Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
SHISA4Q96DD7 Y_RNA.379-201ENST00000365653 102 ntBASIC0.9□□□□□ -2.27
SHISA4Q96DD7 CYP3A54P-201ENST00000566950 75 ntBASIC0.9□□□□□ -2.27
SHISA4Q96DD7 uc_338.10-201ENST00000621872 182 ntBASIC0.9□□□□□ -2.27
SHISA4Q96DD7 Y_RNA.246-201ENST00000364495 108 ntBASIC0.89□□□□□ -2.27
SHISA4Q96DD7 RNU6-520P-201ENST00000384717 104 ntBASIC0.89□□□□□ -2.27
SHISA4Q96DD7 MIR5706-201ENST00000579841 80 ntBASIC0.89□□□□□ -2.27
SHISA4Q96DD7 MIR140-201ENST00000385282 100 ntBASIC0.88□□□□□ -2.27
SHISA4Q96DD7 RNU6-231P-201ENST00000517122 103 ntBASIC0.88□□□□□ -2.27
SHISA4Q96DD7 SNORA40.16-201ENST00000517238 121 ntBASIC0.88□□□□□ -2.27
SHISA4Q96DD7 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
SHISA4Q96DD7 RNA5SP517-201ENST00000364724 117 ntBASIC0.87□□□□□ -2.27
SHISA4Q96DD7 SNORA63.6-201ENST00000364921 119 ntBASIC0.87□□□□□ -2.27
SHISA4Q96DD7 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
SHISA4Q96DD7 MIR516B1-201ENST00000385211 90 ntBASIC0.87□□□□□ -2.27
SHISA4Q96DD7 MIR4752-201ENST00000579672 72 ntBASIC0.87□□□□□ -2.27
SHISA4Q96DD7 SNORA70.25-201ENST00000612741 95 ntBASIC0.87□□□□□ -2.27
SHISA4Q96DD7 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.87□□□□□ -2.27
SHISA4Q96DD7 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
SHISA4Q96DD7 Y_RNA.282-201ENST00000364793 102 ntBASIC0.85□□□□□ -2.27
SHISA4Q96DD7 MIR519A2-201ENST00000384990 87 ntBASIC0.85□□□□□ -2.27
SHISA4Q96DD7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SHISA4Q96DD7 RNU1-29P-201ENST00000606574 126 ntBASIC0.85□□□□□ -2.27
SHISA4Q96DD7 U7.6-201ENST00000610841 64 ntBASIC0.85□□□□□ -2.27
SHISA4Q96DD7 Y_RNA.74-201ENST00000362911 99 ntBASIC0.84□□□□□ -2.27
SHISA4Q96DD7 RNU4-33P-201ENST00000364316 85 ntBASIC0.84□□□□□ -2.27
SHISA4Q96DD7 RNY1P8-201ENST00000383970 114 ntBASIC0.84□□□□□ -2.27
SHISA4Q96DD7 SNORD116.2-201ENST00000391251 93 ntBASIC0.84□□□□□ -2.27
SHISA4Q96DD7 SNORA40.8-201ENST00000411034 126 ntBASIC0.84□□□□□ -2.27
SHISA4Q96DD7 SNORD116-16-201ENST00000384533 92 ntBASIC0.83□□□□□ -2.28
SHISA4Q96DD7 RNU6-337P-201ENST00000391243 106 ntBASIC0.83□□□□□ -2.28
SHISA4Q96DD7 MIR548F3-201ENST00000408509 87 ntBASIC0.83□□□□□ -2.28
SHISA4Q96DD7 SNORD71-201ENST00000411292 86 ntBASIC0.83□□□□□ -2.28
SHISA4Q96DD7 HMGN2P22-201ENST00000427588 175 ntBASIC0.83□□□□□ -2.28
SHISA4Q96DD7 AC069271.1-201ENST00000445577 156 ntBASIC0.83□□□□□ -2.28
SHISA4Q96DD7 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
SHISA4Q96DD7 RNA5SP347-201ENST00000362445 119 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 SNORD118-201ENST00000363593 134 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 RNU6-110P-201ENST00000384508 104 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 MIR1255B2-201ENST00000408618 67 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 RNU6-518P-201ENST00000516056 96 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 SNORA25.18-201ENST00000607153 114 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 AC243829.3-201ENST00000622177 108 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 U6.96-201ENST00000636425 70 ntBASIC0.82□□□□□ -2.28
SHISA4Q96DD7 MIR20A-201ENST00000362279 71 ntBASIC0.81□□□□□ -2.28
SHISA4Q96DD7 SNORA2A-201ENST00000383885 135 ntBASIC0.81□□□□□ -2.28
SHISA4Q96DD7 AC244090.1-201ENST00000441884 93 ntBASIC0.81□□□□□ -2.28
SHISA4Q96DD7 RNU7-119P-201ENST00000459279 63 ntBASIC0.81□□□□□ -2.28
SHISA4Q96DD7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
SHISA4Q96DD7 RNU6-810P-201ENST00000364001 107 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 SNORA49-201ENST00000386157 136 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 RNU6-930P-201ENST00000390938 100 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 RNU6-229P-201ENST00000516614 102 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 MIR548X-201ENST00000580069 75 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 AC243829.6-201ENST00000612652 106 ntBASIC0.8□□□□□ -2.28
SHISA4Q96DD7 SNORD1B-201ENST00000363091 84 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 Y_RNA.109-201ENST00000363215 102 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 RNA5SP499-201ENST00000363982 119 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 SNORD2-201ENST00000459163 69 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 MIR4490-201ENST00000582647 84 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 MIR7110-201ENST00000612638 86 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 MIR6086-201ENST00000638065 55 ntBASIC0.79□□□□□ -2.28
SHISA4Q96DD7 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
SHISA4Q96DD7 MIR527-201ENST00000385244 85 ntBASIC0.78□□□□□ -2.28
SHISA4Q96DD7 AL021921.1-201ENST00000442774 93 ntBASIC0.78□□□□□ -2.28
SHISA4Q96DD7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SHISA4Q96DD7 SNORD114-29-201ENST00000364819 70 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 MIR518A1-201ENST00000385068 85 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 SNORA40B-201ENST00000385573 128 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 RNU6-848P-201ENST00000515948 107 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 RNU6-617P-201ENST00000516147 107 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 RNU6-473P-201ENST00000516164 107 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
SHISA4Q96DD7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
SHISA4Q96DD7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.76□□□□□ -2.29
SHISA4Q96DD7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.76□□□□□ -2.29
SHISA4Q96DD7 MIR545-201ENST00000385085 106 ntBASIC0.76□□□□□ -2.29
SHISA4Q96DD7 RNU6-172P-201ENST00000411000 93 ntBASIC0.76□□□□□ -2.29
SHISA4Q96DD7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
SHISA4Q96DD7 RNU6-924P-201ENST00000362926 108 ntBASIC0.75□□□□□ -2.29
SHISA4Q96DD7 RNU6-175P-201ENST00000516896 107 ntBASIC0.75□□□□□ -2.29
SHISA4Q96DD7 SNORD115-25-201ENST00000362619 82 ntBASIC0.74□□□□□ -2.29
SHISA4Q96DD7 MIR6773-201ENST00000612812 74 ntBASIC0.74□□□□□ -2.29
SHISA4Q96DD7 RNU6-246P-201ENST00000384702 107 ntBASIC0.73□□□□□ -2.29
SHISA4Q96DD7 RNU6-598P-201ENST00000364017 105 ntBASIC0.72□□□□□ -2.29
SHISA4Q96DD7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.72□□□□□ -2.29
SHISA4Q96DD7 MIR579-201ENST00000385221 98 ntBASIC0.72□□□□□ -2.29
SHISA4Q96DD7 RNU7-188P-201ENST00000517063 64 ntBASIC0.72□□□□□ -2.29
SHISA4Q96DD7 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
SHISA4Q96DD7 RNU6-838P-201ENST00000363399 108 ntBASIC0.71□□□□□ -2.3
SHISA4Q96DD7 RNU6-458P-201ENST00000384179 107 ntBASIC0.71□□□□□ -2.3
SHISA4Q96DD7 RNU6-863P-201ENST00000515989 104 ntBASIC0.71□□□□□ -2.3
SHISA4Q96DD7 RNU4-54P-201ENST00000516428 129 ntBASIC0.71□□□□□ -2.3
SHISA4Q96DD7 RNU6-419P-201ENST00000517030 63 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms