Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-5.79□□□□□ -3.34
VPS13AQ96RL7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-5.79□□□□□ -3.34
VPS13AQ96RL7 MIR4424-201ENST00000585257 86 ntBASIC-5.8□□□□□ -3.34
VPS13AQ96RL7 AC016911.1-201ENST00000613297 452 ntBASIC-5.81□□□□□ -3.34
VPS13AQ96RL7 RNU6-639P-201ENST00000384074 107 ntBASIC-5.81□□□□□ -3.34
VPS13AQ96RL7 SNORD116-24-201ENST00000384549 92 ntBASIC-5.81□□□□□ -3.34
VPS13AQ96RL7 RNU6-122P-201ENST00000516818 107 ntBASIC-5.81□□□□□ -3.34
VPS13AQ96RL7 RNU5B-4P-201ENST00000363508 111 ntBASIC-5.82□□□□□ -3.34
VPS13AQ96RL7 MIR5701-3-201ENST00000578890 82 ntBASIC-5.82□□□□□ -3.34
VPS13AQ96RL7 MIR5701-1-201ENST00000585138 82 ntBASIC-5.82□□□□□ -3.34
VPS13AQ96RL7 MIR5701-2-201ENST00000615634 82 ntBASIC-5.82□□□□□ -3.34
VPS13AQ96RL7 Y_RNA.359-201ENST00000365498 102 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 RNU6-510P-201ENST00000391239 108 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 MIRLET7A1-201ENST00000362295 80 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 Y_RNA.183-201ENST00000363882 113 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 Y_RNA.29-201ENST00000362570 113 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 RNU6-306P-201ENST00000384617 107 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 RNU6-578P-201ENST00000390980 103 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 MIR664A-201ENST00000626086 82 ntBASIC-5.83□□□□□ -3.34
VPS13AQ96RL7 Y_RNA.532-201ENST00000384590 113 ntBASIC-5.84□□□□□ -3.34
VPS13AQ96RL7 Y_RNA.96-201ENST00000363092 109 ntBASIC-5.85□□□□□ -3.35
VPS13AQ96RL7 RNU6-153P-201ENST00000364422 104 ntBASIC-5.85□□□□□ -3.35
VPS13AQ96RL7 MTND4LP30-201ENST00000454092 297 ntBASIC-5.85□□□□□ -3.35
VPS13AQ96RL7 AC080013.6-201ENST00000606185 215 ntBASIC-5.85□□□□□ -3.35
VPS13AQ96RL7 RNY3P2-201ENST00000362918 102 ntBASIC-5.86□□□□□ -3.35
VPS13AQ96RL7 RNU6-1192P-201ENST00000612197 107 ntBASIC-5.87□□□□□ -3.35
VPS13AQ96RL7 RNU6-489P-201ENST00000618289 107 ntBASIC-5.87□□□□□ -3.35
VPS13AQ96RL7 AC009161.1-201ENST00000417306 376 ntBASIC-5.87□□□□□ -3.35
VPS13AQ96RL7 MIR1321-201ENST00000637766 79 ntBASIC-5.87□□□□□ -3.35
VPS13AQ96RL7 AC083904.1-201ENST00000487828 231 ntBASIC-5.88□□□□□ -3.35
VPS13AQ96RL7 Y_RNA.772-201ENST00000606692 102 ntBASIC-5.88□□□□□ -3.35
VPS13AQ96RL7 RNU6-806P-201ENST00000365147 105 ntBASIC-5.89□□□□□ -3.35
VPS13AQ96RL7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-5.9□□□□□ -3.35
VPS13AQ96RL7 RNU6-211P-201ENST00000384047 107 ntBASIC-5.9□□□□□ -3.35
VPS13AQ96RL7 SNORD37.1-201ENST00000390968 65 ntBASIC-5.9□□□□□ -3.35
VPS13AQ96RL7 RNU6-887P-201ENST00000410660 100 ntBASIC-5.9□□□□□ -3.35
VPS13AQ96RL7 RNU6-38P-201ENST00000384085 107 ntBASIC-5.91□□□□□ -3.36
VPS13AQ96RL7 RNU6-895P-201ENST00000384125 103 ntBASIC-5.91□□□□□ -3.36
VPS13AQ96RL7 RNU6-892P-201ENST00000410335 99 ntBASIC-5.91□□□□□ -3.36
VPS13AQ96RL7 Y_RNA.720-201ENST00000517166 92 ntBASIC-5.91□□□□□ -3.36
VPS13AQ96RL7 AC015540.1-201ENST00000615828 501 ntBASIC-5.92□□□□□ -3.36
VPS13AQ96RL7 RNU6-236P-201ENST00000363886 106 ntBASIC-5.92□□□□□ -3.36
VPS13AQ96RL7 AL356010.1-201ENST00000456364 102 ntBASIC-5.93□□□□□ -3.36
VPS13AQ96RL7 SNORD5.1-201ENST00000458800 75 ntBASIC-5.93□□□□□ -3.36
VPS13AQ96RL7 RNU6-276P-201ENST00000516114 96 ntBASIC-5.93□□□□□ -3.36
VPS13AQ96RL7 RNU6-70P-201ENST00000516438 60 ntBASIC-5.93□□□□□ -3.36
VPS13AQ96RL7 Y_RNA.592-201ENST00000410274 109 ntBASIC-5.94□□□□□ -3.36
VPS13AQ96RL7 SEPT14P3-201ENST00000439401 183 ntBASIC-5.94□□□□□ -3.36
VPS13AQ96RL7 AL732372.2-207ENST00000445840 183 ntBASIC-5.94□□□□□ -3.36
VPS13AQ96RL7 SEPT14P2-201ENST00000453405 183 ntBASIC-5.94□□□□□ -3.36
VPS13AQ96RL7 FO082796.1-201ENST00000523795 183 ntBASIC-5.94□□□□□ -3.36
VPS13AQ96RL7 RNA5SP401-201ENST00000515920 127 ntBASIC-5.94□□□□□ -3.36
VPS13AQ96RL7 AP000240.1-201ENST00000609910 452 ntBASIC-5.94□□□□□ -3.36
VPS13AQ96RL7 Y_RNA.473-201ENST00000384333 102 ntBASIC-5.95□□□□□ -3.36
VPS13AQ96RL7 RNU6-1102P-201ENST00000516149 96 ntBASIC-5.95□□□□□ -3.36
VPS13AQ96RL7 AC016252.1-201ENST00000609721 474 ntBASIC-5.95□□□□□ -3.36
VPS13AQ96RL7 RNU6-59P-201ENST00000384787 107 ntBASIC-5.96□□□□□ -3.36
VPS13AQ96RL7 RNU5E-3P-201ENST00000515913 68 ntBASIC-5.96□□□□□ -3.36
VPS13AQ96RL7 RNU4-33P-201ENST00000364316 85 ntBASIC-5.96□□□□□ -3.36
VPS13AQ96RL7 Y_RNA.581-201ENST00000391017 97 ntBASIC-5.96□□□□□ -3.36
VPS13AQ96RL7 RNU6-381P-201ENST00000391259 108 ntBASIC-5.97□□□□□ -3.36
VPS13AQ96RL7 RNU6-275P-201ENST00000364910 107 ntBASIC-5.98□□□□□ -3.37
VPS13AQ96RL7 MIR1263-201ENST00000408324 86 ntBASIC-5.98□□□□□ -3.37
VPS13AQ96RL7 MIR3672-201ENST00000584290 82 ntBASIC-5.98□□□□□ -3.37
VPS13AQ96RL7 MIR628-201ENST00000385229 95 ntBASIC-5.98□□□□□ -3.37
VPS13AQ96RL7 RNU6-795P-201ENST00000516323 103 ntBASIC-5.99□□□□□ -3.37
VPS13AQ96RL7 MIR3938-201ENST00000582157 103 ntBASIC-5.99□□□□□ -3.37
VPS13AQ96RL7 MIR3149-201ENST00000584629 83 ntBASIC-5.99□□□□□ -3.37
VPS13AQ96RL7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-6□□□□□ -3.37
VPS13AQ96RL7 AL162413.1-201ENST00000603198 110 ntBASIC-6□□□□□ -3.37
VPS13AQ96RL7 SNORA25.1-201ENST00000362326 128 ntBASIC-6.01□□□□□ -3.37
VPS13AQ96RL7 AC116353.3-201ENST00000511215 249 ntBASIC-6.02□□□□□ -3.37
VPS13AQ96RL7 MIR5009-201ENST00000578736 100 ntBASIC-6.02□□□□□ -3.37
VPS13AQ96RL7 AC097520.1-201ENST00000624435 385 ntBASIC-6.02□□□□□ -3.37
VPS13AQ96RL7 Y_RNA.97-201ENST00000363094 102 ntBASIC-6.02□□□□□ -3.37
VPS13AQ96RL7 RNU6-659P-201ENST00000516454 104 ntBASIC-6.02□□□□□ -3.37
VPS13AQ96RL7 Y_RNA.686-201ENST00000516548 134 ntBASIC-6.02□□□□□ -3.37
VPS13AQ96RL7 MIR4484-201ENST00000582855 83 ntBASIC-6.02□□□□□ -3.37
VPS13AQ96RL7 AC099654.13-201ENST00000639774 207 ntBASIC-6.03□□□□□ -3.37
VPS13AQ96RL7 RNU6-996P-201ENST00000365438 107 ntBASIC-6.04□□□□□ -3.38
VPS13AQ96RL7 SNORA75.5-201ENST00000391291 81 ntBASIC-6.04□□□□□ -3.38
VPS13AQ96RL7 MIR548P-201ENST00000408336 84 ntBASIC-6.04□□□□□ -3.38
VPS13AQ96RL7 RNU6-1211P-201ENST00000459179 105 ntBASIC-6.04□□□□□ -3.38
VPS13AQ96RL7 ZNF519P2-201ENST00000557032 169 ntBASIC-6.04□□□□□ -3.38
VPS13AQ96RL7 RNU6-768P-201ENST00000384683 107 ntBASIC-6.05□□□□□ -3.38
VPS13AQ96RL7 RNU6-290P-201ENST00000365212 101 ntBASIC-6.05□□□□□ -3.38
VPS13AQ96RL7 RNU6-380P-201ENST00000410207 107 ntBASIC-6.05□□□□□ -3.38
VPS13AQ96RL7 RNU6-1050P-201ENST00000410388 107 ntBASIC-6.05□□□□□ -3.38
VPS13AQ96RL7 MIR3121-201ENST00000579680 77 ntBASIC-6.05□□□□□ -3.38
VPS13AQ96RL7 MIR16-2-201ENST00000362117 81 ntBASIC-6.07□□□□□ -3.38
VPS13AQ96RL7 DLEU2_1.2-201ENST00000614667 120 ntBASIC-6.07□□□□□ -3.38
VPS13AQ96RL7 MIR376A1-201ENST00000616574 68 ntBASIC-6.07□□□□□ -3.38
VPS13AQ96RL7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-6.07□□□□□ -3.38
VPS13AQ96RL7 Y_RNA.713-201ENST00000517013 96 ntBASIC-6.08□□□□□ -3.38
VPS13AQ96RL7 MIR3682-201ENST00000581338 84 ntBASIC-6.08□□□□□ -3.38
VPS13AQ96RL7 RNU6-195P-201ENST00000411352 109 ntBASIC-6.08□□□□□ -3.38
VPS13AQ96RL7 RNU6-1252P-201ENST00000363054 104 ntBASIC-6.09□□□□□ -3.38
VPS13AQ96RL7 RNY4P34-201ENST00000364779 95 ntBASIC-6.09□□□□□ -3.38
VPS13AQ96RL7 AC037487.3-201ENST00000606668 112 ntBASIC-6.1□□□□□ -3.39
VPS13AQ96RL7 Y_RNA.219-201ENST00000364232 113 ntBASIC-6.1□□□□□ -3.39
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms