NUP50Q9UKX7 RNU7-88P-201ENST00000458752 63 ntBASIC-1.75□□□□□ -2.69
NUP50Q9UKX7 RNU6-807P-201ENST00000516805 107 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms