Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-995P-201ENST00000391244 107 ntBASIC-3.56□□□□□ -2.98
IFT140Q96RY7 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.56□□□□□ -2.98
IFT140Q96RY7 SNORD116-4-201ENST00000384733 96 ntBASIC-3.57□□□□□ -2.98
IFT140Q96RY7 MIR1236-201ENST00000408340 102 ntBASIC-3.57□□□□□ -2.98
IFT140Q96RY7 AC113195.1-201ENST00000579952 141 ntBASIC-3.57□□□□□ -2.98
IFT140Q96RY7 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.58□□□□□ -2.98
IFT140Q96RY7 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.58□□□□□ -2.98
IFT140Q96RY7 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.58□□□□□ -2.98
IFT140Q96RY7 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.59□□□□□ -2.98
IFT140Q96RY7 Y_RNA.435-201ENST00000384095 112 ntBASIC-3.59□□□□□ -2.98
IFT140Q96RY7 MIR4777-201ENST00000583710 86 ntBASIC-3.59□□□□□ -2.98
IFT140Q96RY7 U4.4-201ENST00000620626 117 ntBASIC-3.59□□□□□ -2.98
IFT140Q96RY7 RNU6-639P-201ENST00000384074 107 ntBASIC-3.6□□□□□ -2.99
IFT140Q96RY7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.6□□□□□ -2.99
IFT140Q96RY7 RNU6-460P-201ENST00000391158 108 ntBASIC-3.6□□□□□ -2.99
IFT140Q96RY7 SNORD63.2-201ENST00000516303 64 ntBASIC-3.6□□□□□ -2.99
IFT140Q96RY7 SNORD58A-201ENST00000383875 65 ntBASIC-3.6□□□□□ -2.99
IFT140Q96RY7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.6□□□□□ -2.99
IFT140Q96RY7 RNY3P8-201ENST00000411366 126 ntBASIC-3.61□□□□□ -2.99
IFT140Q96RY7 RNU6-918P-201ENST00000391219 106 ntBASIC-3.62□□□□□ -2.99
IFT140Q96RY7 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.63□□□□□ -2.99
IFT140Q96RY7 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.63□□□□□ -2.99
IFT140Q96RY7 AL158147.1-201ENST00000443970 75 ntBASIC-3.63□□□□□ -2.99
IFT140Q96RY7 MIR548V-201ENST00000584165 80 ntBASIC-3.63□□□□□ -2.99
IFT140Q96RY7 RNU6-669P-201ENST00000365575 107 ntBASIC-3.64□□□□□ -2.99
IFT140Q96RY7 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.64□□□□□ -2.99
IFT140Q96RY7 RNU6-795P-201ENST00000516323 103 ntBASIC-3.64□□□□□ -2.99
IFT140Q96RY7 SNORD77.2-201ENST00000391045 68 ntBASIC-3.65□□□□□ -2.99
IFT140Q96RY7 U6.104-201ENST00000637979 90 ntBASIC-3.65□□□□□ -2.99
IFT140Q96RY7 RNU6-230P-201ENST00000362457 104 ntBASIC-3.66□□□□□ -2.99
IFT140Q96RY7 RNU6-713P-201ENST00000384761 107 ntBASIC-3.66□□□□□ -2.99
IFT140Q96RY7 RNU6-972P-201ENST00000391208 107 ntBASIC-3.66□□□□□ -2.99
IFT140Q96RY7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.66□□□□□ -2.99
IFT140Q96RY7 SNORD116-16-201ENST00000384533 92 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 RNU7-197P-201ENST00000458836 62 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 Y_RNA.705-201ENST00000516862 110 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 RNU7-151P-201ENST00000516930 53 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 RNU6-988P-201ENST00000519081 107 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 MIR4679-2-201ENST00000578358 77 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 Y_RNA.11-201ENST00000362375 109 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 RNU7-153P-201ENST00000516455 62 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 AC012531.4-201ENST00000616509 177 ntBASIC-3.67□□□□□ -3
IFT140Q96RY7 MIR369-201ENST00000362155 70 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 RNY1P1-201ENST00000364372 112 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 SNORD113-2-201ENST00000391082 72 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 Y_RNA.609-201ENST00000410669 89 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 MTND2P23-201ENST00000422990 651 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 AL035470.1-201ENST00000622571 220 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 AC139792.2-201ENST00000624218 587 ntBASIC-3.68□□□□□ -3
IFT140Q96RY7 RNU4-11P-201ENST00000365287 132 ntBASIC-3.69□□□□□ -3
IFT140Q96RY7 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.69□□□□□ -3
IFT140Q96RY7 MIR630-201ENST00000384957 97 ntBASIC-3.69□□□□□ -3
IFT140Q96RY7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.69□□□□□ -3
IFT140Q96RY7 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.7□□□□□ -3
IFT140Q96RY7 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.7□□□□□ -3
IFT140Q96RY7 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.71□□□□□ -3
IFT140Q96RY7 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.71□□□□□ -3
IFT140Q96RY7 RNY3P1-201ENST00000365085 102 ntBASIC-3.71□□□□□ -3
IFT140Q96RY7 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.71□□□□□ -3
IFT140Q96RY7 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.71□□□□□ -3
IFT140Q96RY7 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.71□□□□□ -3
IFT140Q96RY7 RNU6-887P-201ENST00000410660 100 ntBASIC-3.71□□□□□ -3
IFT140Q96RY7 SNORD60-201ENST00000383903 83 ntBASIC-3.72□□□□□ -3
IFT140Q96RY7 SNORD1B-201ENST00000363091 84 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-3.73□□□□□ -3.01
IFT140Q96RY7 RNU6-982P-201ENST00000516216 102 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 MIR5009-201ENST00000578736 100 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 MIR3675-201ENST00000583661 73 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 RNU6-141P-201ENST00000410499 105 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 RNU6-523P-201ENST00000516304 54 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.73□□□□□ -3.01
IFT140Q96RY7 SNORD58C-201ENST00000365223 64 ntBASIC-3.74□□□□□ -3.01
IFT140Q96RY7 MIR579-201ENST00000385221 98 ntBASIC-3.74□□□□□ -3.01
IFT140Q96RY7 RNU6-537P-201ENST00000517277 103 ntBASIC-3.74□□□□□ -3.01
IFT140Q96RY7 MIR4760-201ENST00000585040 80 ntBASIC-3.74□□□□□ -3.01
IFT140Q96RY7 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.75□□□□□ -3.01
IFT140Q96RY7 AP001340.1-201ENST00000624405 217 ntBASIC-3.75□□□□□ -3.01
IFT140Q96RY7 SNORD116-10-201ENST00000363791 102 ntBASIC-3.76□□□□□ -3.01
IFT140Q96RY7 RNU6-694P-201ENST00000364071 147 ntBASIC-3.76□□□□□ -3.01
IFT140Q96RY7 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.76□□□□□ -3.01
IFT140Q96RY7 MIR581-201ENST00000384895 96 ntBASIC-3.76□□□□□ -3.01
IFT140Q96RY7 RNY4P18-201ENST00000391107 89 ntBASIC-3.76□□□□□ -3.01
IFT140Q96RY7 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.77□□□□□ -3.01
IFT140Q96RY7 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.78□□□□□ -3.01
IFT140Q96RY7 SNORD42.2-201ENST00000365570 69 ntBASIC-3.78□□□□□ -3.01
IFT140Q96RY7 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.78□□□□□ -3.01
IFT140Q96RY7 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.79□□□□□ -3.02
IFT140Q96RY7 RNU6-604P-201ENST00000390917 100 ntBASIC-3.79□□□□□ -3.02
IFT140Q96RY7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.79□□□□□ -3.02
IFT140Q96RY7 MIR7978-201ENST00000636158 59 ntBASIC-3.79□□□□□ -3.02
IFT140Q96RY7 RNA5SP215-201ENST00000363440 122 ntBASIC-3.8□□□□□ -3.02
IFT140Q96RY7 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.8□□□□□ -3.02
IFT140Q96RY7 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.8□□□□□ -3.02
IFT140Q96RY7 SNORA41B-201ENST00000384785 128 ntBASIC-3.8□□□□□ -3.02
IFT140Q96RY7 MIR513C-201ENST00000401352 84 ntBASIC-3.8□□□□□ -3.02
IFT140Q96RY7 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.81□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms