Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AL691482.2-201ENST00000457453 84 ntBASIC-1.06□□□□□ -2.58
ZNF558Q96NG5 MIR4306-201ENST00000583390 91 ntBASIC-1.06□□□□□ -2.58
ZNF558Q96NG5 MIR3657-201ENST00000584818 117 ntBASIC-1.06□□□□□ -2.58
ZNF558Q96NG5 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.07□□□□□ -2.58
ZNF558Q96NG5 MTATP8P2-201ENST00000435212 202 ntBASIC-1.07□□□□□ -2.58
ZNF558Q96NG5 RNU6-313P-201ENST00000516317 112 ntBASIC-1.08□□□□□ -2.58
ZNF558Q96NG5 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.09□□□□□ -2.58
ZNF558Q96NG5 MIR203A-201ENST00000384836 110 ntBASIC-1.09□□□□□ -2.58
ZNF558Q96NG5 RNU7-153P-201ENST00000516455 62 ntBASIC-1.09□□□□□ -2.58
ZNF558Q96NG5 RNY1P9-201ENST00000532431 109 ntBASIC-1.09□□□□□ -2.58
ZNF558Q96NG5 AC090617.8-201ENST00000623339 167 ntBASIC-1.09□□□□□ -2.58
ZNF558Q96NG5 MIR2052-201ENST00000636055 55 ntBASIC-1.09□□□□□ -2.58
ZNF558Q96NG5 AC132825.6-201ENST00000638861 357 ntBASIC-1.09□□□□□ -2.58
ZNF558Q96NG5 RNU6-752P-201ENST00000516376 102 ntBASIC-1.1□□□□□ -2.59
ZNF558Q96NG5 RNA5SP147-201ENST00000516493 109 ntBASIC-1.1□□□□□ -2.59
ZNF558Q96NG5 MIR3910-1-201ENST00000580936 111 ntBASIC-1.1□□□□□ -2.59
ZNF558Q96NG5 RNA5SP192-201ENST00000364404 120 ntBASIC-1.11□□□□□ -2.59
ZNF558Q96NG5 AL450471.1-201ENST00000447509 127 ntBASIC-1.11□□□□□ -2.59
ZNF558Q96NG5 SNORD18.2-201ENST00000459604 70 ntBASIC-1.11□□□□□ -2.59
ZNF558Q96NG5 MIR3115-201ENST00000577915 68 ntBASIC-1.11□□□□□ -2.59
ZNF558Q96NG5 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.11□□□□□ -2.59
ZNF558Q96NG5 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.12□□□□□ -2.59
ZNF558Q96NG5 SNORA33.1-201ENST00000364957 130 ntBASIC-1.12□□□□□ -2.59
ZNF558Q96NG5 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.12□□□□□ -2.59
ZNF558Q96NG5 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.12□□□□□ -2.59
ZNF558Q96NG5 MIR519C-201ENST00000385053 87 ntBASIC-1.12□□□□□ -2.59
ZNF558Q96NG5 AL031737.1-201ENST00000450125 223 ntBASIC-1.12□□□□□ -2.59
ZNF558Q96NG5 snoU83B.1-201ENST00000517136 88 ntBASIC-1.12□□□□□ -2.59
ZNF558Q96NG5 RNU6-208P-201ENST00000362431 107 ntBASIC-1.13□□□□□ -2.59
ZNF558Q96NG5 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.13□□□□□ -2.59
ZNF558Q96NG5 SNORD115-27-201ENST00000364430 82 ntBASIC-1.13□□□□□ -2.59
ZNF558Q96NG5 SNORD113-1-201ENST00000365321 69 ntBASIC-1.13□□□□□ -2.59
ZNF558Q96NG5 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.13□□□□□ -2.59
ZNF558Q96NG5 SNORD57-201ENST00000448188 72 ntBASIC-1.13□□□□□ -2.59
ZNF558Q96NG5 MIR3165-201ENST00000579874 75 ntBASIC-1.13□□□□□ -2.59
ZNF558Q96NG5 SNORD114-17-201ENST00000364699 75 ntBASIC-1.14□□□□□ -2.59
ZNF558Q96NG5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
ZNF558Q96NG5 AL353803.5-201ENST00000599815 141 ntBASIC-1.14□□□□□ -2.59
ZNF558Q96NG5 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.15□□□□□ -2.59
ZNF558Q96NG5 RNU2-51P-201ENST00000410708 197 ntBASIC-1.15□□□□□ -2.59
ZNF558Q96NG5 RNU6-340P-201ENST00000364005 107 ntBASIC-1.16□□□□□ -2.6
ZNF558Q96NG5 MIR521-2-201ENST00000384818 87 ntBASIC-1.16□□□□□ -2.6
ZNF558Q96NG5 RNU6-706P-201ENST00000517229 104 ntBASIC-1.16□□□□□ -2.6
ZNF558Q96NG5 RNU6-633P-201ENST00000362612 103 ntBASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 RNU6-681P-201ENST00000364012 104 ntBASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 MIR124-2-201ENST00000385081 109 ntBASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 SNORD77.2-201ENST00000391045 68 ntBASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 MIR4464-201ENST00000580818 92 ntBASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 MIR6739-201ENST00000622461 75 ntBASIC-1.17□□□□□ -2.6
ZNF558Q96NG5 RNY4P18-201ENST00000391107 89 ntBASIC-1.18□□□□□ -2.6
ZNF558Q96NG5 MIR1255B2-201ENST00000408618 67 ntBASIC-1.18□□□□□ -2.6
ZNF558Q96NG5 CYP3A54P-201ENST00000566950 75 ntBASIC-1.18□□□□□ -2.6
ZNF558Q96NG5 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.19□□□□□ -2.6
ZNF558Q96NG5 MIR4668-201ENST00000582284 70 ntBASIC-1.19□□□□□ -2.6
ZNF558Q96NG5 MIR4320-201ENST00000636981 65 ntBASIC-1.19□□□□□ -2.6
ZNF558Q96NG5 MIR450A1-201ENST00000362262 91 ntBASIC-1.2□□□□□ -2.6
ZNF558Q96NG5 SNORD115-37-201ENST00000363768 82 ntBASIC-1.2□□□□□ -2.6
ZNF558Q96NG5 AC138207.3-201ENST00000585289 166 ntBASIC-1.2□□□□□ -2.6
ZNF558Q96NG5 AP001318.4-201ENST00000616637 121 ntBASIC-1.2□□□□□ -2.6
ZNF558Q96NG5 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.21□□□□□ -2.6
ZNF558Q96NG5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.21□□□□□ -2.6
ZNF558Q96NG5 RNU6-755P-201ENST00000364400 103 ntBASIC-1.22□□□□□ -2.6
ZNF558Q96NG5 AL445584.3-201ENST00000617173 78 ntBASIC-1.22□□□□□ -2.6
ZNF558Q96NG5 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.23□□□□□ -2.61
ZNF558Q96NG5 SNORA40.13-201ENST00000516379 120 ntBASIC-1.23□□□□□ -2.61
ZNF558Q96NG5 MIR6888-201ENST00000621977 67 ntBASIC-1.23□□□□□ -2.61
ZNF558Q96NG5 RNU6-624P-201ENST00000363411 107 ntBASIC-1.24□□□□□ -2.61
ZNF558Q96NG5 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.24□□□□□ -2.61
ZNF558Q96NG5 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.24□□□□□ -2.61
ZNF558Q96NG5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.24□□□□□ -2.61
ZNF558Q96NG5 SNORD116-22-201ENST00000384430 92 ntBASIC-1.25□□□□□ -2.61
ZNF558Q96NG5 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.25□□□□□ -2.61
ZNF558Q96NG5 SNX3P1X-201ENST00000414887 175 ntBASIC-1.25□□□□□ -2.61
ZNF558Q96NG5 RNU7-134P-201ENST00000458997 64 ntBASIC-1.25□□□□□ -2.61
ZNF558Q96NG5 AC093729.1-201ENST00000513074 128 ntBASIC-1.25□□□□□ -2.61
ZNF558Q96NG5 RNU7-154P-201ENST00000516194 62 ntBASIC-1.25□□□□□ -2.61
ZNF558Q96NG5 MALAT1.1-201ENST00000618249 95 ntBASIC-1.25□□□□□ -2.61
ZNF558Q96NG5 MIR29B1-201ENST00000385015 81 ntBASIC-1.26□□□□□ -2.61
ZNF558Q96NG5 AL035461.1-201ENST00000421490 332 ntBASIC-1.26□□□□□ -2.61
ZNF558Q96NG5 HLA-S-202ENST00000425174 53 ntBASIC-1.26□□□□□ -2.61
ZNF558Q96NG5 MIR8485-201ENST00000401372 91 ntBASIC-1.27□□□□□ -2.61
ZNF558Q96NG5 RNU6-497P-201ENST00000365316 104 ntBASIC-1.28□□□□□ -2.61
ZNF558Q96NG5 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.28□□□□□ -2.61
ZNF558Q96NG5 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.28□□□□□ -2.61
ZNF558Q96NG5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.28□□□□□ -2.61
ZNF558Q96NG5 RNU6-219P-201ENST00000364728 107 ntBASIC-1.29□□□□□ -2.62
ZNF558Q96NG5 MIR5591-201ENST00000578248 65 ntBASIC-1.29□□□□□ -2.62
ZNF558Q96NG5 RNA5SP461-201ENST00000516451 104 ntBASIC-1.3□□□□□ -2.62
ZNF558Q96NG5 MIR6818-201ENST00000621576 65 ntBASIC-1.3□□□□□ -2.62
ZNF558Q96NG5 RNU6-924P-201ENST00000362926 108 ntBASIC-1.31□□□□□ -2.62
ZNF558Q96NG5 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.31□□□□□ -2.62
ZNF558Q96NG5 AL603908.1-201ENST00000406098 201 ntBASIC-1.31□□□□□ -2.62
ZNF558Q96NG5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.31□□□□□ -2.62
ZNF558Q96NG5 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.31□□□□□ -2.62
ZNF558Q96NG5 RNU6-557P-201ENST00000516842 110 ntBASIC-1.31□□□□□ -2.62
ZNF558Q96NG5 MIR527-201ENST00000385244 85 ntBASIC-1.32□□□□□ -2.62
ZNF558Q96NG5 RNU6-576P-201ENST00000390854 102 ntBASIC-1.32□□□□□ -2.62
ZNF558Q96NG5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms