Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.05□□□□□ -2.74
NKX6-2Q9C056 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.06□□□□□ -2.74
NKX6-2Q9C056 RNU6-400P-201ENST00000391173 106 ntBASIC-2.06□□□□□ -2.74
NKX6-2Q9C056 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.06□□□□□ -2.74
NKX6-2Q9C056 RNU6-394P-201ENST00000410735 107 ntBASIC-2.06□□□□□ -2.74
NKX6-2Q9C056 AC108019.1-201ENST00000512540 175 ntBASIC-2.06□□□□□ -2.74
NKX6-2Q9C056 U2.7-201ENST00000619197 100 ntBASIC-2.07□□□□□ -2.74
NKX6-2Q9C056 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.08□□□□□ -2.74
NKX6-2Q9C056 MIR1468-201ENST00000410600 86 ntBASIC-2.08□□□□□ -2.74
NKX6-2Q9C056 AC018880.2-201ENST00000414265 201 ntBASIC-2.08□□□□□ -2.74
NKX6-2Q9C056 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.08□□□□□ -2.74
NKX6-2Q9C056 MIR548C-201ENST00000384815 97 ntBASIC-2.09□□□□□ -2.74
NKX6-2Q9C056 MIR1236-201ENST00000408340 102 ntBASIC-2.09□□□□□ -2.74
NKX6-2Q9C056 MTND4LP9-201ENST00000427694 174 ntBASIC-2.09□□□□□ -2.74
NKX6-2Q9C056 RNU7-107P-201ENST00000459121 61 ntBASIC-2.09□□□□□ -2.74
NKX6-2Q9C056 RNU6-656P-201ENST00000516785 107 ntBASIC-2.09□□□□□ -2.74
NKX6-2Q9C056 RNU6-807P-201ENST00000516805 107 ntBASIC-2.09□□□□□ -2.74
NKX6-2Q9C056 MIR3144-201ENST00000579460 79 ntBASIC-2.09□□□□□ -2.74
NKX6-2Q9C056 SNORA63-201ENST00000363450 132 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 SNORD116-10-201ENST00000363791 102 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 RNU6-478P-201ENST00000363904 110 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 AL035461.1-201ENST00000421490 332 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 SNORD33.1-201ENST00000516213 88 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.1□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 RNU6-340P-201ENST00000364005 107 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 SCARNA23-201ENST00000516060 130 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 MIR4756-201ENST00000577874 78 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 MIR664B-201ENST00000626756 61 ntBASIC-2.11□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.12□□□□□ -2.75
NKX6-2Q9C056 RNU6-200P-201ENST00000364743 107 ntBASIC-2.12□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.12□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.12□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.13□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.13□□□□□ -2.75
NKX6-2Q9C056 RNU6-681P-201ENST00000364012 104 ntBASIC-2.13□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.13□□□□□ -2.75
NKX6-2Q9C056 RNU7-153P-201ENST00000516455 62 ntBASIC-2.13□□□□□ -2.75
NKX6-2Q9C056 AL627230.5-201ENST00000619807 58 ntBASIC-2.13□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.14□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.14□□□□□ -2.75
NKX6-2Q9C056 RNU6-458P-201ENST00000384179 107 ntBASIC-2.14□□□□□ -2.75
NKX6-2Q9C056 U6.58-201ENST00000613107 107 ntBASIC-2.14□□□□□ -2.75
NKX6-2Q9C056 MIR548A3-201ENST00000385297 97 ntBASIC-2.15□□□□□ -2.75
NKX6-2Q9C056 MTND5P41-201ENST00000517498 206 ntBASIC-2.15□□□□□ -2.75
NKX6-2Q9C056 MIR4503-201ENST00000582187 83 ntBASIC-2.15□□□□□ -2.75
NKX6-2Q9C056 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.16□□□□□ -2.76
NKX6-2Q9C056 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.16□□□□□ -2.76
NKX6-2Q9C056 RNU6-537P-201ENST00000517277 103 ntBASIC-2.16□□□□□ -2.76
NKX6-2Q9C056 AC004792.1-201ENST00000614523 137 ntBASIC-2.16□□□□□ -2.76
NKX6-2Q9C056 MIR3914-2-201ENST00000637339 95 ntBASIC-2.16□□□□□ -2.76
NKX6-2Q9C056 RNU6-645P-201ENST00000364649 106 ntBASIC-2.17□□□□□ -2.76
NKX6-2Q9C056 SNORD114-3-201ENST00000364969 75 ntBASIC-2.17□□□□□ -2.76
NKX6-2Q9C056 RNU6-880P-201ENST00000384526 107 ntBASIC-2.17□□□□□ -2.76
NKX6-2Q9C056 RNU7-61P-201ENST00000515897 61 ntBASIC-2.17□□□□□ -2.76
NKX6-2Q9C056 RNU6-904P-201ENST00000516206 101 ntBASIC-2.17□□□□□ -2.76
NKX6-2Q9C056 RNU6-79P-201ENST00000362511 107 ntBASIC-2.18□□□□□ -2.76
NKX6-2Q9C056 RNU6-574P-201ENST00000384265 107 ntBASIC-2.18□□□□□ -2.76
NKX6-2Q9C056 SNORA40-201ENST00000388090 126 ntBASIC-2.18□□□□□ -2.76
NKX6-2Q9C056 SNORD77.2-201ENST00000391045 68 ntBASIC-2.18□□□□□ -2.76
NKX6-2Q9C056 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.18□□□□□ -2.76
NKX6-2Q9C056 U4.2-201ENST00000618561 85 ntBASIC-2.18□□□□□ -2.76
NKX6-2Q9C056 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.19□□□□□ -2.76
NKX6-2Q9C056 RNU6-196P-201ENST00000384315 107 ntBASIC-2.19□□□□□ -2.76
NKX6-2Q9C056 RNU6-696P-201ENST00000390834 107 ntBASIC-2.19□□□□□ -2.76
NKX6-2Q9C056 AL117351.2-201ENST00000513571 157 ntBASIC-2.19□□□□□ -2.76
NKX6-2Q9C056 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.19□□□□□ -2.76
NKX6-2Q9C056 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.2□□□□□ -2.76
NKX6-2Q9C056 RNU6-630P-201ENST00000391258 106 ntBASIC-2.2□□□□□ -2.76
NKX6-2Q9C056 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.2□□□□□ -2.76
NKX6-2Q9C056 RNU6-257P-201ENST00000410238 98 ntBASIC-2.21□□□□□ -2.76
NKX6-2Q9C056 RNU6-327P-201ENST00000516270 127 ntBASIC-2.21□□□□□ -2.76
NKX6-2Q9C056 RNU6-608P-201ENST00000383927 104 ntBASIC-2.22□□□□□ -2.76
NKX6-2Q9C056 RNU6-162P-201ENST00000516228 103 ntBASIC-2.22□□□□□ -2.76
NKX6-2Q9C056 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.22□□□□□ -2.76
NKX6-2Q9C056 U6.95-201ENST00000636931 70 ntBASIC-2.22□□□□□ -2.76
NKX6-2Q9C056 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.23□□□□□ -2.77
NKX6-2Q9C056 RNU6-695P-201ENST00000391157 104 ntBASIC-2.23□□□□□ -2.77
NKX6-2Q9C056 RNU6-971P-201ENST00000516920 106 ntBASIC-2.23□□□□□ -2.77
NKX6-2Q9C056 RNU6-980P-201ENST00000516925 103 ntBASIC-2.23□□□□□ -2.77
NKX6-2Q9C056 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.23□□□□□ -2.77
NKX6-2Q9C056 MIR429-201ENST00000362106 83 ntBASIC-2.24□□□□□ -2.77
NKX6-2Q9C056 RNY4P27-201ENST00000363341 96 ntBASIC-2.24□□□□□ -2.77
NKX6-2Q9C056 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.24□□□□□ -2.77
NKX6-2Q9C056 RNU7-174P-201ENST00000516248 59 ntBASIC-2.24□□□□□ -2.77
NKX6-2Q9C056 MIR520D-201ENST00000385002 87 ntBASIC-2.25□□□□□ -2.77
NKX6-2Q9C056 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.25□□□□□ -2.77
NKX6-2Q9C056 RNU6-118P-201ENST00000516552 102 ntBASIC-2.25□□□□□ -2.77
NKX6-2Q9C056 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.26□□□□□ -2.77
NKX6-2Q9C056 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms