Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 MIR548V-201ENST00000584165 80 ntBASIC0.4□□□□□ -2.35
SEMA4CQ9C0C4 U7.6-201ENST00000610841 64 ntBASIC0.4□□□□□ -2.35
SEMA4CQ9C0C4 AC090617.8-201ENST00000623339 167 ntBASIC0.4□□□□□ -2.35
SEMA4CQ9C0C4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.4□□□□□ -2.35
SEMA4CQ9C0C4 MTND4LP1-201ENST00000446263 157 ntBASIC0.39□□□□□ -2.35
SEMA4CQ9C0C4 MIR548AD-201ENST00000584780 82 ntBASIC0.39□□□□□ -2.35
SEMA4CQ9C0C4 MIR6718-201ENST00000616153 80 ntBASIC0.39□□□□□ -2.35
SEMA4CQ9C0C4 MIR6739-201ENST00000622461 75 ntBASIC0.39□□□□□ -2.35
SEMA4CQ9C0C4 U6.96-201ENST00000636425 70 ntBASIC0.39□□□□□ -2.35
SEMA4CQ9C0C4 MIR20A-201ENST00000362279 71 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 SNORD114-29-201ENST00000364819 70 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 Y_RNA.443-201ENST00000384135 111 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 RNU6-1162P-201ENST00000384443 104 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 RNU6-800P-201ENST00000384473 103 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 RNU6-539P-201ENST00000516665 103 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 MIR5589-201ENST00000579442 60 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 AC005520.4-201ENST00000604337 90 ntBASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
SEMA4CQ9C0C4 SNORA49-201ENST00000386157 136 ntBASIC0.37□□□□□ -2.35
SEMA4CQ9C0C4 SNORA9.1-201ENST00000362412 131 ntBASIC0.36□□□□□ -2.35
SEMA4CQ9C0C4 Y_RNA.386-201ENST00000383913 105 ntBASIC0.36□□□□□ -2.35
SEMA4CQ9C0C4 MIR521-2-201ENST00000384818 87 ntBASIC0.36□□□□□ -2.35
SEMA4CQ9C0C4 AC244090.1-201ENST00000441884 93 ntBASIC0.36□□□□□ -2.35
SEMA4CQ9C0C4 Y_RNA.633-201ENST00000459107 95 ntBASIC0.36□□□□□ -2.35
SEMA4CQ9C0C4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.35□□□□□ -2.35
SEMA4CQ9C0C4 Y_RNA.340-201ENST00000365330 92 ntBASIC0.34□□□□□ -2.36
SEMA4CQ9C0C4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
SEMA4CQ9C0C4 RNU6-1089P-201ENST00000516473 104 ntBASIC0.33□□□□□ -2.36
SEMA4CQ9C0C4 AP000676.1-201ENST00000533307 52 ntBASIC0.33□□□□□ -2.36
SEMA4CQ9C0C4 Y_RNA.250-201ENST00000364542 110 ntBASIC0.32□□□□□ -2.36
SEMA4CQ9C0C4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.32□□□□□ -2.36
SEMA4CQ9C0C4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.32□□□□□ -2.36
SEMA4CQ9C0C4 MIR630-201ENST00000384957 97 ntBASIC0.32□□□□□ -2.36
SEMA4CQ9C0C4 AC069113.3-201ENST00000521019 150 ntBASIC0.32□□□□□ -2.36
SEMA4CQ9C0C4 CYP3A54P-201ENST00000566950 75 ntBASIC0.32□□□□□ -2.36
SEMA4CQ9C0C4 SNORA25.4-201ENST00000363666 124 ntBASIC0.31□□□□□ -2.36
SEMA4CQ9C0C4 RNA5SP299-201ENST00000391203 116 ntBASIC0.31□□□□□ -2.36
SEMA4CQ9C0C4 RNU6-337P-201ENST00000391243 106 ntBASIC0.31□□□□□ -2.36
SEMA4CQ9C0C4 MIR5190-201ENST00000581537 80 ntBASIC0.31□□□□□ -2.36
SEMA4CQ9C0C4 U2.7-201ENST00000619197 100 ntBASIC0.31□□□□□ -2.36
SEMA4CQ9C0C4 MIR9-2-201ENST00000384838 87 ntBASIC0.3□□□□□ -2.36
SEMA4CQ9C0C4 MIR1255B2-201ENST00000408618 67 ntBASIC0.3□□□□□ -2.36
SEMA4CQ9C0C4 RNU6-848P-201ENST00000515948 107 ntBASIC0.3□□□□□ -2.36
SEMA4CQ9C0C4 RNU6-617P-201ENST00000516147 107 ntBASIC0.3□□□□□ -2.36
SEMA4CQ9C0C4 RNU6-473P-201ENST00000516164 107 ntBASIC0.3□□□□□ -2.36
SEMA4CQ9C0C4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.3□□□□□ -2.36
SEMA4CQ9C0C4 MIR593-201ENST00000384856 100 ntBASIC0.29□□□□□ -2.36
SEMA4CQ9C0C4 MIR876-201ENST00000401147 81 ntBASIC0.29□□□□□ -2.36
SEMA4CQ9C0C4 RNA5SP163-201ENST00000410304 99 ntBASIC0.29□□□□□ -2.36
SEMA4CQ9C0C4 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SEMA4CQ9C0C4 MIR6773-201ENST00000612812 74 ntBASIC0.29□□□□□ -2.36
SEMA4CQ9C0C4 MIR6514-201ENST00000622549 70 ntBASIC0.29□□□□□ -2.36
SEMA4CQ9C0C4 RNU6-788P-201ENST00000390967 104 ntBASIC0.28□□□□□ -2.36
SEMA4CQ9C0C4 SNORA75.1-201ENST00000391130 148 ntBASIC0.28□□□□□ -2.36
SEMA4CQ9C0C4 AC125388.1-201ENST00000459631 156 ntBASIC0.28□□□□□ -2.36
SEMA4CQ9C0C4 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 SNORD115-25-201ENST00000362619 82 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 RNU6-590P-201ENST00000365039 107 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 RNU6-1246P-201ENST00000391064 107 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 RNA5SP25-201ENST00000410815 110 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 snoU13.19-201ENST00000459148 104 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 RNU6-518P-201ENST00000516056 96 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 RNU6-782P-201ENST00000516852 104 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 uc_338.36-201ENST00000622331 158 ntBASIC0.27□□□□□ -2.37
SEMA4CQ9C0C4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
SEMA4CQ9C0C4 RNA5SP331-201ENST00000364986 107 ntBASIC0.26□□□□□ -2.37
SEMA4CQ9C0C4 Y_RNA.375-201ENST00000365625 101 ntBASIC0.26□□□□□ -2.37
SEMA4CQ9C0C4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SEMA4CQ9C0C4 MIR548H2-201ENST00000408874 88 ntBASIC0.26□□□□□ -2.37
SEMA4CQ9C0C4 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
SEMA4CQ9C0C4 AC104408.1-201ENST00000605241 170 ntBASIC0.25□□□□□ -2.37
SEMA4CQ9C0C4 RNU6-502P-201ENST00000362419 108 ntBASIC0.24□□□□□ -2.37
SEMA4CQ9C0C4 SNORD114-5-201ENST00000362928 70 ntBASIC0.24□□□□□ -2.37
SEMA4CQ9C0C4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
SEMA4CQ9C0C4 MIR517B-201ENST00000385102 67 ntBASIC0.24□□□□□ -2.37
SEMA4CQ9C0C4 RNU7-174P-201ENST00000516248 59 ntBASIC0.24□□□□□ -2.37
SEMA4CQ9C0C4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
SEMA4CQ9C0C4 MIR519A2-201ENST00000384990 87 ntBASIC0.23□□□□□ -2.37
SEMA4CQ9C0C4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.23□□□□□ -2.37
SEMA4CQ9C0C4 MIR4511-201ENST00000582784 87 ntBASIC0.23□□□□□ -2.37
SEMA4CQ9C0C4 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SEMA4CQ9C0C4 U4.4-201ENST00000620626 117 ntBASIC0.23□□□□□ -2.37
SEMA4CQ9C0C4 Y_RNA.325-201ENST00000365171 122 ntBASIC0.22□□□□□ -2.37
SEMA4CQ9C0C4 MIRLET7B-201ENST00000385140 83 ntBASIC0.22□□□□□ -2.37
SEMA4CQ9C0C4 RNU6-542P-201ENST00000516405 103 ntBASIC0.22□□□□□ -2.37
SEMA4CQ9C0C4 MIR548AG1-201ENST00000579932 66 ntBASIC0.22□□□□□ -2.37
SEMA4CQ9C0C4 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
SEMA4CQ9C0C4 RNA5SP215-201ENST00000363440 122 ntBASIC0.21□□□□□ -2.38
SEMA4CQ9C0C4 SNORD2-201ENST00000459163 69 ntBASIC0.21□□□□□ -2.38
SEMA4CQ9C0C4 RNA5SP98-201ENST00000363158 137 ntBASIC0.2□□□□□ -2.38
SEMA4CQ9C0C4 RNA5SP192-201ENST00000364404 120 ntBASIC0.2□□□□□ -2.38
SEMA4CQ9C0C4 RNU6-471P-201ENST00000383944 106 ntBASIC0.2□□□□□ -2.38
SEMA4CQ9C0C4 MIR145-201ENST00000384967 88 ntBASIC0.2□□□□□ -2.38
SEMA4CQ9C0C4 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
SEMA4CQ9C0C4 Z95118.1-201ENST00000421372 247 ntBASIC0.2□□□□□ -2.38
SEMA4CQ9C0C4 SCARNA21.1-201ENST00000515996 128 ntBASIC0.2□□□□□ -2.38
SEMA4CQ9C0C4 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms