Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.36□□□□□ -2.63
CCDC68Q9H2F9 MIR124-2-201ENST00000385081 109 ntBASIC-1.37□□□□□ -2.63
CCDC68Q9H2F9 MT-TR-201ENST00000387439 65 ntBASIC-1.37□□□□□ -2.63
CCDC68Q9H2F9 AL450471.1-201ENST00000447509 127 ntBASIC-1.37□□□□□ -2.63
CCDC68Q9H2F9 MIR4306-201ENST00000583390 91 ntBASIC-1.37□□□□□ -2.63
CCDC68Q9H2F9 SNORA33.1-201ENST00000364957 130 ntBASIC-1.38□□□□□ -2.63
CCDC68Q9H2F9 MIR548M-201ENST00000408260 86 ntBASIC-1.38□□□□□ -2.63
CCDC68Q9H2F9 RNU7-153P-201ENST00000516455 62 ntBASIC-1.38□□□□□ -2.63
CCDC68Q9H2F9 AL353803.5-201ENST00000599815 141 ntBASIC-1.38□□□□□ -2.63
CCDC68Q9H2F9 SNX3P1X-201ENST00000414887 175 ntBASIC-1.39□□□□□ -2.63
CCDC68Q9H2F9 RNU6-834P-201ENST00000362367 110 ntBASIC-1.4□□□□□ -2.63
CCDC68Q9H2F9 RNU6-766P-201ENST00000362478 107 ntBASIC-1.4□□□□□ -2.63
CCDC68Q9H2F9 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.4□□□□□ -2.63
CCDC68Q9H2F9 RNU6-589P-201ENST00000516485 107 ntBASIC-1.41□□□□□ -2.64
CCDC68Q9H2F9 MIR4320-201ENST00000636981 65 ntBASIC-1.41□□□□□ -2.64
CCDC68Q9H2F9 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.42□□□□□ -2.64
CCDC68Q9H2F9 MIR1255B2-201ENST00000408618 67 ntBASIC-1.42□□□□□ -2.64
CCDC68Q9H2F9 SNORD114-17-201ENST00000364699 75 ntBASIC-1.43□□□□□ -2.64
CCDC68Q9H2F9 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.43□□□□□ -2.64
CCDC68Q9H2F9 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.43□□□□□ -2.64
CCDC68Q9H2F9 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.44□□□□□ -2.64
CCDC68Q9H2F9 RNU6-22P-201ENST00000384355 107 ntBASIC-1.44□□□□□ -2.64
CCDC68Q9H2F9 MIR519C-201ENST00000385053 87 ntBASIC-1.44□□□□□ -2.64
CCDC68Q9H2F9 RNU7-134P-201ENST00000458997 64 ntBASIC-1.44□□□□□ -2.64
CCDC68Q9H2F9 CYP3A54P-201ENST00000566950 75 ntBASIC-1.44□□□□□ -2.64
CCDC68Q9H2F9 RNU6-752P-201ENST00000516376 102 ntBASIC-1.45□□□□□ -2.64
CCDC68Q9H2F9 snoU83B.1-201ENST00000517136 88 ntBASIC-1.45□□□□□ -2.64
CCDC68Q9H2F9 MTATP8P2-201ENST00000435212 202 ntBASIC-1.46□□□□□ -2.64
CCDC68Q9H2F9 MIR3115-201ENST00000577915 68 ntBASIC-1.46□□□□□ -2.64
CCDC68Q9H2F9 RNU6-681P-201ENST00000364012 104 ntBASIC-1.47□□□□□ -2.64
CCDC68Q9H2F9 SNORD115-27-201ENST00000364430 82 ntBASIC-1.47□□□□□ -2.64
CCDC68Q9H2F9 MIR521-2-201ENST00000384818 87 ntBASIC-1.47□□□□□ -2.64
CCDC68Q9H2F9 MIR2052-201ENST00000636055 55 ntBASIC-1.47□□□□□ -2.64
CCDC68Q9H2F9 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.48□□□□□ -2.65
CCDC68Q9H2F9 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.48□□□□□ -2.65
CCDC68Q9H2F9 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.48□□□□□ -2.65
CCDC68Q9H2F9 RNU6-158P-201ENST00000517104 100 ntBASIC-1.48□□□□□ -2.65
CCDC68Q9H2F9 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.49□□□□□ -2.65
CCDC68Q9H2F9 SNORD77.2-201ENST00000391045 68 ntBASIC-1.49□□□□□ -2.65
CCDC68Q9H2F9 AL031737.1-201ENST00000450125 223 ntBASIC-1.49□□□□□ -2.65
CCDC68Q9H2F9 RNU6-479P-201ENST00000516348 105 ntBASIC-1.49□□□□□ -2.65
CCDC68Q9H2F9 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.49□□□□□ -2.65
CCDC68Q9H2F9 MIR4464-201ENST00000580818 92 ntBASIC-1.49□□□□□ -2.65
CCDC68Q9H2F9 SNORD115-37-201ENST00000363768 82 ntBASIC-1.5□□□□□ -2.65
CCDC68Q9H2F9 RNU6-340P-201ENST00000364005 107 ntBASIC-1.5□□□□□ -2.65
CCDC68Q9H2F9 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.5□□□□□ -2.65
CCDC68Q9H2F9 MIR8485-201ENST00000401372 91 ntBASIC-1.5□□□□□ -2.65
CCDC68Q9H2F9 RNU6-313P-201ENST00000516317 112 ntBASIC-1.5□□□□□ -2.65
CCDC68Q9H2F9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.51□□□□□ -2.65
CCDC68Q9H2F9 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.51□□□□□ -2.65
CCDC68Q9H2F9 MIR3165-201ENST00000579874 75 ntBASIC-1.51□□□□□ -2.65
CCDC68Q9H2F9 AL445584.3-201ENST00000617173 78 ntBASIC-1.51□□□□□ -2.65
CCDC68Q9H2F9 MIR6888-201ENST00000621977 67 ntBASIC-1.51□□□□□ -2.65
CCDC68Q9H2F9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.53□□□□□ -2.65
CCDC68Q9H2F9 RNU6-706P-201ENST00000517229 104 ntBASIC-1.53□□□□□ -2.65
CCDC68Q9H2F9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
CCDC68Q9H2F9 MIR6739-201ENST00000622461 75 ntBASIC-1.53□□□□□ -2.65
CCDC68Q9H2F9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
CCDC68Q9H2F9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.54□□□□□ -2.66
CCDC68Q9H2F9 AC132825.6-201ENST00000638861 357 ntBASIC-1.54□□□□□ -2.66
CCDC68Q9H2F9 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.55□□□□□ -2.66
CCDC68Q9H2F9 MIR1468-201ENST00000410600 86 ntBASIC-1.55□□□□□ -2.66
CCDC68Q9H2F9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.55□□□□□ -2.66
CCDC68Q9H2F9 MIR198-201ENST00000637333 62 ntBASIC-1.55□□□□□ -2.66
CCDC68Q9H2F9 MIR450A1-201ENST00000362262 91 ntBASIC-1.56□□□□□ -2.66
CCDC68Q9H2F9 RNU6-633P-201ENST00000362612 103 ntBASIC-1.56□□□□□ -2.66
CCDC68Q9H2F9 RNU6-924P-201ENST00000362926 108 ntBASIC-1.56□□□□□ -2.66
CCDC68Q9H2F9 MIR4668-201ENST00000582284 70 ntBASIC-1.56□□□□□ -2.66
CCDC68Q9H2F9 MIR601-201ENST00000385256 79 ntBASIC-1.57□□□□□ -2.66
CCDC68Q9H2F9 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.57□□□□□ -2.66
CCDC68Q9H2F9 RNU2-51P-201ENST00000410708 197 ntBASIC-1.58□□□□□ -2.66
CCDC68Q9H2F9 AC138207.3-201ENST00000585289 166 ntBASIC-1.58□□□□□ -2.66
CCDC68Q9H2F9 AL035461.1-201ENST00000421490 332 ntBASIC-1.59□□□□□ -2.66
CCDC68Q9H2F9 RNU7-154P-201ENST00000516194 62 ntBASIC-1.59□□□□□ -2.66
CCDC68Q9H2F9 MIR6818-201ENST00000621576 65 ntBASIC-1.59□□□□□ -2.66
CCDC68Q9H2F9 MIR29B1-201ENST00000385015 81 ntBASIC-1.6□□□□□ -2.67
CCDC68Q9H2F9 MIR889-201ENST00000401280 79 ntBASIC-1.6□□□□□ -2.67
CCDC68Q9H2F9 RNU6-518P-201ENST00000516056 96 ntBASIC-1.6□□□□□ -2.67
CCDC68Q9H2F9 MIR519A2-201ENST00000384990 87 ntBASIC-1.61□□□□□ -2.67
CCDC68Q9H2F9 AC093729.1-201ENST00000513074 128 ntBASIC-1.61□□□□□ -2.67
CCDC68Q9H2F9 SNORA40.13-201ENST00000516379 120 ntBASIC-1.61□□□□□ -2.67
CCDC68Q9H2F9 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.62□□□□□ -2.67
CCDC68Q9H2F9 SNORD116-22-201ENST00000384430 92 ntBASIC-1.62□□□□□ -2.67
CCDC68Q9H2F9 SNORD63.1-201ENST00000516178 80 ntBASIC-1.62□□□□□ -2.67
CCDC68Q9H2F9 MIR527-201ENST00000385244 85 ntBASIC-1.63□□□□□ -2.67
CCDC68Q9H2F9 HLA-S-202ENST00000425174 53 ntBASIC-1.63□□□□□ -2.67
CCDC68Q9H2F9 MIR3910-1-201ENST00000580936 111 ntBASIC-1.63□□□□□ -2.67
CCDC68Q9H2F9 AL021921.1-201ENST00000442774 93 ntBASIC-1.64□□□□□ -2.67
CCDC68Q9H2F9 AP001318.4-201ENST00000616637 121 ntBASIC-1.64□□□□□ -2.67
CCDC68Q9H2F9 RNY4P18-201ENST00000391107 89 ntBASIC-1.65□□□□□ -2.67
CCDC68Q9H2F9 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.65□□□□□ -2.67
CCDC68Q9H2F9 MIR5591-201ENST00000578248 65 ntBASIC-1.65□□□□□ -2.67
CCDC68Q9H2F9 RNA5SP26-201ENST00000362406 119 ntBASIC-1.66□□□□□ -2.68
CCDC68Q9H2F9 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.66□□□□□ -2.68
CCDC68Q9H2F9 MIR6502-201ENST00000617296 76 ntBASIC-1.66□□□□□ -2.68
CCDC68Q9H2F9 MALAT1.1-201ENST00000618249 95 ntBASIC-1.66□□□□□ -2.68
CCDC68Q9H2F9 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.67□□□□□ -2.68
CCDC68Q9H2F9 RNU6-624P-201ENST00000363411 107 ntBASIC-1.68□□□□□ -2.68
CCDC68Q9H2F9 RNA5SP461-201ENST00000516451 104 ntBASIC-1.68□□□□□ -2.68
CCDC68Q9H2F9 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms